Sequence details NCBI ID: XM_004862352.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vgll1
Gene Name vestigial like 1 (Drosophila)
Entrez Gene ID 101714456

Database interlinks

Part of NW_004624808.1 (Scaffold)

For more information consult the page for NW_004624808.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VGLL1 ENSCPOG00000010499 (Guinea pig)

Gene Details

vestigial like 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009429, Guinea pig)

Protein Percentage 79.23%
CDS Percentage 84.87%
Ka/Ks Ratio 0.36854 (Ka = 0.1227, Ks = 0.333)

VGLL1 ENSG00000102243 (Human)

Gene Details

vestigial like 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000359668, Human)

Protein Percentage 61.63%
CDS Percentage 74.29%
Ka/Ks Ratio 0.66106 (Ka = 0.2896, Ks = 0.4381)

Vgll1 ENSMUSG00000031131 (Mouse)

Gene Details

vestigial like 1 homolog (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033465, Mouse)

Protein Percentage 42.32%
CDS Percentage 57.43%
Ka/Ks Ratio 0.50668 (Ka = 0.5534, Ks = 1.0921)

Genome Location

Sequence Coding sequence

Length: 936 bp    Location: 10611756..10583416   Strand: -
Raw sequence   
>XM_004862352.1
ATGGAAGAGATGAAGAAGACTGACACCCAGCTGCCCACGAGTCGGCAGAAGCCTATAAAGACTGAATGGAATTCCAGGAGTGTCCTTTTCACCTATTTCCAGGGGGACATCAGCAGTGAAGTGGATGAGCACTTCTCCAGAGCTCTGAGTAATATTAAGCGGCCCCAGGAATTGAGCCCCTCGAGCCAGAGTGAAGAAGTGATCCTAAAGAATGATAGTGACATGCCTCCGAATCATTGGCGTTTCTCTTCTCCATGGACAAAGCCACGGCCAGAAGCATCCCTTGCCACTCCTGCCACCAGCAGCAGATTGAGTGTGTGTGATCCTATGGCTATGGATCATTACCCACTGGCCCTGCCTGAGACCTCCTCTGCTCAGCCTAGGGAGCTGTGGCACTTCCCTTCTCTGGCAACCCCCAGCTCCCCAGAGCCTGGCTACTCTCAAGCATTTCCCAGTGCGCACCTGGCTCCAGGGCCTCACCCTGGTAGGAAATGTGAGCCCTTCCTAAGTTTCCTCCAGCAGGACAGATGCTTAACTTGTCCTCCGGAAACTGCCATGAGAGAAGATTACAACCCTGTCCAGATAGCCGGAAGCACAGGACTGCTCTTCAACCTGCCTCCCAGCTCAGTCCACTGTAAAAAAGTATATGTCTCCCCGAGTCATGGACCTGTCAGCCCCGGGATTGCAAATGAAAGATTAGGACAGAACCATATAGTCCTGAGGGCACATACACCCTCAAGAGATCCAGGCCAGCCCTTTGCTCTCAAACAGATAAGAGATTTAAATGTTCCAGGAACAACCATTGTTTATCAGTGGAACAAGTTGCCTGGAACAGGCAAGAGATGTAGATCAGATGTACATCTGGAAGGAGGGTCTCCTGACCTGGATGATAAACAAAAAGGAAAAGGAACATCTTACTCAGACTCATCTAAGTGA

Related Sequences

XP_004862409.1 Protein

Vgll1 PREDICTED: transcription cofactor vestigial-like protein 1 [Heterocephalus glaber]

Length: 311 aa      
>XP_004862409.1
MEEMKKTDTQLPTSRQKPIKTEWNSRSVLFTYFQGDISSEVDEHFSRALSNIKRPQELSPSSQSEEVILKNDSDMPPNHWRFSSPWTKPRPEASLATPATSSRLSVCDPMAMDHYPLALPETSSAQPRELWHFPSLATPSSPEPGYSQAFPSAHLAPGPHPGRKCEPFLSFLQQDRCLTCPPETAMREDYNPVQIAGSTGLLFNLPPSSVHCKKVYVSPSHGPVSPGIANERLGQNHIVLRAHTPSRDPGQPFALKQIRDLNVPGTTIVYQWNKLPGTGKRCRSDVHLEGGSPDLDDKQKGKGTSYSDSSK