Details from NCBI annotation

Gene Symbol Chi3l1
Gene Name chitinase 3-like 1 (cartilage glycoprotein-39), transcript variant X2
Entrez Gene ID 101703445

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHI3L1 ENSCPOG00000005221 (Guinea pig)

Gene Details

chitinase 3-like 1 (cartilage glycoprotein-39)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004694, Guinea pig)

Protein Percentage 85.9%
CDS Percentage 89.82%
Ka/Ks Ratio 0.26748 (Ka = 0.0707, Ks = 0.2643)

CHI3L1 ENSG00000133048 (Human)

Gene Details

chitinase 3-like 1 (cartilage glycoprotein-39)

External Links

Gene Match (Ensembl Protein ID: ENSP00000255409, Human)

Protein Percentage 80.16%
CDS Percentage 83.72%
Ka/Ks Ratio 0.21478 (Ka = 0.1119, Ks = 0.5212)

Chi3l1 ENSMUSG00000064246 (Mouse)

Gene Details

chitinase 3-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080717, Mouse)

Protein Percentage 69.21%
CDS Percentage 77.37%
Ka/Ks Ratio 0.27209 (Ka = 0.1911, Ks = 0.7025)

Chi3l1 ENSRNOG00000003312 (Rat)

Gene Details

chitinase 3-like 1 (cartilage glycoprotein-39) (Chi3l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065787, Rat)

Protein Percentage 70.68%
CDS Percentage 78.01%
Ka/Ks Ratio 0.23094 (Ka = 0.1698, Ks = 0.7353)

Genome Location

Sequence Coding sequence

Length: 1152 bp    Location: 7655791..7662362   Strand: +
>XM_004862192.1
ATGGGGGCAAGGGGGACTCTGACAGGCTTCGCAGTTCTGGTGTTGCTCCAGTGCTGTTTTGCATACAAACTGGTTTGCTACTACACCAACTGGTCCCAGTACCGGGAAGGTGATGGGAGCTGCTTCCCCGATGCCATCGACCCCTTCCTCTGTACCCACATCATCTACAGCTTTGCCAACATAAGTGACAATGAGATCGACACTCTGGAGTGGAATGATGTGACCCTCTATGGCCAGCTGAACTCACTTAAAAAGAGGAACCCCAGCCTGAAGACCTTCCTGTCTGTTGGGGGATGGAACTTTGGCTCTCAAAGATTTTCCAGCATAGCCTCCAGCACCCAGAGACGCAAGACTTTCATCAAGTCAGTGCCAAAGTTTCTGCGGGCCCATGGCTTTGATGGGCTGGACCTAGCCTGGATGTACCCCCAACGGAGAGACAAGGAGCATTTTACCACCCTGATCAAGGAAATGAAGGCTGAATTTTTAAAGGAGACGCAGGCCGGAAAGGAGCAGCTCCTGCTCAGCGCAGCATTGTCTGCAGGGAAGGTCACCATAGACGCCAGCTATGACATTGCCCAGATATCCCGACACCTGGATTTCATCAGCATTCTGACCTACGATTTCCATGGAGCCTGGCGCCAAACCACAGGACATCACAGCGCCCTCTTCCGAGGCGAGCTGGATGGCAAGGCGGACAGATTCAACAACGTGGACCATGCCGTAGGGTACATGTTGCTGCAGGGTGCCCCAGCCAGCAAGCTGTTGATGGGCATCCCGACCTTCGGGAAGACCTATACCTTGGCCTCTTCTGAGAACGGTGTCGGAGCCCCGATCTCGGGGCCAGGACTAGCAGGCCAGTTCACCAAGGAGGAAGGGACCCTCGCCTACTATGAGATCTGTAACTTCCTCCATGGAGCGACAGTCCAGAGAATCGCCAGCCAGAAGGTTCCCTACGCTACCAAGGGCAACCAGTGGGTGGGGTACGATGACCAGGAAAGTGTCAGAAGCAAGGCACAGTACCTGAAAAGCAGGCAGCTGGCAGGTGCCATAGTGTGGACCCTGGATTTGGATGACGTCCAGGGCACCTTCTGTGGCCAGAATCTACCCTTCCCCCTTACCAGTGCCATCAAGGATGTTCTCACTGCGGCTTAG

Related Sequences

XP_004862249.1 Protein

Chi3l1 PREDICTED: chitinase-3-like protein 1 isoform X2 [Heterocephalus glaber]

Length: 383 aa      View alignments
>XP_004862249.1
MGARGTLTGFAVLVLLQCCFAYKLVCYYTNWSQYREGDGSCFPDAIDPFLCTHIIYSFANISDNEIDTLEWNDVTLYGQLNSLKKRNPSLKTFLSVGGWNFGSQRFSSIASSTQRRKTFIKSVPKFLRAHGFDGLDLAWMYPQRRDKEHFTTLIKEMKAEFLKETQAGKEQLLLSAALSAGKVTIDASYDIAQISRHLDFISILTYDFHGAWRQTTGHHSALFRGELDGKADRFNNVDHAVGYMLLQGAPASKLLMGIPTFGKTYTLASSENGVGAPISGPGLAGQFTKEEGTLAYYEICNFLHGATVQRIASQKVPYATKGNQWVGYDDQESVRSKAQYLKSRQLAGAIVWTLDLDDVQGTFCGQNLPFPLTSAIKDVLTAA