Details from NCBI annotation

Gene Symbol Rpusd4
Gene Name RNA pseudouridylate synthase domain containing 4, transcript variant X1
Entrez Gene ID 101711493

Database interlinks

Part of NW_004624812.1 (Scaffold)

For more information consult the page for NW_004624812.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPUSD4 ENSCPOG00000014971 (Guinea pig)

Gene Details

RNA pseudouridylate synthase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013493, Guinea pig)

Protein Percentage 87.73%
CDS Percentage 90.22%
Ka/Ks Ratio 0.38913 (Ka = 0.0743, Ks = 0.1911)

RPUSD4 ENSG00000165526 (Human)

Gene Details

RNA pseudouridylate synthase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000298317, Human)

Protein Percentage 83.02%
CDS Percentage 87.27%
Ka/Ks Ratio 0.35721 (Ka = 0.0985, Ks = 0.2756)

Rpusd4 ENSMUSG00000032044 (Mouse)

Gene Details

RNA pseudouridylate synthase domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000034543, Mouse)

Protein Percentage 79.84%
CDS Percentage 82.14%
Ka/Ks Ratio 0.26853 (Ka = 0.1284, Ks = 0.4782)

Rpusd4 ENSRNOG00000011567 (Rat)

Gene Details

RNA pseudouridylate synthase domain containing 4 (Rpusd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015670, Rat)

Protein Percentage 81.17%
CDS Percentage 81.96%
Ka/Ks Ratio 0.23108 (Ka = 0.122, Ks = 0.5278)

Genome Location

Sequence Coding sequence

Length: 1134 bp    Location: 366378..356561   Strand: -
>XM_004862586.1
ATGGCGGCGCCCAGGTATAGTGCACCTGTCCTCTGGGTCCGGGGTACCAGCCCGGTTTTGAAGAGTCTCTTTACTCTTGACTCAAAGCCATTTTGTTCCACCGCTGCTGCATCCAGGCCCCTGAGTGCCCAACAATTAGCGGAGAAACTCCGAGCCCAGAAAAGGGAACAAAAGACGAAGAAGCAGCCGGTGCCCACAACCCCTGTTCAGCGGAGGGTGCAAGAACTAGTGCGGTTCACACAGCAGTTGCAACGAGTTCATCCCAACGTTCTTGCTAAGGCACTGAGCCGAGGGATTCTCCACCAGGACAAGGACCTTGTGGTCATCAATAAGCCCTACGGTCTCCCTGTCCATGGTGGCCCTGGAGTCCAGCTCTGCATCAGTGAAGTATTGCCCATTCTGGCAAAGATGTTTCATGGCCATAAGGCAGAGCCCTTGCATCTGTGTCACCGGCTAGACAAGGAAACCACAGGTGTAATGGTGCTGGCTTGGGAGAAGGAAGTAGCACATCAAGTTCAAGAGCTATTTAGAACCCGTCAAGTGGAAAAGAAGTACTGGGCTGTCACTGTGCGTGTCCCCGTGCCCTCGGCAGGAGTCGTTGATATCCCCATCATTGAGAAGGAGGTGCAAGGGCAGCAGCAGCACCACAAGATGACACTGTGCCCGAGCTACCGCATGGACAATGGGAAGATGGTGAAGGTGCGGACCAGCCGCAATGCCCAGATTGCTGTAACTCAGTACCAGGTGCTCAGCAGCACTGTGTCCTCTGCCCTCGTGGAGCTCCACCCTGTTACTGGAATAAAACATCAGCTTCGAGTTCACCTGTCTTTTGGATTGGATTGTCCAGTCCTTGGTGATCACAAGTACTCAGACTGGAATAGGTTGGCTCCCCAGAAGCTTCCTATTGGCACCCTGAAGAACCTGGGACTGAAACAGTCAAAGGCTCGCTACATCCCCCTCCACCTGCATGCCCGGCAGCTGATCCTGCCTCCCCTGGGGTCCAGGAAGGAGGAACTCCAGTTGGTCTGCAGACTTCCTCACTTCTTTGTACATTCCCTGCACCGCTTGGGTTTAGAGATGCCAAATCAAAATGAAAATGAACACAATGAAGCCAGGCCGCTGGGAGCACAGTGA

Related Sequences

XP_004862643.1 Protein

Rpusd4 PREDICTED: RNA pseudouridylate synthase domain-containing protein 4 isoform X1 [Heterocephalus glaber]

Length: 377 aa      View alignments
>XP_004862643.1
MAAPRYSAPVLWVRGTSPVLKSLFTLDSKPFCSTAAASRPLSAQQLAEKLRAQKREQKTKKQPVPTTPVQRRVQELVRFTQQLQRVHPNVLAKALSRGILHQDKDLVVINKPYGLPVHGGPGVQLCISEVLPILAKMFHGHKAEPLHLCHRLDKETTGVMVLAWEKEVAHQVQELFRTRQVEKKYWAVTVRVPVPSAGVVDIPIIEKEVQGQQQHHKMTLCPSYRMDNGKMVKVRTSRNAQIAVTQYQVLSSTVSSALVELHPVTGIKHQLRVHLSFGLDCPVLGDHKYSDWNRLAPQKLPIGTLKNLGLKQSKARYIPLHLHARQLILPPLGSRKEELQLVCRLPHFFVHSLHRLGLEMPNQNENEHNEARPLGAQ