Details from NCBI annotation

Gene Symbol Pkp1
Gene Name plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
Entrez Gene ID 101724616

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PKP1 ENSCPOG00000008647 (Guinea pig)

Gene Details

plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007768, Guinea pig)

Protein Percentage 96.14%
CDS Percentage 93.71%
Ka/Ks Ratio 0.04853 (Ka = 0.0163, Ks = 0.3369)

PKP1 ENSG00000081277 (Human)

Gene Details

plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)

External Links

Gene Match (Ensembl Protein ID: ENSP00000263946, Human)

Protein Percentage 94.62%
CDS Percentage 91.26%
Ka/Ks Ratio 0.04438 (Ka = 0.0245, Ks = 0.5515)

Pkp1 ENSMUSG00000026413 (Mouse)

Gene Details

plakophilin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027667, Mouse)

Protein Percentage 93.53%
CDS Percentage 89.16%
Ka/Ks Ratio 0.04446 (Ka = 0.0309, Ks = 0.6942)

Pkp1 ENSRNOG00000010076 (Rat)

Gene Details

plakophilin 1 (Pkp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013532, Rat)

Protein Percentage 92.38%
CDS Percentage 87.86%
Ka/Ks Ratio 0.04477 (Ka = 0.0376, Ks = 0.8398)

Genome Location

Sequence Coding sequence

Length: 2181 bp    Location: 9419067..9376408   Strand: -
>XM_004862253.1
ATGAACCACTCGCCGCTCAAGACCGCCCTGGCGTACGAATGCTTCCAGGACCAGGACAACTCCACGCTGGCCTTGCCGTCCGACCAAAGGATGAAGACAGGCACGTCGGGCAGGCAGCGCGTGCAGGAGCAGGTGATGATGACGGTCAGGAGGCAGAAGTCCAAGTCCTCCCAGTCGTCCACGCTGAGCCACTCCAACCGAGGTTCCATGTATGATGGCTTATTGGACAATTATAACAACTATGGGACCACCAGCCGGAGCAGCTACTATTCCAAGTTCCAGGCAGGAAATGGCTCATGGGGATATCCGATGTTCAATGGGACCCTCAAGCGGGAGCCAGACAACAGGCGCTTCAGCTCCTACAGCCAGATGGAGAACTGGAGTCGCCACTATCCTCGGGGCAGCTGTGCCACCCCTGGCGCAGGCAGCGACATCTGCTTCATGCAGAAAATCAAGGCAAGCCGCAGTGAGCCCGACCTCTACTGTGACCCGAAGGGCACCCTGCGCAAGGGCACGCTGACCAAGGGCCACAAGACCACCCAGAACCACTATAGCTTCTACAGCACCTGTAGTGGCCAGAAAGCCACCAAGAAGTGCCCTGTACGCCCACCCTCCTGTACCTCCAAGCAGGACCAAGTGTATGTGCCGCCCATCTCCTGCAACAAAGACTTGTCCTTTGGCCACTCAAGAGCCAGCTCCAAGATCTGTAGCGAGGACATCGAGTGCAGTGGACTGACTATCCCCAAGGCTGTGCAGTACCTGAGCTCCCAGGATGAGAAGTACCAGGCTATCGGGGCCTATTACATCCAGCACACCTGCTTCCAGGATGAATCCGCCAAGCAACAGGTTTACCAGTTGGGAGGCATCTGCAAGCTAGTGGACCTCCTCCGCAGCCCCAACCAGAACGTCCAGCAGGCTGCAGCGGGGGCCCTGCGCAACCTGGTGTTCCGGAGCAACCCCAACAAGCTGGAGACCCGGAGGCAGAATGGGATCCGAGAGGCCGTCAACCTCTTGCGGAGAACGGGAAGCACGGAGATCCAGAAACAACTGACAGGGCTGCTCTGGAACCTTTCTTCCACTGATGAGCTAAAGGAGGAGCTGGTGGCCGATGCCCTTCCTGTTCTGGCTGACCGGGTCATCATTCCCTTCTCGGGCTGGTGTGATGGCAACAGCAACATGTCCAGGGACACAGTGGACCCTGAGGTCTTCTTCAACGCCACAGGCTGCTTGAGGAATCTGAGCTCTGCCGATGCCGGCCGCCAGACCATGCGGAATTACACAGGGCTCATCGACTCCCTCATGGCCTATGTCCAGAACTGTGTGGCAGCCAGCCGCTGCGATGACAAGTCTGTGGAGAACTGCATGTGCATCCTGCACAACCTCTCCTACCGCCTGGATGCTGAGGTGCCCACCCGCTACCGCCAGCTGGAGTACAATGCCCGCAATGCCTACATGGAGAAGTCCTCCACCGGCTGCTTCAGCAACAAGAGCAATAAGATGATGAACAACAGCTATGAGTGTCCCCTTCCCGAGGAAGAGACCAACCCCAGGGGCAGCGGCTGGCTGTACCACTCAGATGCCATCCGCACCTACCTGAACCTCATGGGCAAGAGCAAGAAGGACGCCACCCTGGAGGCCTGCGCTGGCGCCCTGCAGAACCTGACGGCCAGCAAGGGGCTGATGTCCAGCGGCATGAGCCAGTTGATTGGACTGAAAGAAAAGGGCTTACCACAAATTGCCCGCCTCCTGCAATCTGGCAACTCGGACGTGGTGCGGTCCGGGGCCTCCCTCCTGAGCAACATGTCCCGCCATCCTGTGCTGCACAGAGTGATGGGGAACCAAGTATTCCCAGAGGTGACTAGGCTCCTCACCAGCCACACTGGCAACACCAACAACTCGGAAGACATCTTGTCTTCGGCCTGCTACACTGTGAGGAACCTGATGGCCTCGCAGCCGCAGATGGCCAAGCAGTACTTCTCCAGCAGCATGCTCAACAACGTCAACAACCTGTGCCGCAGCAGCACCTCACCCAAGGCTGCAGAGGCTGCTCGGCTCCTCCTGTCTGACATGTGGTCCATCAGGGAGCTGCAGGGTGTCCTCAGACAGCAAGGTTTCGATAGGAGCATGCTGGGAACCCTAGCCGGGGCCAACAGCCTCAGGAATTTTACCTCCCGATTCTAA

Related Sequences

XP_004862310.1 Protein

Pkp1 PREDICTED: plakophilin-1 [Heterocephalus glaber]

Length: 726 aa      View alignments
>XP_004862310.1
MNHSPLKTALAYECFQDQDNSTLALPSDQRMKTGTSGRQRVQEQVMMTVRRQKSKSSQSSTLSHSNRGSMYDGLLDNYNNYGTTSRSSYYSKFQAGNGSWGYPMFNGTLKREPDNRRFSSYSQMENWSRHYPRGSCATPGAGSDICFMQKIKASRSEPDLYCDPKGTLRKGTLTKGHKTTQNHYSFYSTCSGQKATKKCPVRPPSCTSKQDQVYVPPISCNKDLSFGHSRASSKICSEDIECSGLTIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSNPNKLETRRQNGIREAVNLLRRTGSTEIQKQLTGLLWNLSSTDELKEELVADALPVLADRVIIPFSGWCDGNSNMSRDTVDPEVFFNATGCLRNLSSADAGRQTMRNYTGLIDSLMAYVQNCVAASRCDDKSVENCMCILHNLSYRLDAEVPTRYRQLEYNARNAYMEKSSTGCFSNKSNKMMNNSYECPLPEEETNPRGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPVLHRVMGNQVFPEVTRLLTSHTGNTNNSEDILSSACYTVRNLMASQPQMAKQYFSSSMLNNVNNLCRSSTSPKAAEAARLLLSDMWSIRELQGVLRQQGFDRSMLGTLAGANSLRNFTSRF