Sequence details NCBI ID: XM_004862466.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zcchc6
Gene Name zinc finger, CCHC domain containing 6, transcript variant X6
Entrez Gene ID 101726471

Database interlinks

Part of NW_004624809.1 (Scaffold)

For more information consult the page for NW_004624809.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZCCHC6 ENSCPOG00000002500 (Guinea pig)

Gene Details

zinc finger, CCHC domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002278, Guinea pig)

Protein Percentage 87.14%
CDS Percentage 89.92%
Ka/Ks Ratio 0.28432 (Ka = 0.0691, Ks = 0.2432)

ZCCHC6 ENSG00000083223 (Human)

Gene Details

zinc finger, CCHC domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000365130, Human)

Protein Percentage 84.8%
CDS Percentage 87.88%
Ka/Ks Ratio 0.27055 (Ka = 0.0846, Ks = 0.3126)

Zcchc6 ENSMUSG00000035248 (Mouse)

Gene Details

zinc finger, CCHC domain containing 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071623, Mouse)

Protein Percentage 79.3%
CDS Percentage 81.08%
Ka/Ks Ratio 0.21308 (Ka = 0.1299, Ks = 0.6096)

Zcchc6 ENSRNOG00000016629 (Rat)

Gene Details

Protein Zcchc6

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022373, Rat)

Protein Percentage 78.6%
CDS Percentage 80.64%
Ka/Ks Ratio 0.2107 (Ka = 0.1327, Ks = 0.6298)

Genome Location

Sequence Coding sequence

Length: 4512 bp    Location: 11030403..11094754   Strand: +
Raw sequence   
>XM_004862466.1
ATGGGAGATGCAGTAAAACCTTATATTGTGAAGGGCACTAAAGGCCGAGGAACTGTTGATGATGATGATTTCAGAAGGGGTTACCTCCAACAAGATTATTTAATAATGGATGATTATGTTAAGGGCCATAGCAGTAAAATGGAAAAGGGCCTACCAAAAAAAAAGATAACACCTGGGAACTATGGTAATACACCCAGAAAAGGACCATATCCTGTTTCCAGCAATCCATATGCATTTAAAAACCCAATCTACAGTCAGCCCGTTCGGATGAATGACAGCCACAAAGATCAGTGTAAGAGATGGCTATTTGATGAAGTTACTGGTAACTCAGACAATTGGAGAGAATTCAAACCCGGACCTAGAATTCCTGTCACAAGCCGTCCAAGAAAAGACTCCTTTCAAGAAAGTGAGGATGGTTACAGGTGGCAGGATGGAAGAGGCTGCCGTACTGTGAGACGCCTGTTTCCCAAAGACCTGACAAGCCTGGAGACCATGTCAGAACTGGAAGCTGGGAGTCCTGAAAACAAGAAACAGCGGTCCCGACCCAGGAAGCCACGGAGGACTAGAAATGAGAAATATGAACAAGATGGAGAATTAGACGGTCCTGTGATTGACGAGTCTGTACTTTCCACAAAGGAGCTGCTGGGCTTACAGCAGGCTGAGGAGCGGTTGAAGAGAGACTTCATTGACAGGCTAAAAAGGAGACCACGAAACTGCCCTACAGCAAAGTACACCTGCAAACTCTGTGATGTTTTAATTGAATCTGTTGCATTTGCTCATAAGCATATCAAAGAGAAGAGGCACAAGAAAAACATGAAGGAAAAGCAGGAGGAAGAGTTGCTCACTACATTACCCCTACCAACACCCTCTCAGATAAATGCAGTTGGCATTGCTATTGACAAAGTGGTGCAGGAGTTCGGCTTACACAATGAGAACTTGGAACAGAGGCTAGAAATTAAACGCATCATGGAAGACGTGTTCCAGCACAAGCTACGAGATTGTTCTCTAAGATTATATGGGTCTTCCTGTAGCCGATTGGGTTTCAAAAATTCGGATGTAAATATTGACATTCAATTTCCAGCCATTATGTCTCAACCAGATGTCCTCTTACTTGTTCAAGAATGTTTAAAAAACAGTGACGCCTTCACTGATGTTGATGCTGATTTCCATGCTAGGGTACCAGTGGTGGTGTGCAGAGAGAAGCAAAGTGGTCTTCTTTGTAAAGTGAGCGCAGGAAATGAAAGTGCTTGCCTGACAACAAAGCACTTATCTATCCTTGGAAAACTAGAACCAAAGCTGGTTCCTCTGGTGATCGCATTTAGGTACTGGGCAAAGCTTTGCAGTATAGACTGCCCTGAAGAAGGAGGCCTACCGCCTTATGTGTTCGCCCTGATGGCTGTTTTCTTTCTTCAGCAGAGGAAGGAACCTCTTCTGCCAGTTTATCTAGGATCATGGGTTGATGGATTCTCATTAAACAAACTAGGGAACTTCAACCTTAAAGCCATAGAGGATGATTCTGTGATCTGGGAATATACCAGTAATGCTGCAGGGGACACAAACGCAGCCAAAGAAGAGGCACCAAAAGAAATGCCTGTCAGAAGGGGGCAGGTGTCATTAACGTTTGAAGTAAAACACCAGCCTTCAGTACCAGTTGGGCAGCTCTGGGTGGAGTTGCTGCGATTCTATGCTTTAGAATTTAATCTGGCTGATTTAGTGATAAGTATTCGTGTCAAAGAATCAATATCTCGGGAATCAAAGGATTGGCCTAAAAAGCGCATTGCCATTGAAGATCCCTACTCGGTTAAGAGAAATGTGGCAAGGACCCTAAATAATCAACCTGTGTTTGAATATATACTTCATTGTTTAAGGACAACATATAAATATTTTGCTCTTCCACACAAAGTTGGAAAATCCAGTCTTCCAAAGCCTCTCAGCCCAGTTTCATGTATTTCAGAACATTCTAAAGAAGTAGTAAATTATGATCCAGATGTACAACCAAAAGATGATAAGCTCAGAAACTCAGTTTTGACTCAAAGTCCTGGTGCTACTACCACTTCAACTGCCAATACCGGAAAGACACAGCCACTGTCTCTTAAAGAGATGACAAAAAGCTTTGGAAGCCTACCAGCAGAAGAAGTGGGAAATGACCATATCACCATCTGTCTAGAAGACTCAAGCTGTGACCAGGGACAAGTAGAAAGAGGAAGTAAAAATGAGAAAGAGAAAATCGAAAAGGAGGGCAAGTGTCCTTTGACTACCCATGTTCAAAGTCTAAGCAGTAGTAAGTATGGTGAGCTTGTAGCCTGTGGCAGTACACATATTTATGAGACAGATGGCGCTTTGGAGTTAGAAGACCTCCAGAATCCTATGGGTAAAAAATGTGATGGATTTTCTACTTTAGATGGTAAGACCAATGTTGAAGAAAGTATAGAAGGTGCCAGTGAACTAGAAGACTCTGTAGACTACATTGCCCCTTTAATCCAAGGCCAGACATCAGAAATCAATCCGTTTGATGAAGAGGAGGAGGAAGATGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAACCACCCAGACTCACCATTAACCGAGGGGAAGCTGAGGATGGCACTGCTAATGAAGATGAGTTTGGCAACACCTATGCTGGATCAGGGGATGAGGATGCCCAGTCTGAAGAGGAGGATGATGAATTAGTTGGCCCTACTAACCATGAAGACTTGAAAGAATGTGGAAAACATGTAGATGGAGCTCTACTCATGGAACTTAATAAAATAAATCTTAAAGGGGAAAAGGCACAAGAGGAAAATTCACCTGTGGATCAGTCTGATTTCATCTATGAATTTAGTAAACTTATCTTCACCAAAGGCAAGTCTCCCACGGTAGTATGCAACTTATGTAAACGAGAAGGCCATCTAAAAAAGGACTGTCCTGAAGACTTCAAAAGAATCCAGCTGGAACCTTTGCCACCACTAACACCCAAGTTTTCATATATCTTAGATCAAGTTTGCATCCAGTGTTACAAGGATTTTTCTCCAAGTACTTCAGAAGAGCAGGCTCGTGAACATATTCGACAAAACCTAGAGAGTTTCATAAGACAAGACTTTCCAGGAACTAAATTGAGCTTGTTTGGCTCCTCGAAAAATGGATTTGGGTTCAAACAGAGTGACCTTGACGTCTGTATGACAATTAATGGACATGAAACTGCTGAGGGGTTAGACTGTGTAAGAACTATTGAAGAATTGGCAAGAGTCCTCAGAAAACATTCAGGTTTGAGAAACATCCTACCTATTACAACAGCAAAGGTGCCAATTGTGAAATTCTTCCATTTGAGAAGTGGTCTGGAAGTGGATATCAGTTTATATAACACATTGGCCCTTCATAACACAAGACTTTTATGTGCTTACTCAGCCATTGATCTTAGAGTGAAATATTTATGTTATACTATGAAAGTATTTACAAAGATGTGCGATATTGGTGACGCTTCCAGGGGCAGCCTGTCGTCCTACGCGTACACTCTCATGGTGCTGTATTTCCTCCAGCAGCGGAGCCCACCAGTCATTCCCGTCCTGCAGGAGATATACAGAGGTGAAAAGAAACCTGAAATATTTGTTGATGGCTGGAATATTTATTTTTTTGATCAAATAGATGAACTGCCTACCTATTGGCCAGAATATGGGAAAAATACAGAATCTGTTGGGCAGCTATGGCTGGGACTTCTTCGTTTCTACACAGAGGAATTTGACTTTAAAGAGCATGTTATTAGCATCAGGAGAAAAAGCCTGCTTACAACTTTTAAGAAACAGTGGACCTCGAAATACATTGTTATTGAAGATCCTTTTGATTTGAATCATAATCTTGGAGCTGGATTATCAAGGAAAATGACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAGAGTATTTGGAATTCCAGTCAAAGGATTTCCAAAGGACTACCCCTCAAAAATGGAATACTTTTTTGATCCAGATGTACTAACTGAAGGAGAGCTGGCCCCAAATGATAGATGCTGTCGAATTTGTGGGAAAATTGGACACTTCATGAAGGACTGTCCCATGAGGAGAAAAGTCAGAAGACGGCGAAATCAGGAAGATACTCTGCACCAAAGATATCCTGAGAACAAAGACAAAAAAAGCAAGGAGGAGAAAGAAATTCAAAACAAGTACGCAGAAAGGGAGGTATCAGCAAAAGAAGATAAGTCTGTGCCATGTGCAGCTCAGAAAGCCAAAACTGTGAGGGCAGCTGTTGACCCGGGGAGGGAGAAGATTCTCAGGCCACTCATGGAAAAATGGAAGAGGCAGGACAATAAAGACTTAAGAGAAAAGTGCTGTTTCATTTGTGGAAGAGAAGGGCACATTAGAAAAGAATGTCCACAGCTTAAAGTCTCTGCAGGTAGCCTTTCCAGTAAATACACGACTCAGGGAAAAGCCTCAGCGAAGAGGAGCCCACAGGAATCGTGA

Related Sequences

XP_004862523.1 Protein

Zcchc6 PREDICTED: terminal uridylyltransferase 7 isoform X6 [Heterocephalus glaber]

Length: 1503 aa      View alignments
>XP_004862523.1
MGDAVKPYIVKGTKGRGTVDDDDFRRGYLQQDYLIMDDYVKGHSSKMEKGLPKKKITPGNYGNTPRKGPYPVSSNPYAFKNPIYSQPVRMNDSHKDQCKRWLFDEVTGNSDNWREFKPGPRIPVTSRPRKDSFQESEDGYRWQDGRGCRTVRRLFPKDLTSLETMSELEAGSPENKKQRSRPRKPRRTRNEKYEQDGELDGPVIDESVLSTKELLGLQQAEERLKRDFIDRLKRRPRNCPTAKYTCKLCDVLIESVAFAHKHIKEKRHKKNMKEKQEEELLTTLPLPTPSQINAVGIAIDKVVQEFGLHNENLEQRLEIKRIMEDVFQHKLRDCSLRLYGSSCSRLGFKNSDVNIDIQFPAIMSQPDVLLLVQECLKNSDAFTDVDADFHARVPVVVCREKQSGLLCKVSAGNESACLTTKHLSILGKLEPKLVPLVIAFRYWAKLCSIDCPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWVDGFSLNKLGNFNLKAIEDDSVIWEYTSNAAGDTNAAKEEAPKEMPVRRGQVSLTFEVKHQPSVPVGQLWVELLRFYALEFNLADLVISIRVKESISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFALPHKVGKSSLPKPLSPVSCISEHSKEVVNYDPDVQPKDDKLRNSVLTQSPGATTTSTANTGKTQPLSLKEMTKSFGSLPAEEVGNDHITICLEDSSCDQGQVERGSKNEKEKIEKEGKCPLTTHVQSLSSSKYGELVACGSTHIYETDGALELEDLQNPMGKKCDGFSTLDGKTNVEESIEGASELEDSVDYIAPLIQGQTSEINPFDEEEEEDEEEEEEEEEEEEEEEEEEEEEEPPRLTINRGEAEDGTANEDEFGNTYAGSGDEDAQSEEEDDELVGPTNHEDLKECGKHVDGALLMELNKINLKGEKAQEENSPVDQSDFIYEFSKLIFTKGKSPTVVCNLCKREGHLKKDCPEDFKRIQLEPLPPLTPKFSYILDQVCIQCYKDFSPSTSEEQAREHIRQNLESFIRQDFPGTKLSLFGSSKNGFGFKQSDLDVCMTINGHETAEGLDCVRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLCAYSAIDLRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQEIYRGEKKPEIFVDGWNIYFFDQIDELPTYWPEYGKNTESVGQLWLGLLRFYTEEFDFKEHVISIRRKSLLTTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDYPSKMEYFFDPDVLTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRNQEDTLHQRYPENKDKKSKEEKEIQNKYAEREVSAKEDKSVPCAAQKAKTVRAAVDPGREKILRPLMEKWKRQDNKDLREKCCFICGREGHIRKECPQLKVSAGSLSSKYTTQGKASAKRSPQES