Details from NCBI annotation

Gene Symbol Cep78
Gene Name centrosomal protein 78kDa, transcript variant X3
Entrez Gene ID 101716112

Database interlinks

Part of NW_004624811.1 (Scaffold)

For more information consult the page for NW_004624811.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CEP78 ENSCPOG00000009445 (Guinea pig)

Gene Details

centrosomal protein 78kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008479, Guinea pig)

Protein Percentage 86.01%
CDS Percentage 87.95%
Ka/Ks Ratio 0.25242 (Ka = 0.0787, Ks = 0.3119)

CEP78 ENSG00000148019 (Human)

Gene Details

centrosomal protein 78kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000365782, Human)

Protein Percentage 85.45%
CDS Percentage 89.02%
Ka/Ks Ratio 0.28222 (Ka = 0.0755, Ks = 0.2677)

Cep78 ENSMUSG00000041491 (Mouse)

Gene Details

centrosomal protein 78

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037596, Mouse)

Protein Percentage 77.72%
CDS Percentage 80.71%
Ka/Ks Ratio 0.22337 (Ka = 0.132, Ks = 0.5911)

Cep78 ENSRNOG00000014041 (Rat)

Gene Details

centrosomal protein 78 (Cep78), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018951, Rat)

Protein Percentage 76.57%
CDS Percentage 80.88%
Ka/Ks Ratio 0.25661 (Ka = 0.1392, Ks = 0.5426)

Genome Location

Sequence Coding sequence

Length: 2352 bp    Location: 5658322..5698770   Strand: +
>XM_004862543.1
ATGATCGACTCGGTGAAGCTGCGCCGCGAGAGCGCGGCCGACTTTTTCTCGCACTACGAGTACCTGTGCGCGCTGCAGGACTCGGTGCCGCTGCCCGCCGTGCGCGCCTGCCTCCGGGAGGGCGTGCTGGACTTCAACGCCGACCGCCTCCGCGTGGTGGACTGGGCGCCGCTGCTGAGCACCCTCAAGACCAACAAAGACCTGCCCCTCATCTCCATCCGGAGCTGCTTCCAGCCGTGGCTTGGGGAAACAGGTTCTAACATAAATAAGGTTTACAGAAGTCGTGTTCCTGCGATAAGATCCAAAGATGTGACCTTCCAGTTATGTAGAGCTCTTAAAGGCTGTTTAAATATATCAAGCATGCTGAGGAACCTGGAACTAAATGGACTCCTTCTGAGAGAGAGAGATTTAACTATTTTAACAAAGGGATTGAATAAATCAACTTCATTGGTGCACCTGTCTCTTGCAAATTGCCCAATTGGAGATGGAGGTTTAGAAATTATTTGTCAAGGAATAAAGAACTCTGTCACTCTTAAGACAGTCAACTTCACGGAGTGTAATCTGACGTGGCAAGGAGCAGGTCACATGGCCAAGATATTAAAGTACCAGGCATTGAGAAGGCATGAGGAGACATGGGCTGAGAGCCTTCGCTATAGGAGGCCTGATCTTGACTGCATGGCTGGCCTGAGGCGCATCACATTGAACTGCAACACATTTGTTGGGGACCTGGGTGCACGTGCTTTTGCGGACTCTCTTAATGAGGATTTATGGCTTAGAGCACTTGACCTGCAACAGTGCGGCCTCACCAGTGATGGAGCCCAGGCTTTACTAGAGGCCCTGGAAACCAACAGAACTCTGGTGGTTCTGGATATAAGAAAAAACCCACTCATTGATCATTCTATGATGAAAGCAGTTATCAAAAAAGTTCTCCAGAACGGAAGGAGTGCTAAGTCAGAGTACCAGTGGATGACTTCTCCATCAGTGAAAGAATCACCTAAAACTGCTAAACAGAAAAAGAGAACTATAATTCTAGGAAGTAGTCGAAAAGGAAAAGCTACTATTAGAATTGGATTGGCTACCAAGAAAGCTGCAAGTAGTGGAAGAAAATATACCCGTGCTAAAGAGTGCTATGCTCCTGAACCTCTCCCACCCGGTGTGTCTGGTTTCTTGCCATGGCGAACTGCAGAACGTGCTAAGAGAAGCAGGGGTTTTCCATTAATCAAAACTCGAGATGTACCTAATCAGCTGCAGCCATCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCAGAAATTGATGAGATAGATGATTCTTCAGAAAGTGTTCATGAAGTGCCAGAGCAAACCAGTGTAAAACACGAAGCCTTGCAGGAAAAACTGGACGATTGCCTAAAGCAGTTGAAGGAGGAAAGAGTAATAAGGCTTAAGGCTGATAAACGAGTCAGTGAGCTAGAAAATGAAAATGCCCAATTAAGAAATATAAACTTCTCTTTGTCTGAAGCCCTTCATGCACAGTCGTTGACAAACATGATCCTGGATGATGAAGGTGTTTTGGGAAGCATTGAGAATTCTTTTCAGAAGTTCCATGCTTTCCTGGATCTTCTTAAAGATGCTGGACTTGGGCAGCTTGCCACAATGGCTGGAATAGATCAGTCAGATTTTCATTTATTAGGTCGTCCCCAGATGAATTCTACTGTTAGTGATCCACCTGAAGAAGAAAAGAAGGCACTTGAAGAAGAGAGACCTGATCCAAAGCAGAGTGCTGTAGGACAAATGCAAAATATCCAATTTCAGAAAATTACAGGTGATGCTAGAATTCCTTTGCCTCTTGACTCTTTCCACATCCCAGTTTCTACTCAGGAAACCATTGTAACTTCCAGAGACAACCTGGGAACCCCAAACCCTGAGCAGCAGCAGCAGGACTCTTTTGAAGGATTCATTGCTAGAACATGTTCTCCTTCAGCAGATAAGATTGCTGGAACTGGAGACGAGGAGTTGTCTAGAAATAGCAGATCACCTTCAGAGAAAATGACCAGAGCAGGTGACAATACCAAAAAACACTCTGCTAAGAAACATCCTGGAAAGGACCTACATTCCTATTCTGACTCTTCTATAAGCTGGAAAAACAAAGGAACTAAGGAAAATGTTTCTTTAGTTAATGAACCAATCAAAAGTGAGTCTTGGAAAAAACATATTTCTGTCAAGAAAGAAAGTAGAATAGTAACTGTTTCATCCAAGACAAATAAAAGTAAAAACAATCCACTAGAACATTCTGAAAGTGATACTCTTGGATCCGACTCTGAAATTCAAGAAAGCATCCATTCTCTATCACGTTTGACATAG

Related Sequences

XP_004862600.1 Protein

Cep78 PREDICTED: centrosomal protein of 78 kDa-like isoform X3 [Heterocephalus glaber]

Length: 783 aa      View alignments
>XP_004862600.1
MIDSVKLRRESAADFFSHYEYLCALQDSVPLPAVRACLREGVLDFNADRLRVVDWAPLLSTLKTNKDLPLISIRSCFQPWLGETGSNINKVYRSRVPAIRSKDVTFQLCRALKGCLNISSMLRNLELNGLLLRERDLTILTKGLNKSTSLVHLSLANCPIGDGGLEIICQGIKNSVTLKTVNFTECNLTWQGAGHMAKILKYQALRRHEETWAESLRYRRPDLDCMAGLRRITLNCNTFVGDLGARAFADSLNEDLWLRALDLQQCGLTSDGAQALLEALETNRTLVVLDIRKNPLIDHSMMKAVIKKVLQNGRSAKSEYQWMTSPSVKESPKTAKQKKRTIILGSSRKGKATIRIGLATKKAASSGRKYTRAKECYAPEPLPPGVSGFLPWRTAERAKRSRGFPLIKTRDVPNQLQPSGFPVTVTVESPSSSEIDEIDDSSESVHEVPEQTSVKHEALQEKLDDCLKQLKEERVIRLKADKRVSELENENAQLRNINFSLSEALHAQSLTNMILDDEGVLGSIENSFQKFHAFLDLLKDAGLGQLATMAGIDQSDFHLLGRPQMNSTVSDPPEEEKKALEEERPDPKQSAVGQMQNIQFQKITGDARIPLPLDSFHIPVSTQETIVTSRDNLGTPNPEQQQQDSFEGFIARTCSPSADKIAGTGDEELSRNSRSPSEKMTRAGDNTKKHSAKKHPGKDLHSYSDSSISWKNKGTKENVSLVNEPIKSESWKKHISVKKESRIVTVSSKTNKSKNNPLEHSESDTLGSDSEIQESIHSLSRLT