Details from NCBI annotation

Gene Symbol Chit1
Gene Name chitinase 1 (chitotriosidase), transcript variant X3
Entrez Gene ID 101702614

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHIT1 ENSCPOG00000021800 (Guinea pig)

Gene Details

chitinase 1 (chitotriosidase)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015540, Guinea pig)

Protein Percentage 78.57%
CDS Percentage 81.14%
Ka/Ks Ratio 0.27155 (Ka = 0.15, Ks = 0.5524)

CHIT1 ENSG00000133063 (Human)

Gene Details

chitinase 1 (chitotriosidase)

External Links

Gene Match (Ensembl Protein ID: ENSP00000356198, Human)

Protein Percentage 79.0%
CDS Percentage 82.74%
Ka/Ks Ratio 0.22238 (Ka = 0.1232, Ks = 0.5538)

Chit1 ENSMUSG00000026450 (Mouse)

Gene Details

chitinase 1 (chitotriosidase)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000123979, Mouse)

Protein Percentage 74.22%
CDS Percentage 78.28%
Ka/Ks Ratio 0.20519 (Ka = 0.1574, Ks = 0.7671)

Chit1 ENSRNOG00000028072 (Rat)

Gene Details

chitinase 1 (chitotriosidase) (Chit1), transcript variant bChiV_3, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036477, Rat)

Protein Percentage 74.7%
CDS Percentage 79.08%
Ka/Ks Ratio 0.23862 (Ka = 0.1586, Ks = 0.6644)

Genome Location

Sequence Coding sequence

Length: 1260 bp    Location: 7612293..7625535   Strand: +
>XM_004862190.1
ATGGCACCGTCTGTGGCCTGGGCAGGTGTGATGTTCCTGCTGGTGGTCCAGTGGGGTTCTGCAGCAAAATTGGTCTGCTACTTCACTAACTGGGCCCAGTACCGAGAGGGGGCGGCTCGCTTCTTGCCTGGGACCGTGGACCCCAACCTGTGCACACATCTCATCTACGCCTTCGCAGGCATGAGTGGCCACCAGCTCAGCTCCCTGGAGTGGAATGACAAGCAGCTCTACCAGGACTTCAATGGCCTGAAGAAGATGAACCCCAAGCTCAGGACCCTGCTAGCCCTGGGTGGCTGGAGCTTCGGCACTCAGAAGTTCACAGATATGGTGGCCACAGCCAACAACCGGCAGGTCTTTGTCAACTCCGCCGTCAAGTTCCTGCGAACATACGGCTTTGATGGCCTTGACCTAGACTGGGAGTACCCAGGAAGCCGGGGGAGCCCGGCCTTCTGGCAGGAAGCCCGGGCCTCAGGGAGGGAAAGGCTCCTGCTGAGTGCGGCTGTCCCCGCCGGACGACACTTTGTGGATGCTGGCTACGAGGTGGACAAACTTGCTCCGGACTTGGACTTCATCAACCTCATGGCCTACGACTTCCATGGCTCCTGGGACAAGGTCACGGGACATCACAGTCCCCTGTACAAGCGGCAGGGGGAGAGTGGCACCGTGGCTGAATACAATGTGGATGCTGCTGTACAGTTGTGGCTGCAGAAGGGAGCCCCCGCCAGCAAGCTGATCCTTGGCATGCCCACCTACGGACGGTCCTTCACCCTGGCCTCCTCCTTAGACACCAGAGTGGGGGACCCAGCCACAGGGCCTGGTGCCCCCGGCCCCTTCACTAAAGGAGAAGGACTCCTGGCTTACTATGAGGTCTGCTCCTGGAAGGGGCAGCGCAGAATTGAGGACCAGAAGGTGCCCTATGCCTTCCGGGATAACCAGTGGGTGGGATTTGATGATGTGGAGAGCTTCAAAGCCAAGGGCCGGTACCCGCTCATCCGGACGCTGCAGCGGGAGCTGAGTGTTCCATCCGTGTCTCCAGGCCCCCCAGAGCCTGAAGTGCCTGCACCTGGCCAGCCCTCTGACCCCGAGCCAGACCCCAGCCCTGGACAAGACAGCTTCTGCCAGGGCAAAGCCGATGGGCTCTACCCCAGCCCTCAGGAAGTGTCCAGATATTATACCTGCGCAGGGGGCCGGCTGTTTCAGCAGAGCTGTGCCCCAGGCCTGGTGTTCAGTGCCTTGTGCAAGTGCTGCACCTGGAGATGA

Related Sequences

XP_004862247.1 Protein

Chit1 PREDICTED: chitotriosidase-1 isoform X3 [Heterocephalus glaber]

Length: 419 aa      View alignments
>XP_004862247.1
MAPSVAWAGVMFLLVVQWGSAAKLVCYFTNWAQYREGAARFLPGTVDPNLCTHLIYAFAGMSGHQLSSLEWNDKQLYQDFNGLKKMNPKLRTLLALGGWSFGTQKFTDMVATANNRQVFVNSAVKFLRTYGFDGLDLDWEYPGSRGSPAFWQEARASGRERLLLSAAVPAGRHFVDAGYEVDKLAPDLDFINLMAYDFHGSWDKVTGHHSPLYKRQGESGTVAEYNVDAAVQLWLQKGAPASKLILGMPTYGRSFTLASSLDTRVGDPATGPGAPGPFTKGEGLLAYYEVCSWKGQRRIEDQKVPYAFRDNQWVGFDDVESFKAKGRYPLIRTLQRELSVPSVSPGPPEPEVPAPGQPSDPEPDPSPGQDSFCQGKADGLYPSPQEVSRYYTCAGGRLFQQSCAPGLVFSALCKCCTWR