Details from NCBI annotation

Gene Symbol Sox13
Gene Name SRY (sex determining region Y)-box 13, transcript variant X4
Entrez Gene ID 101726231

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SOX13 ENSCPOG00000006604 (Guinea pig)

Gene Details

SRY (sex determining region Y)-box 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005947, Guinea pig)

Protein Percentage 93.66%
CDS Percentage 91.82%
Ka/Ks Ratio 0.07084 (Ka = 0.0289, Ks = 0.4082)

SOX13 ENSG00000143842 (Human)

Gene Details

SRY (sex determining region Y)-box 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000356172, Human)

Protein Percentage 91.54%
CDS Percentage 90.41%
Ka/Ks Ratio 0.07968 (Ka = 0.0388, Ks = 0.4863)

Sox13 ENSMUSG00000070643 (Mouse)

Gene Details

SRY-box containing gene 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000092130, Mouse)

Protein Percentage 86.95%
CDS Percentage 86.24%
Ka/Ks Ratio 0.08643 (Ka = 0.0631, Ks = 0.7304)

Sox13 ENSRNOG00000028353 (Rat)

Gene Details

SRY (sex determining region Y)-box 13 (Sox13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030216, Rat)

Protein Percentage 85.78%
CDS Percentage 86.27%
Ka/Ks Ratio 0.09942 (Ka = 0.0677, Ks = 0.6815)

Genome Location

Sequence Coding sequence

Length: 1848 bp    Location: 6858319..6848218   Strand: -
>XM_004862168.1
ATGTCCATGAGGAGCCCCGTCTCTGCCCGGCTGGCTCTGGATGGCGCTGGCACCATGGTGAACTGCACCATCAAGGCTGAGGAGAAGAAGGATCCTTGCCGTGAGGACTCCCAGGGTTCAGCCGCTGTGGCTGAGCCCCAGCCTGGAGACCCAGTCCGGGACCCCCCAGATGCCGCTGACCCCCAAGCTCCAGCTCAGGAGTGTACCTCTCCAGAGAGCAACGGGTGCCCAGAGCCGAAGAGACCAGGCACCTCCGAGGCAGCTTCTGGAAGCCAGGAGAAGCTGGACTTCAACCGCAACCTCCAGGAGGTGGTTCCGGCCATCGAGAAGCTACTGTCCAGCGACTGGAAGGAGAGGTTTCTGGGAAGAAACTCTGTGGACACCAAAGATGTCAAAGGGACCCAAGAGAGCCTGGCGGAGAAGGAGCTGCAGCTTCTGGTCATGATCCACCAGCTGTCCACCCTGCGGGACCAGCTCTTGACAGCCCACTCAGAGCAGAAGAACATGGCCGCCATGCTGTTCGAGAAGCAGCAGCAGCAGATGGAGCTGGCCCGGCAGCAGCAGGAGCAGATCGCCAAACAGCAGCAGCAGCTGATTCAGCAGCAGCATAAGATCAACCTCCTTCAGCAGCAGATACAGCAGGTCAACATGCCTTATGTCATGATCCCAGCCTTCCCCCCAAGTCACCAGCCTCTGCCTGTCACCCCTGACTCCCAGCTGGCTCTGCCCATCCAGCCCATCCCTTGCAAACCAGTGGAGTACCCGCTGCAGCTGCTGCACAGCCCCCCTGCGCCCGTGGTGAAGAGGCCGGGGGCCATGGGTGCCCACCACCCCCTGCAGGAACCCTCCCAGCCCCTGAACCTCACAGCCAAGCCCAAGGCTCCTGAGCTGCCCAACAGCTCCAGCTCCCCCAGCCTGAAGATGGGCACCTGTGGAGCCCGGCCCCCCAGCCACGGAGCCGCCACACGGGATCGGCCGTGCAGCCCACCCAGCCTGCCTCTGGGCTTCCTGGGTGAAGGGGACGCTGTCACCAAAGCCATCCAGGATGCCCGGCAGCTGCTGCACAGCCGCAGTGGGGCCTTGGAGAGCTCCCCCAGCACCCCCTTCCGCAAGGACCTCATCAGCCTGGACTCGTCCCCAGCCAAGGAGCGGCTGGAGGACAGCTGTGTGCACCCTCTGGATGAAGCCGTGCTGAGCTGTGACCTGGATGGCTCCCGCCACTTCCCCGAGTCCCGAAACCACAGCCACATCAAGAGGCCCATGAATGCCTTCATGGTGTGGGCCAAGGACGAGCGGAGGAAGATCCTCCAAGCTTTCCCAGACATGCACAACTCCAGCATCAGCAAGATACTTGGCTCCCGTTGGAAGTCCATGAGCAACCAGGAGAAGCAGCCCTACTACGAGGAGCAGGCCCGGCTGAGCCGGCAGCACCTGGAGAAGTACCCCGACTACAAGTACAAGCCGCGGCCCAAGCGCACCTGCATCGTGGAGGGCAAGCGGCTGCGGGTAGGCGAGTACAAGGCCCTGATGCGGACCCGGCGCCAGGACGCTCGCCAGAGCTACGTGATCCCCTCACAGGCAGGCCAGGTGCAGATGAGCTCCTCAGACGCCCTGTACCCCCGGGCTGCAGGTGTGGCCCTGGCACAGCCCCTGGTGGATCACTATGTCCCCCAGAGCCTGGACCCCAACATGCCCGTCATTGTCAACACCTGCAGCCTCAGGGAGGAGGGAGAGGGCACCGACGACAGGCACTCGGTGGCGGACGGCGAGATGTACCGGTACAGCGAGGACGAGGACTCGGAGGGCGAGGAGAAGAGTGATGGGGAGCTGGTTGTGCTCACGGACTGA

Related Sequences

XP_004862225.1 Protein

Sox13 PREDICTED: transcription factor SOX-13 isoform X4 [Heterocephalus glaber]

Length: 615 aa      View alignments
>XP_004862225.1
MSMRSPVSARLALDGAGTMVNCTIKAEEKKDPCREDSQGSAAVAEPQPGDPVRDPPDAADPQAPAQECTSPESNGCPEPKRPGTSEAASGSQEKLDFNRNLQEVVPAIEKLLSSDWKERFLGRNSVDTKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKRPGAMGAHHPLQEPSQPLNLTAKPKAPELPNSSSSPSLKMGTCGARPPSHGAATRDRPCSPPSLPLGFLGEGDAVTKAIQDARQLLHSRSGALESSPSTPFRKDLISLDSSPAKERLEDSCVHPLDEAVLSCDLDGSRHFPESRNHSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVIPSQAGQVQMSSSDALYPRAAGVALAQPLVDHYVPQSLDPNMPVIVNTCSLREEGEGTDDRHSVADGEMYRYSEDEDSEGEEKSDGELVVLTD