Sequence details NCBI ID: XM_004862310.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atp11c
Gene Name ATPase, class VI, type 11C, transcript variant X8
Entrez Gene ID 101721324

Database interlinks

Part of NW_004624808.1 (Scaffold)

For more information consult the page for NW_004624808.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATP11C ENSCPOG00000000872 (Guinea pig)

Gene Details

ATPase, class VI, type 11C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000785, Guinea pig)

Protein Percentage 97.12%
CDS Percentage 95.37%
Ka/Ks Ratio 0.0854 (Ka = 0.0137, Ks = 0.161)

ATP11C ENSG00000101974 (Human)

Gene Details

ATPase, class VI, type 11C

External Links

Gene Match (Ensembl Protein ID: ENSP00000332756, Human)

Protein Percentage 96.14%
CDS Percentage 93.35%
Ka/Ks Ratio 0.09344 (Ka = 0.022, Ks = 0.2354)

Atp11c ENSMUSG00000062949 (Mouse)

Gene Details

ATPase, class VI, type 11C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099066, Mouse)

Protein Percentage 93.23%
CDS Percentage 90.75%
Ka/Ks Ratio 0.101 (Ka = 0.0347, Ks = 0.3441)

Atp11c ENSRNOG00000003472 (Rat)

Gene Details

Protein Atp11c

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048676, Rat)

Protein Percentage 93.7%
CDS Percentage 90.59%
Ka/Ks Ratio 0.08995 (Ka = 0.0327, Ks = 0.3631)

Genome Location

Sequence Coding sequence

Length: 3192 bp    Location: 6778794..6952678   Strand: +
Raw sequence   
>XM_004862310.1
ATGTTCCGCCGGAGCTTGAATCGCTTTTGTGCTGGAGAGGAGAAACGAGTCGGTACACGCACAGTGTTTGTTGGCAATCATCCAATTTCAGAAACAGAAACTTATATTGCACAGAGATTTTGTGATAACAGAATAGTCTCATCTAAGTATACACTTTGGAATTTCCTCCCAAAGAATTTATTTGAACAGTTTAGAAGAATTGCAAATTTTTATTTTCTCATCATTTTCCTTGTACAGGTCACAGTAGACACACCAACTAGCCCAGTTACTAGTGGACTTCCACTTTTCTTTGTTATAACCGTTACAGCCATTAAACAGGGATATGAAGATTGGCTCAGACACAGAGCTGACAATGAAGTCAACAAGAGCACTGTTTACATTATTGAAAATGCAAAACGAGTGAGAAAAGAAAGTGAAAAAATCAAGGTTGGTGATGTAGTAGAAGTACAGGCAGATGAAACCTTTCCCTGTGATCTTATTCTTCTATCATCCTGCACCACTGATGGAACCTGTTATGTCACTACAGCCAGTCTCGATGGAGAATCCAATTGCAAGACACATTATGCAGTACGGGACACTATTGCACTCTGTACAGCTGAATCCATCGATAGGCTCCGAGCAGCAATTGAATGTGAACAGCCTCAACCTGACCTCTACAAATTTGTTGGGCGAATCAATATCTATAGTAATAGTCTTGAAGCTGTTGCCAGGTCTTTGGGACCTGAAAATCTCTTGCTGAAAGGAGCTACACTAAAAAATACCAAGAAGATATATGGAGTTGCTGTTTACACTGGGATGGAAACCAAAATGGCTTTGAACTACCAAGGAAAATCGCAGAAACGTTCTGCTGTCGAAAAATCCATTAATGCCTTCTTGATTGTATATTTATTTATCTTACTGACCAAAGCAGCAGTATGCACTACTCTAAAGTATATTTGGCAGAGTACCCCTCACAATGACGAACCTTGGTATAATCGAAAGACTCAGAAAGAACGGGAGACTTTTAAGGTGGATTATGTATTTACAGATAAGACTGGAACACTCACTGAAAATAGCATGGAATTCATTGAATGCTCCATAGATGGGCACAAATATAAAGATGAAACTCAGGAAGTTGATGGATTGTCACAGACTGATGGACCTTTAACATATTTTGACAAAGCAGATAAGGATCGAGAGGAGCTCTTTCTGCGTGCCTTGTGTTTATGTCATACTGTAGAAACTAAAACAAACGATGCTGTTGATGGAGCTACAGAGTCAGCTGAACTAACCTATGTCTCCTCCTCACCAGATGAAATAGCTTTGGTAAAAGGAGCGAAGAAGTATGGGTTCACATTTTTAGGAAATCAGAATGGACTTATGAGAGTAGAGAACCAAAGGAAAGAAGTTGAAGAGTACGAACTTCTTCACACTTTAAACTTTGATGCTGTTCGCCGACGAATGAGTGTAATTGTGAAGACTCAAGGAGGAGACATACTCCTCTTTTGTAAAGGAGCAGATTCAGCAGTTTTTCCCAGGGTGCAAAACCATGAAATTGAGTTAACAAAGGCCCATGTGGAACGTAATGCAATGGATGGGTATCGGACACTGTGTGTAGCTTTCAAAGAAATTGCTCCAGATGATTATGAAAGAATTAACAGACAACTCATAGAGGCAAAAATGGCCTTACAAGACAGAGAAGAAAAAATGGAAAAGGTTTTTGATGATATTGAGACCAACATGAATTTAATTGGAGCCACTGCAGTGGAAGACAAGCTACAAGATCAAGCTGCAGAGACCATTGAAGCTCTGCATACAGCCGGCCTAAAAGTCTGGGTGCTTACTGGGGACAAGATGGAGACAGCAAAATCTACTTGCTATGCCTGCCGCCTTTTCCAAACCAGCACTGAACTCTTGGAACTCACCACAAAAACCATTGAAGAAAGTGAAAGGAAAGAAGATCGACTACATGAATTGTTGATAGAATATCGTAAGAAGTTGCTTCACGAATTTCCTAAAAGTGCTAGAAGCCTTAAAAAAGCATGGACAGAACATCAGGAATATGGATTAATCATTGATGGTTCTACATTGTCACTCATACTAAATTCTAGTCAAGACTCTAGTTCAAACAATTACAAAACCATTTTCCTACAGATCTGTATGAAGTGTACCGCAGTGCTCTGCTGCCGGATGGCACCACTACAGAAAGCCCAGATTGTCAGAATGGTGAAGAATTTAAAAGGCAGCCCAATAACACTGTCGATAGGTGATGGTGCCAACGATGTTAGTATGATCTTGGAATCCCATGTGGGAATAGGTATTAAAGGCAAAGAAGGTCGCCAAGCAGCCAGAAATAGTGATTATTCTGTTCCAAAGTTTAAACATTTAAAGAAACTACTGTTGGCTCATGGACATCTATACTATGTGAGAATAGCACATCTTGTACAGTATTTCTTCTATAAGAACCTTTGTTTCATTTTGCCACAGTTTTTGTACCAGTTCTTCTGTGGATTCTCGCAACAGCCACTGTATGATGCTGCTTATCTTACAATGTATAATATCTGCTTCACATCCCTGCCCATCTTGGCCTACAGTCTGCTGGAACAGCACATTCACATTGACACACTGACCTCAGACCCTCGATTATATATGAAAATTTCTGGCAATGCCATGCTACAGTTGGGCCCCTTCTTATATTGGACATTTCTGGCTGCCTTTGAAGGGACAGTGTTCTTCTTTGGGACTTACTTTCTTTTTCATACTGCATCTCTAGAAGAAAATGGAAAGGTCTATGGAAACTGGACTTTTGGAACCATTGTTTTCACGGTCCTAGTATTCACTGTAACTCTGAAGCTCGCCTTGGATACTCGGTTCTGGACATGGATAAATCACTTTGTGATTTGGGGTTCTTTAGCCTTTTATATATTTTTCTCATTCTTCTGGGGAGGAATTATTTGGCCTTTTCTTAAACAACAGAGAATGTATTTCGTATTTGCTCAAATGCTGTCTTCTGTATCCACATGGTTGGCCATAATTCTTCTAATATTTGTTAGCCTTTTCCCTGAGATTCTCCTGATAGTATTAAAGAATGTAAGAAGAAGAAGTGCCAGGAGAAATCTGAACTGTAGAAGGGCATCTGACTCATTATCCACCAGACCTTCAGTCAGACCTCTTCTTTTACGAACATTCTCAGATGAATCTAATGTATTGTAA

Related Sequences

XP_004862367.1 Protein

Atp11c PREDICTED: probable phospholipid-transporting ATPase IG isoform X8 [Heterocephalus glaber]

Length: 1063 aa      View alignments
>XP_004862367.1
MFRRSLNRFCAGEEKRVGTRTVFVGNHPISETETYIAQRFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVTVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSTVYIIENAKRVRKESEKIKVGDVVEVQADETFPCDLILLSSCTTDGTCYVTTASLDGESNCKTHYAVRDTIALCTAESIDRLRAAIECEQPQPDLYKFVGRINIYSNSLEAVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLFILLTKAAVCTTLKYIWQSTPHNDEPWYNRKTQKERETFKVDYVFTDKTGTLTENSMEFIECSIDGHKYKDETQEVDGLSQTDGPLTYFDKADKDREELFLRALCLCHTVETKTNDAVDGATESAELTYVSSSPDEIALVKGAKKYGFTFLGNQNGLMRVENQRKEVEEYELLHTLNFDAVRRRMSVIVKTQGGDILLFCKGADSAVFPRVQNHEIELTKAHVERNAMDGYRTLCVAFKEIAPDDYERINRQLIEAKMALQDREEKMEKVFDDIETNMNLIGATAVEDKLQDQAAETIEALHTAGLKVWVLTGDKMETAKSTCYACRLFQTSTELLELTTKTIEESERKEDRLHELLIEYRKKLLHEFPKSARSLKKAWTEHQEYGLIIDGSTLSLILNSSQDSSSNNYKTIFLQICMKCTAVLCCRMAPLQKAQIVRMVKNLKGSPITLSIGDGANDVSMILESHVGIGIKGKEGRQAARNSDYSVPKFKHLKKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHIHIDTLTSDPRLYMKISGNAMLQLGPFLYWTFLAAFEGTVFFFGTYFLFHTASLEENGKVYGNWTFGTIVFTVLVFTVTLKLALDTRFWTWINHFVIWGSLAFYIFFSFFWGGIIWPFLKQQRMYFVFAQMLSSVSTWLAIILLIFVSLFPEILLIVLKNVRRRSARRNLNCRRASDSLSTRPSVRPLLLRTFSDESNVL