Details from NCBI annotation

Gene Symbol Gcnt1
Gene Name glucosaminyl (N-acetyl) transferase 1, core 2
Entrez Gene ID 101713056

Database interlinks

Part of NW_004624811.1 (Scaffold)

For more information consult the page for NW_004624811.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GCNT1 ENSCPOG00000013671 (Guinea pig)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018304, Guinea pig)

Protein Percentage 91.37%
CDS Percentage 88.73%
Ka/Ks Ratio 0.09808 (Ka = 0.042, Ks = 0.4284)

GCNT1 ENSG00000187210 (Human)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000415454, Human)

Protein Percentage 85.28%
CDS Percentage 84.74%
Ka/Ks Ratio 0.15679 (Ka = 0.0845, Ks = 0.5386)

Gcnt1 ENSMUSG00000038843 (Mouse)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000133935, Mouse)

Protein Percentage 81.07%
CDS Percentage 82.09%
Ka/Ks Ratio 0.17955 (Ka = 0.1133, Ks = 0.6312)

Gcnt1 ENSRNOG00000050534 (Rat)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2 (Gcnt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066013, Rat)

Protein Percentage 82.48%
CDS Percentage 82.87%
Ka/Ks Ratio 0.1793 (Ka = 0.1063, Ks = 0.5929)

Genome Location

Sequence Coding sequence

Length: 1287 bp    Location: 3967960..3970908   Strand: +
>XM_004862533.1
ATGCTGAGGAATTTGTTACGAAGGAGACTTTTTTCTTATCCCACTAAATACTACTTTATGGTTCTTGTTTTATCCCTAGTTACATTCACTGTCTTAAGAATTCATCAGAAGCTTGAATTTGTAAGCCTCAGACACTTGGAACTTGATGGAGAAAATCTTAGTAATAATATTAATTGCACCAAAATTTTACAGGGTGATGCAGATGAAATCCAGAAGGTGAAGCTTGAAATGCTAACAGCAAAATTTAGAAAACGCCCTCGGTGGACACCATCTGACTATATCAACATGACCAGTGACTGTACCTCTTTCATCAAGATGCGCAAATACATCATGGAACCCCTTGGTAAAGAGGAGGCAGGCTTCCCAATTGCATATTCCATAGTGGTTCATCATAAAATTGAAATGCTTGACAGGCTCCTAAGGGCCATTTATATGCCTCAGAATTTCTACTGCATCCATGTGGACAGAAAATCAGAGGACTCTTTTATAGCTGCAGTGAAGGGCATTGCATCCTGTTTCAGGAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTCTATGCTTCGTGGAGTCGAGTTCAGGCTGACCTCAACTGCATGAAGGACCTCTACAGAAGGAGCACAGAGTGGAAGTACTTGATCAATCTTTGTGGGATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGTCGTTCATGGGTGAAAACAACCTGGAAACAGAGAAGATGCCATCTCATAAAGCAGAAAGGTGGAAAAAACATTATGAAATCATCGATGGAAGGCTAATGGACACCAGGAACCCCAAAACACAGCCTCCTCTCAAAACACCTCTTTTCTCAGGCAGTGCCTATTTTGTGGTCAGTAGGGAGTATGTGGGCTACGTGCTAGAAAATGAAGACATCCAGAAGTTCATGGAGTGGGCGAAAGACACGTACAGCCCAGATGAGTATCTCTGGGCCACCATCCAAAGGATCCCCGAGGCCCCGGGCTCTCTACCCTTGAGCCACAAGTATGACCTGTCTGACATGCAGGCTGTTGCCAGGTTTGTCAAGTGGCAATACTTTGAAGGTGATGTTAACAAGGGCGCACCCTATCCACCCTGTGATGGTGTCCATGTGCGCAGCGTGTGTGTTTTTGGAGCTGGTGACTTAACCTCGATGTTACGCAAACACCACTTTTTTGCCAATAAGTTCGATGTTGATGTCGATGTCTTTGCCATCCAGTGTTTGGATGAGCATCTGAGGCATAAAGCCCTGGAGATGTTAGAACGCTGA

Related Sequences

XP_004862590.1 Protein

Gcnt1 PREDICTED: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [Heterocephalus glaber]

Length: 428 aa      View alignments
>XP_004862590.1
MLRNLLRRRLFSYPTKYYFMVLVLSLVTFTVLRIHQKLEFVSLRHLELDGENLSNNINCTKILQGDADEIQKVKLEMLTAKFRKRPRWTPSDYINMTSDCTSFIKMRKYIMEPLGKEEAGFPIAYSIVVHHKIEMLDRLLRAIYMPQNFYCIHVDRKSEDSFIAAVKGIASCFRNVFVASQLESVVYASWSRVQADLNCMKDLYRRSTEWKYLINLCGMDFPIKTNLEIVRKLKSFMGENNLETEKMPSHKAERWKKHYEIIDGRLMDTRNPKTQPPLKTPLFSGSAYFVVSREYVGYVLENEDIQKFMEWAKDTYSPDEYLWATIQRIPEAPGSLPLSHKYDLSDMQAVARFVKWQYFEGDVNKGAPYPPCDGVHVRSVCVFGAGDLTSMLRKHHFFANKFDVDVDVFAIQCLDEHLRHKALEMLER