Details from NCBI annotation

Gene Symbol Snx19
Gene Name sorting nexin 19, transcript variant X1
Entrez Gene ID 101700976

Database interlinks

Part of NW_004624812.1 (Scaffold)

For more information consult the page for NW_004624812.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNX19 ENSCPOG00000005621 (Guinea pig)

Gene Details

sorting nexin 19

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005067, Guinea pig)

Protein Percentage 86.61%
CDS Percentage 89.39%
Ka/Ks Ratio 0.30539 (Ka = 0.0729, Ks = 0.2387)

SNX19 ENSG00000120451 (Human)

Gene Details

sorting nexin 19

External Links

Gene Match (Ensembl Protein ID: ENSP00000265909, Human)

Protein Percentage 83.91%
CDS Percentage 86.93%
Ka/Ks Ratio 0.31027 (Ka = 0.0928, Ks = 0.2991)

Snx19 ENSMUSG00000031993 (Mouse)

Gene Details

sorting nexin 19

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131895, Mouse)

Protein Percentage 79.94%
CDS Percentage 83.37%
Ka/Ks Ratio 0.2659 (Ka = 0.1163, Ks = 0.4374)

Snx19 ENSRNOG00000014719 (Rat)

Gene Details

sorting nexin 19 (Snx19), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020041, Rat)

Protein Percentage 79.89%
CDS Percentage 83.54%
Ka/Ks Ratio 0.28174 (Ka = 0.118, Ks = 0.4187)

Genome Location

Sequence Coding sequence

Length: 2982 bp    Location: 5381542..5328091   Strand: -
>XM_004862646.1
ATGAAGGCAGAGACCAAGCCTCCGACCCAGGAGACCCTACCTGAGTCCTGCTGTAACCTCTGTAATCTGTGGAGTAGCCGGAAGCTGATGGCTGTGGGGGTCTTGCTCGGCTGTATCCTGGTCATCCACCTTCTGGTCAATGTGTGGCTTCTGTGCCTTCTCTCTGCTTTATTCATGGTGCTGGGAGGGTGGCTGGGCTCCAGTGCCATTGTGGGCGCTTCAGGTCAACTGCACTTGGAACGCTTCATTCCAGTGGCCACCTGCCCTCCGTGTCCCGAGGCAGAAAGACAGCTGGAACAGGAGATCGACCGCACCATCCAGATGATTATTCGTGATTTTGTGTTATCCTGGTATCGTTCCGTGAGCCAGGAGCCAGCCTTTGAGGAAGAGATGGAAGCAGCCATGAAAGGGTTGGTACAGGAGCTTCGGAGGAGAATGGGCATGGTGGACACCCATGCTCTTGCCCAGAGGGTTCTGACTCTCTGTGGTTGTCACCTGCAGAGCTACATTCAGGCAAAGGAGGCCACTGAAGAGAAGCAGAGTAGCCCAGTTCAGCCTTCCCAGCTCTGGGAGGCGTACTGCCAGGCTACTGCCCCACATCCTGCTGTGCACAGCCCTAGTGCTGAGGTAACACATACACGTGGCATTGTGAATTTGTTGCTTCAAGGTCTGGTGCCCAAGCCCCACTTGGAAACTAGGACTGGACGCCATGTAGTGGTCGAACTCATTACTTGCAGTGTAATCTTACCACTGATCAACAAGCTGACAGATCCTGATTGGATCCACCTTATACTTGTGGGTATCTTTTCCAGGGCCAGAAATGATCCCGTACAAGCAGCTAAAACACTCTGCACCCCTGGTGCTCTGGAGCAACCCTCAGTGCCCATATCTCTGCCACTGATTCTTGAGGTGGAGAATCTGCCAAAAGGGAGAGACCCTTCCCCAGGAGCAGCCACAGTGCTTCTAAACTACAGTGAAGCAGGCCCTTCCCCCGAGATTGAAGAAGGCCATGAAGCTATAGAGGCAGATTTGGGTGGGTTGCTTGAAGAAAGAAAAGTAGGAAACAACTCATCTCATTTTCTGCACCCAAATATTCGAGGCCCCTTGTTCTTATGTGAAGACTCAGAGCTGGAGTCTCCCCTCTCTGAACTGGGTAAAGAAACCATCATGCTAATGACCCCAGGCAACTTCCTCTCTGACAGGATCCATGATGCTCTGTGTGCCCTAGAAGATACTCAGGTTCTGGATCCTAAGGATGGTGAGGGATCTGAGGGCACTGAAGGAACAGAGGCTGAGGAGGGTCCAGGGACAGAAACGGAGTCAGGTCTGCTGGTATCTGTGCTAAATTCCTGCCCAGAGATCCAGATTGACACTGCAGACAAGGAGGTAGAACAAGATGTCACCTCCCTTACAGCTTTGCTGGAAGAACCAGTAAAGACCTACCCTGCACGACCCTCGTGCTTAGAGAAGGATCTCACAGATGGTATGAATTCCCTGGATCCTACTTTGCCACAAGTGTCACTTTCCTCCTCTCCACCTGGTCCTCTCAGCTCAGGCACCTTCAGCTTTGAGCCCCTGAGCAGTCCAGATGGGCCAGTTGTCATCCAGAACCTTCGTATCACTGGCACCATTACTGCCCGAGAGCACAGTGGCACTGGATTCCACCCATACACGCTCTACACTGTGAAGTACGAGACAGCCCTTCACAGTGAGAACAGCAGTGCCCTGCAGCAGCTGGCCTACCACACTGTAAATCGCCGCTATCGGGAGTTCTTGAACCTGCAGACCCGTCTGGAGGAGAAACCAGATCTACGGAAGTTCATCAAAAATGTAAAGGGTCCAAAAAAGCTCTTTCCAGATCTTCCATTTGGAAACATGGACAGTGACAGAGTAGAAGCCCGTAAGAGCCTCCTGGAATCGTTCCTAAAGCAACTCTGTGCCATTCCTGAGATTGCTAACAGTGAGGAGGTACAAGAGTTCCTTGCTCTGAACACTGATGCTCGTATTGCGTTTGTCAAGAAACCGTTCCTGGTCTCTAGAATAGACAAGATGGTGGTGAGTGCCATCGTAGACACGTTGAAGACAGCGTTTCCTCGCTCTGAGCCCCAGAGCCCCACGGAGGAGCTGAGTGAGGCTGAGAATGAAAGCAAGCCACAGACAGAAGGCAAGAAGCCTAGCAAGCCGAGACTGAGGTTCTCATCCAGCAAAATTGCTCCAGCACTGCATGTGACAGAAGCACACGACAGGATTCTCTATTGTCTCCAGGAAAGCAATGCGGAGTCAGAGATCCTGTCCATGTCTGGAATGGAATCCTTTATTAAAAAGCAGACAGAATTACTGGAAATCCAATCAACAGGAGCCCCAGGACAAATCCCCAAGAGATATGTGGACAGTTGCTTGTCAGGTGCAGCTGTGCCAGCCCAAGACCTGAGCAGCAGTGATCCAGGAGCAGAGACAGAGTTAGCTGACACAGCCCTGGATCTGATCTTCTTGCTCTTGATGCAGCAGTGGAAATGGCTGTGCACTGAAAACATGCAGAAATGTCTCCATCTTGTCTTTGGAACCCTTGTTCAGAGGTGGCTAGAGGTGCAGGTGGCTAATCTAACATGTCCACAGCACTGGGTGCAGTACCTCCAGCTTCTTCAAGAGTCCATCTGGCCCGGTGGAGTCTTGCCTAAGCTTCCACGACCTGTGAGGACTCAGGACCAGAAGGTGGCTACTGAGAAACAGGCTTTGCAGAGCCTTATGGGAATCCTGCCAGATTTTTTAGTAGAAATCCTAGGAGTGAACAAATGCCAGCTGAGCTGGAGGCTTGTTTTGGAGTCCCTACAGCAACCCCTCATCAACAGACATTTGATTTTCTGCCTTGGTGACATCATCCTGGAGTTCCTGGGTCTCTGTGCCTCTGCTGAAGACTCTGCCTCAACCACCACCTCCTCAGATGCCCCACACAGCCCCAAGAGGACGGGTCTCCCCTCTTAG

Related Sequences

XP_004862703.1 Protein

Snx19 PREDICTED: sorting nexin-19 isoform X1 [Heterocephalus glaber]

Length: 993 aa      View alignments
>XP_004862703.1
MKAETKPPTQETLPESCCNLCNLWSSRKLMAVGVLLGCILVIHLLVNVWLLCLLSALFMVLGGWLGSSAIVGASGQLHLERFIPVATCPPCPEAERQLEQEIDRTIQMIIRDFVLSWYRSVSQEPAFEEEMEAAMKGLVQELRRRMGMVDTHALAQRVLTLCGCHLQSYIQAKEATEEKQSSPVQPSQLWEAYCQATAPHPAVHSPSAEVTHTRGIVNLLLQGLVPKPHLETRTGRHVVVELITCSVILPLINKLTDPDWIHLILVGIFSRARNDPVQAAKTLCTPGALEQPSVPISLPLILEVENLPKGRDPSPGAATVLLNYSEAGPSPEIEEGHEAIEADLGGLLEERKVGNNSSHFLHPNIRGPLFLCEDSELESPLSELGKETIMLMTPGNFLSDRIHDALCALEDTQVLDPKDGEGSEGTEGTEAEEGPGTETESGLLVSVLNSCPEIQIDTADKEVEQDVTSLTALLEEPVKTYPARPSCLEKDLTDGMNSLDPTLPQVSLSSSPPGPLSSGTFSFEPLSSPDGPVVIQNLRITGTITAREHSGTGFHPYTLYTVKYETALHSENSSALQQLAYHTVNRRYREFLNLQTRLEEKPDLRKFIKNVKGPKKLFPDLPFGNMDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFLVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAENESKPQTEGKKPSKPRLRFSSSKIAPALHVTEAHDRILYCLQESNAESEILSMSGMESFIKKQTELLEIQSTGAPGQIPKRYVDSCLSGAAVPAQDLSSSDPGAETELADTALDLIFLLLMQQWKWLCTENMQKCLHLVFGTLVQRWLEVQVANLTCPQHWVQYLQLLQESIWPGGVLPKLPRPVRTQDQKVATEKQALQSLMGILPDFLVEILGVNKCQLSWRLVLESLQQPLINRHLIFCLGDIILEFLGLCASAEDSASTTTSSDAPHSPKRTGLPS