Sequence details NCBI ID: XM_004862299.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slitrk4
Gene Name SLIT and NTRK-like family, member 4
Entrez Gene ID 101718763

Database interlinks

Part of NW_004624808.1 (Scaffold)

For more information consult the page for NW_004624808.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLITRK4 ENSCPOG00000014391 (Guinea pig)

Gene Details

SLIT and NTRK-like family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018457, Guinea pig)

Protein Percentage 95.95%
CDS Percentage 93.09%
Ka/Ks Ratio 0.09054 (Ka = 0.021, Ks = 0.2319)

SLITRK4 ENSG00000179542 (Human)

Gene Details

SLIT and NTRK-like family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000371198, Human)

Protein Percentage 95.94%
CDS Percentage 91.96%
Ka/Ks Ratio 0.06152 (Ka = 0.0191, Ks = 0.3112)

Slitrk4 ENSMUSG00000046699 (Mouse)

Gene Details

SLIT and NTRK-like family, member 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000064443, Mouse)

Protein Percentage 95.7%
CDS Percentage 89.49%
Ka/Ks Ratio 0.04928 (Ka = 0.0218, Ks = 0.4426)

Slitrk6 ENSRNOG00000022337 (Rat)

Gene Details

SLIT and NTRK-like family, member 6 (Slitrk6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034471, Rat)

Protein Percentage 42.0%
CDS Percentage 50.78%
Ka/Ks Ratio 0.07761 (Ka = 0.5645, Ks = 7.2732)

Genome Location

Sequence Coding sequence

Length: 2514 bp    Location: 3516090..3523455   Strand: +
Raw sequence   
>XM_004862299.1
ATGTTTCTTTGGCTCTTTCTGATTTTGTCAGCCCTGATTTCTTCGACAAATGCAGATTCTGACATCTCAGTGGAAATTTGCAATGTGTGCTCCTGCGTGTCAGTGGAGAATGTACTCTATGTCAACTGTGAGAAAGTTTCAGTGTACAGGCCAAATCAGCTGAAACCACCTTGGTCTAATTTTTATCACCTTAATTTTCAAAACAATTTTTTAAATATCCTCTATCCAAATACATTCTTGAATTTTTCTCACGCAGTATCCCTGCATCTGGGAAATAATAAACTGCAGAACATTGAGGGAGGAGCCTTTCTGGGGCTCAGTGCATTAAAGCAGTTGCACTTGAACAACAATGAATTGAAGGTTCTCCGAGCTGACACTTTCCTTGGCATAGAGAACTTGGAGTATCTCCAGGCTGACTACAATTTAATCAAGTATATTGAACGAGGAGCCTTCAATAAGCTCCACAAACTGAAAGTGCTCATTCTGAATGACAATCTGATTTCCTTCCTTCCTGATAATATTTTCCGATTCGCATCTTTGACCCATCTGGACATACGAGGGAACAGAATCCACAAGCTCCCCTACATGGGAGTTCTGGAACACATTGGCCGTGTGGTCGAATTGCAACTGGAAGATAACCCTTGGAACTGTAGCTGTGACCTGTTGCCTTTAAAAGCTTGGCTGGAGAACATGCCATATAACATTTACATAGGCGAAGCTATCTGTGAAACTCCCAGTGACTTATATGGAAGGCTTTTAAAAGAAACCAACAAACAAGAATTGTGCCCCATGGGCACAGGTAGTGATTTTGATGTCAAAATCTTGCCTCCGTCTCAGCTGGAAAACAGCCACACCACTCCCAATGGCCACACTACTCAAACATCCTTGCACAGATTAGTGACCAAACCGCCCAAAACAACAAATCCTTCCAAGATCTCTGGAATCGTGGCTGGCAAAGCCCTCTCCAACCGCAGTCTCAGTCAGATTGTGTCTTACCAAACAAGGGTGCCTCCTCTTACACCCTGTCCAGCGCCTTGCTTCTGCAAAACGCACCCTTCAGATTTGGGACTGAACGTGAACTGCCAAGAGAAAAACATACAGTCCATGGCTGAGCTGGTACCGAAACCTTTAAATGCCAAGAAATTGCACGTCAATGGCAATAGCATCAAAGACCTGGACATCTCAGACTTCGCCGAGTTTGAAGGACTAGATTTGCTCCATTTAGGCAGCAATCAGATTACAGTGGTCAAGGGGGGCGTATTCCACAATCTGACTAATTTGCGCAGGCTGTATCTCAATGGCAATCAGATCGAAAGACTCTATCCTGAAATCTTTTCAGGCCTTCATAACCTGCAGTATCTTTATTTGGAGTACAATTTGATTAGGGAGATCTTAGCAGGCACCTTTGACTGCATGCCCAATTTGCAGTTATTGTACTTAAACAATAATCTCCTGAAAAGCCTGCCTGTTTATATTTTTTCCGGAGTACCCCTTGCCAGACTGAACCTGAGGAACAACAAATTCATGTACCTGCCTGTCAGTGGGGTCCTCGATCAGCTGCAGTCTCTTACCCAGATTGACTTGGAGGGCAACCCGTGGGACTGCACTTGTGACTTGGTGGCCCTGAAGCTGTGGCTGGAGAAGTTAAATGACGGCATTATCGTGAAAGAACTGAAGTGCGAGACACCTGTTCAGTTTGCCAACATGGAACTGAGGTCCCTGAAAAATGAAATCTTGTGCCCCAAACTTTTAAACAAGCCATCTGCACCCTTCACAAGCCCTGCACCTGCCATTACATTCACCACCCCGTTGGGGCCCATTCGAAGTCCTCCCGGTGGCCCAGTGCCTCTGTCTATTTTAATCCTAAGTATCTTAGTGGTCCTCATTCTAACTGTCTTTGTTGCTTTTTGCCTTCTTGTTTTTGTGCTGAGACGCAACAAGAAACCCACGGTAAAGAACGAAGGCCTGGGGAATCCCGAGTGTGGCTCCATGCAGCTGCAGCTACGGAAGCATGACCACAAAACCAATAAAAAAGACGGACTGAGCACCGAAGCTTTCATTCCCCAAACCATTGAACAGATGAGCAAGAGTCACACCTGTGGCTTGAAAGAGTCAGACACCGGGTTCATGTTTTCGGATCCCCCGGGACAGAAAGTCGTTGTGAGAAATGTGGCTGACAAGGACAAAGATTCATTGCACGTGGATACCAGGAAGAGACTGAGCACAATTGATGAGATAGATGAATTATTCCCTAGCAGGGATTCCAATGTGTTTATTCAGAATTTTCTTGAAAGCAAAAAAGAATATAATAGCATAGGTGTCAGTGGCTTTGAGATCCGCTATCCAGAAAAACAACAAGATAAAAAAAACAAGAAGTCACTGATAGGTGGAAACCACAGTAAAATTGTTGTGGAGCAAAGGAAGAGCGAGTATTTCGAACTGAAGGCGAAACTTCAGAGTTCTCCTGACTACCTACAAGTCCTTGAGGAGCAAACAGCTTTGAACAAGATATAG

Related Sequences

XP_004862356.1 Protein

Slitrk4 PREDICTED: SLIT and NTRK-like protein 4 [Heterocephalus glaber]

Length: 837 aa      View alignments
>XP_004862356.1
MFLWLFLILSALISSTNADSDISVEICNVCSCVSVENVLYVNCEKVSVYRPNQLKPPWSNFYHLNFQNNFLNILYPNTFLNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNNELKVLRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIFRFASLTHLDIRGNRIHKLPYMGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIYIGEAICETPSDLYGRLLKETNKQELCPMGTGSDFDVKILPPSQLENSHTTPNGHTTQTSLHRLVTKPPKTTNPSKISGIVAGKALSNRSLSQIVSYQTRVPPLTPCPAPCFCKTHPSDLGLNVNCQEKNIQSMAELVPKPLNAKKLHVNGNSIKDLDISDFAEFEGLDLLHLGSNQITVVKGGVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNLQYLYLEYNLIREILAGTFDCMPNLQLLYLNNNLLKSLPVYIFSGVPLARLNLRNNKFMYLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIIVKELKCETPVQFANMELRSLKNEILCPKLLNKPSAPFTSPAPAITFTTPLGPIRSPPGGPVPLSILILSILVVLILTVFVAFCLLVFVLRRNKKPTVKNEGLGNPECGSMQLQLRKHDHKTNKKDGLSTEAFIPQTIEQMSKSHTCGLKESDTGFMFSDPPGQKVVVRNVADKDKDSLHVDTRKRLSTIDEIDELFPSRDSNVFIQNFLESKKEYNSIGVSGFEIRYPEKQQDKKNKKSLIGGNHSKIVVEQRKSEYFELKAKLQSSPDYLQVLEEQTALNKI