Details from NCBI annotation

Gene Symbol Sgce
Gene Name sarcoglycan, epsilon, transcript variant X5
Entrez Gene ID 101723078

Database interlinks

Part of NW_004624813.1 (Scaffold)

For more information consult the page for NW_004624813.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGCE ENSCPOG00000010672 (Guinea pig)

Gene Details

sarcoglycan, epsilon

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009578, Guinea pig)

Protein Percentage 99.13%
CDS Percentage 95.57%
Ka/Ks Ratio 0.02314 (Ka = 0.004, Ks = 0.1742)

SGCE ENSG00000127990 (Human)

Gene Details

sarcoglycan, epsilon

External Links

Gene Match (Ensembl Protein ID: ENSP00000398930, Human)

Protein Percentage 89.8%
CDS Percentage 87.29%
Ka/Ks Ratio 0.21436 (Ka = 0.0794, Ks = 0.3705)

Sgce ENSMUSG00000004631 (Mouse)

Gene Details

sarcoglycan, epsilon

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000111240, Mouse)

Protein Percentage 92.99%
CDS Percentage 88.16%
Ka/Ks Ratio 0.08309 (Ka = 0.0389, Ks = 0.4681)

Sgce ENSRNOG00000046905 (Rat)

Gene Details

sarcoglycan, epsilon (Sgce), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000064432, Rat)

Protein Percentage 94.68%
CDS Percentage 87.93%
Ka/Ks Ratio 0.05426 (Ka = 0.0288, Ks = 0.5301)

Genome Location

Sequence Coding sequence

Length: 1356 bp    Location: 1431933..1361772   Strand: -
>XM_004862699.1
ATGCAATTGCCCCGGTGGTGGGAGCTGGGAGACCCCTGTGCTTGGACGAGGCAGGGTCGGGGGACAAGAAGGATGAGCCCCGCGACCACTGGCACATTCTTACTGACAGTGTACACTATTTTCTCGAAGGTGCACTCTGACTGGAATGTGTACCCGTCTGCAGGTGTCCTCTTTGTTCATGTTTTGGAAAGAGAATATTTTAAGGGGGAATTTCCACCTTACCCAAAACCTGGTGAAATTAGTAATGATCCCATAACATTCAACACAAATTTAATGGGTTACCCAGACCGACCAGGATGGCTTCGATATATCCAAAGGACACCATATAGTGATGGAGTCTTATATGGGTCTCCAGCTGCTGAAAATGTGGGAAAACCAACAATCATTGAGATAACTGCCTACAATAGGCGAACCTTTGAGACTGCAAGGCATAATTTGATAATTAATATAATGTCAGCAGAAGACTTCCCGTTGCCATATCAAGCAGAATTCTTCGTTAAAAATATGAATGTGGAAGAAATGTTGGCCAGTGAGGTTCTTGGAGACTTCCTGGGCGCAGTTAAAAATGTGTGGCAGCCAGAGCGCCTGAATGCCATCAACATCACGTCAGCCCTAGACAGGGGTGGAAGGGTGCCGCTTCCCATTAATGACATGAAGGAAGGTGTTTATGTCATGGTTGGTGCCGATGTCCCATTTTCTTCTTGTTTACGAGAAGTTGAAAATCCACAGAATCAATTGAGATGCAGCCAAGAAATGGAGCCTGTAATAACCTGTGATAAAAAGTTTCGTACTCAATTTTACATTGATTGGTGCAAAATTTCACTGGTTGATAAAACAAAGCAAGTTTCCACCTATCAGGAAGTGATCCGAGGAGAGGGGATTTTACCTGATGGTGGAGAGTACAAACCCCCTTCTGATTCTTTGAAAAGCAGAGACTATTACACGGATTTCCTAATTACACTGGCTGTGCCCTCGGCAGTAGCACTGGTCCTCTTTCTAATACTTGCTTATATCATGTGCTGCCGACGGGAAGGAGTCATTCAGCTGGTCCATCACAGTGCTATTCAGAAATCTACCAAGGAGCTCCGAGATATGTCCAAGAACAGAGAGATAGCATGGCCCCTGTCAACACTGCCTGTGTTCCACCCGGTGACTGGGGAAATCATTCCGCCTCTGCACACAGACACCTATGATGGCACCAACATGCCACTGATGCAGACACAGCAGAACTTGCCGCATCAAACTCAGATTCCCCAACAGCAGAGTACAGGAGATTTTCGTTTGACAACTTTTCAAAGATTTGAGGTAAATGGTATCCCTGAAGAAAGGAAACTGACCGAGGCAATGAATTTATAA

Related Sequences

XP_004862756.1 Protein

Sgce PREDICTED: epsilon-sarcoglycan isoform X5 [Heterocephalus glaber]

Length: 451 aa      View alignments
>XP_004862756.1
MQLPRWWELGDPCAWTRQGRGTRRMSPATTGTFLLTVYTIFSKVHSDWNVYPSAGVLFVHVLEREYFKGEFPPYPKPGEISNDPITFNTNLMGYPDRPGWLRYIQRTPYSDGVLYGSPAAENVGKPTIIEITAYNRRTFETARHNLIINIMSAEDFPLPYQAEFFVKNMNVEEMLASEVLGDFLGAVKNVWQPERLNAINITSALDRGGRVPLPINDMKEGVYVMVGADVPFSSCLREVENPQNQLRCSQEMEPVITCDKKFRTQFYIDWCKISLVDKTKQVSTYQEVIRGEGILPDGGEYKPPSDSLKSRDYYTDFLITLAVPSAVALVLFLILAYIMCCRREGVIQLVHHSAIQKSTKELRDMSKNREIAWPLSTLPVFHPVTGEIIPPLHTDTYDGTNMPLMQTQQNLPHQTQIPQQQSTGDFRLTTFQRFEVNGIPEERKLTEAMNL