Details from NCBI annotation

Gene Symbol Trpm6
Gene Name transient receptor potential cation channel, subfamily M, member 6, transcript variant X4
Entrez Gene ID 101707911

Database interlinks

Part of NW_004624811.1 (Scaffold)

For more information consult the page for NW_004624811.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRPM6 ENSCPOG00000011221 (Guinea pig)

Gene Details

transient receptor potential cation channel, subfamily M, member 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010089, Guinea pig)

Protein Percentage 70.18%
CDS Percentage 74.67%
Ka/Ks Ratio 0.31915 (Ka = 0.2317, Ks = 0.7261)

TRPM6 ENSG00000119121 (Human)

Gene Details

transient receptor potential cation channel, subfamily M, member 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000354006, Human)

Protein Percentage 85.73%
CDS Percentage 85.57%
Ka/Ks Ratio 0.18242 (Ka = 0.0837, Ks = 0.4586)

Trpm6 ENSMUSG00000024727 (Mouse)

Gene Details

transient receptor potential cation channel, subfamily M, member 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000037443, Mouse)

Protein Percentage 84.18%
CDS Percentage 83.57%
Ka/Ks Ratio 0.14692 (Ka = 0.0901, Ks = 0.6132)

TRPM6 ENSRNOG00000013053 (Rat)

Gene Details

Protein Trpm6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017892, Rat)

Protein Percentage 83.97%
CDS Percentage 83.33%
Ka/Ks Ratio 0.13834 (Ka = 0.0892, Ks = 0.6448)

Genome Location

Sequence Coding sequence

Length: 3159 bp    Location: 2494584..2408022   Strand: -
>XM_004862523.1
ATGAAAACCCAGCCCACGGTGGAGGGCCTCCAGTCCCAGAAATCTTGGATTGAAGGAGTGTTCAACAAGAGAGAATGTAACAAGGTCATACCCAGTCCAAAAGACCCTCACAGATGTGCTCCAGGCTGCCAAGTCTGCCAGAATTTAATCAGGTGCTACTGTGGCCGATTGGTTCATGACCACCATGGAATAGATTATGCCTGGTCCCTCTCAACTGCCAAGGAAAATGAAAATGAGCAATGGTCTGTTGAAAAGCACACAGTGAAAAGCCCTACAGATACCTTTGGCACTATTAATTTCCAAGATGGAGAACACATCTACCACTCCAAGTACATTCGGACTTCTTATGACACCAGGGTGAACCATCTGTTTCGTTTGATGTTGGAAGAGTGGAAGATGGAGCTGCCCAAGCTGGTGATATCCGTCCATGGAGGTGTCCAGAACTTTAAGATGTCCTCCAAGCTTAAAGAGATCTTCAGCCAGGGTTTGGTCAAAGCTGCAGAGACAACGGGAGCGTGGATAATAACGGCAGGCATCAACACGGGAGTTTCCAAGCATGTTGGGGATGCCCTGAAAACCCATTCCTCTAAGTCTTTGAGAAAAATCTGCACAGTTGGAATCCCTCCTTGGGGTGTCATTGAGAACCAGAGAGATCTTATTGGAAAAGATGTGGTGTGCATGTACCAGATGCTGGGTAGCCCCATCAGCAAGCTCACCACGCTCAACTGCATGCACTCTCATTTCATCCTGTCTGATGATGGCACTGTGGGCAAGTACGGAAATGAAATAAAGCTCAGGAGGAACCTGGAGAAGTACCTGTCCCTGCAGAAAATACACAGCCGCTCAAGACAAGGGGTGCCCGTGGTGGGGCTGGTGGTGGAAGGAGGTCCCAGTGTCATCTTCTCGGTGTGGGAGACCGTCAAGGATGAAGACCCCGTGGTGGTGTGTGAGGGCACGGGCAGAGCTGCCGACCTGCTGGCCTTCACCCACAAGCACTTAGCCGATGAGGGGACTCTGCGTCCCCAGGTAAAAGAGGAGATCATCTCTATGATTCAGAACACTTTCAACTTCAGTCTCAAACAATCCAAGCACCTTTTTCAAATTCTAATGGAGTGTATGGTGTACAAGGATTCTATTACCATATTTGATGCTGATTCTGAAGAACAGCAAGACCTGGACTTAGTAATTCTGACAGCACTGCTGAAGGGCACAAACTTATCAGCACTGGAGCAACTAAATCTAGCGGTGGCTTGGGACAGGTTGGACATTGCCAAGAAACACATCTTAATTTGTGGACAACATTGGAAGCCTGGCATGCTAGAACAAGCGATGTTAGATGCTTTGGTGATGGATCGAGTGGATTTTGTGAAGCTCTTAATTGAAAATGGAGTGACGCTTCATCGCTTTCTTACCATCCCCAGATTGGAAGAGCTCTATAATACAAAACAGGGGCCAACTAATATGCTCTTGCATCATCTTGTCCAAGACGTGAAACAGCATACTCTTCTTTCTGGCTACAAAATAACACTGATTGACATTGGACTGGTAGTAGAATACCTCATTGGTGGAGCCTACCGCAGCAGCTATACTAGGAAAACTTTCAGAGTCCTGTACAACAACCTCTATAGAAAACAGAAGAGTGTGACCAGCTTAGGTCAGAGCCTTTCCCAGCACTCCCTTCACCAGAGGCACTCTTTAGAAAATAGAAGAGAGTCCGAAGAAAGCACACTGCATTCCCAGTTCTGCAGAACGGCCCAGCCCTGCAAACTCAAGGAAAAGTCTGGAGTCCCTCATAAATCAAGGAACAAGTCAAAAGAAAGACAAGATATATTAGATGACCTCGAGTCTACTGGCTTTACTTACCCATACAATGACCTGCTGGTTTGGGCTGTGCTAATGAAGAGGCAGAAGATGGCCATGTTCTTTTGGCAGCATGGAGCAGAGGCCACAGTTAAGGCTGTGATTGCTTGTATCCTTTACCGAGCGATGGCCCGTGAAGCTAAGGAGAGCAACATGGTGGACGATACCTCAGAAGAGCTGAAAAATTACTCAAAGCAGTTTGGCCAGTTGGCCCTGGATGTGCTAGAGAAGGCATTTAAGCAGAACGAACCCATGGCCATGAAGCTCTTGACGTACGAACTTAAGAACTGGAGCAATTCCACCTGCTTGAAATTGGCTGTGTCTGGAGGGTTGCACCCTTTTGTTTCGCATTCTTGTACCCAAATGCTGCTGACAGACATGTGGGTGGGGCGTCTGAAGATGAGGAAGCACTCCTGGTTGAAGATCATCATAAGTATTCTTTTACCACCCACCATTTTGACACTGGAATTTAAAAGCAAAGCTGAGATGTCACATGTTCCCCAGTCCCAGGATTTCCAGTTTACATGGTATTACAGCGACCAGAGCCTCAGCAATGCCAAAGAGAATGCTTGTACGAAAGACTGTGATTTGGAAAGGGGCCCTGATGAGAAACTGGATGAAAGTCAGCACTTTGATCTAAGGAATGGGCCCCAAAGCCTTCCCTGGACCAGGAAGGTGTATGAGTTCTACAGCGCCCCTATTGTCAAGTTTTGGTTCTACACGATGGCATACTTGGCATTCCTCATGCTGTTCACTTACACTGTGTTGGTGGAGATGCAGCCCCAACCCAGCGTGCAAGAGTGGCTTGTTATCTGTTACATCTTCTCCAGTGCTATTGAGAGAGTCAGGGAGATTTGTATTTCAGAACCTGAGAATTTTACCCAAAAGGTGAAGGTGTGGATTAGCGAGTACTGGAACCTAATGGAGGCTGTGGCTATTGGTCTGTTTTCAGTTGGTTTTTGCCTCCGGTGGGGTGACCCTCCTTTTTACACAGTGGGAAGACTCATCTACTGCATTGACACCATCTTCTGGTTCTCACGGCTCATGGACTTCTTCGCTGTGAACCAACATGCAGGCCCGTATGTCACCATGATCGCAAAAATGAGTGCAAACATGTTCTACATTGTGATCATCATGGCCATCGTCCTGCTGAGCTTCGGAGTGGCGCGCAAAGCCATCCTTTCACCCCAGGAGCCTCCGTCTTGGACGCTTGCTCGAGACGTTGTGTTTGAGCCATACTGGATGATGTATGGGGAGGTCTACGCTTCGAAGATAGATGCAACGTTTATCTGGATATGA

Related Sequences

XP_004862580.1 Protein

Trpm6 PREDICTED: transient receptor potential cation channel subfamily M member 6-like isoform X4 [Heterocephalus glaber]

Length: 1052 aa      View alignments
>XP_004862580.1
MKTQPTVEGLQSQKSWIEGVFNKRECNKVIPSPKDPHRCAPGCQVCQNLIRCYCGRLVHDHHGIDYAWSLSTAKENENEQWSVEKHTVKSPTDTFGTINFQDGEHIYHSKYIRTSYDTRVNHLFRLMLEEWKMELPKLVISVHGGVQNFKMSSKLKEIFSQGLVKAAETTGAWIITAGINTGVSKHVGDALKTHSSKSLRKICTVGIPPWGVIENQRDLIGKDVVCMYQMLGSPISKLTTLNCMHSHFILSDDGTVGKYGNEIKLRRNLEKYLSLQKIHSRSRQGVPVVGLVVEGGPSVIFSVWETVKDEDPVVVCEGTGRAADLLAFTHKHLADEGTLRPQVKEEIISMIQNTFNFSLKQSKHLFQILMECMVYKDSITIFDADSEEQQDLDLVILTALLKGTNLSALEQLNLAVAWDRLDIAKKHILICGQHWKPGMLEQAMLDALVMDRVDFVKLLIENGVTLHRFLTIPRLEELYNTKQGPTNMLLHHLVQDVKQHTLLSGYKITLIDIGLVVEYLIGGAYRSSYTRKTFRVLYNNLYRKQKSVTSLGQSLSQHSLHQRHSLENRRESEESTLHSQFCRTAQPCKLKEKSGVPHKSRNKSKERQDILDDLESTGFTYPYNDLLVWAVLMKRQKMAMFFWQHGAEATVKAVIACILYRAMAREAKESNMVDDTSEELKNYSKQFGQLALDVLEKAFKQNEPMAMKLLTYELKNWSNSTCLKLAVSGGLHPFVSHSCTQMLLTDMWVGRLKMRKHSWLKIIISILLPPTILTLEFKSKAEMSHVPQSQDFQFTWYYSDQSLSNAKENACTKDCDLERGPDEKLDESQHFDLRNGPQSLPWTRKVYEFYSAPIVKFWFYTMAYLAFLMLFTYTVLVEMQPQPSVQEWLVICYIFSSAIERVREICISEPENFTQKVKVWISEYWNLMEAVAIGLFSVGFCLRWGDPPFYTVGRLIYCIDTIFWFSRLMDFFAVNQHAGPYVTMIAKMSANMFYIVIIMAIVLLSFGVARKAILSPQEPPSWTLARDVVFEPYWMMYGEVYASKIDATFIWI