Details from NCBI annotation

Gene Symbol Cd40lg
Gene Name CD40 ligand
Entrez Gene ID 101700616

Database interlinks

Part of NW_004624808.1 (Scaffold)

For more information consult the page for NW_004624808.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CD40LG ENSCPOG00000010506 (Guinea pig)

Gene Details

CD40 ligand

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009434, Guinea pig)

Protein Percentage 93.08%
CDS Percentage 92.56%
Ka/Ks Ratio 0.20294 (Ka = 0.0398, Ks = 0.1963)

CD40LG ENSG00000102245 (Human)

Gene Details

CD40 ligand

External Links

Gene Match (Ensembl Protein ID: ENSP00000359663, Human)

Protein Percentage 88.85%
CDS Percentage 90.77%
Ka/Ks Ratio 0.23913 (Ka = 0.0577, Ks = 0.2411)

Cd40lg ENSMUSG00000031132 (Mouse)

Gene Details

CD40 ligand

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000033466, Mouse)

Protein Percentage 78.08%
CDS Percentage 82.69%
Ka/Ks Ratio 0.24577 (Ka = 0.1242, Ks = 0.5053)

Cd40lg ENSRNOG00000000871 (Rat)

Gene Details

CD40 ligand (Cd40lg), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001162, Rat)

Protein Percentage 79.23%
CDS Percentage 82.69%
Ka/Ks Ratio 0.23308 (Ka = 0.121, Ks = 0.5189)

Genome Location

Sequence Coding sequence

Length: 783 bp    Location: 10484338..10472572   Strand: -
>XM_004862331.1
ATGATCGAAACATACAGTCAACCTTCTCCGCGATCTGTGGCCACTGGACAGCCCATCAGCATGAAAATTTTTATGTATTTACTTACTGTTTTTCTAATCACCCAGATGATTGGATCGGCATTTTTTGCTGTATATCTTCATAGAAGGTTAGACAAGATAGAAGATGAAAGGAATCTTCATGATGATTTTGTATTCATGAAAACAATACAGAGATGCAACAAAGGAGAAGAATCGTTATCCTTGCTGAACTGTGAGAAAATTAGAAGCCAGTTTGAAGGCTTTGTCAAGGATATAATGCTAAACAAAGAGGAAAAGAAAGAAATCAGCTATGAAAGGCAAAAAGGTGATCAAGATCCTCAAATTGCAGCACATGTCATAAGTCAAGCCAGTGGTAAAACAGCATCTGTTTTACAGTGGGCTGAAAAAGGATATTACACCATGAGCAGCAGCCTGGTAACCCTCGAAAATGGGAAACAGCTGACCATTAAAAGACAAGGACTCTATTACATCTACACCCAAGTCACCTTCTGTTCCAATCGAGAACCTCCGAGCCAAGCTCCATTTATAGCCAGCCTCTGTCTGAAGTCCACAAGTGGCTCTGAGAGAATCTTACTCCGAGCGGCAAATGTCCACAGTTCCTCCAAACCCTGCGGGCAGCAATCCATTCATTTGGGAGGAGTATTTGAATTGCAACCAGGTGCTTCGGTGTTTGTCAATGTGACTGATCCAAGCCAAGTGAGCCACGGGACTGGCTTCACATCTTTTGGCTTGCTCAAACTCTGA

Related Sequences

XP_004862388.1 Protein

Cd40lg PREDICTED: CD40 ligand [Heterocephalus glaber]

Length: 260 aa      View alignments
>XP_004862388.1
MIETYSQPSPRSVATGQPISMKIFMYLLTVFLITQMIGSAFFAVYLHRRLDKIEDERNLHDDFVFMKTIQRCNKGEESLSLLNCEKIRSQFEGFVKDIMLNKEEKKEISYERQKGDQDPQIAAHVISQASGKTASVLQWAEKGYYTMSSSLVTLENGKQLTIKRQGLYYIYTQVTFCSNREPPSQAPFIASLCLKSTSGSERILLRAANVHSSSKPCGQQSIHLGGVFELQPGASVFVNVTDPSQVSHGTGFTSFGLLKL