Details from NCBI annotation

Gene Symbol Rbbp5
Gene Name retinoblastoma binding protein 5, transcript variant X5
Entrez Gene ID 101713301

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBBP5 ENSCPOG00000011763 (Guinea pig)

Gene Details

retinoblastoma binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010579, Guinea pig)

Protein Percentage 99.38%
CDS Percentage 95.03%
Ka/Ks Ratio 0.02336 (Ka = 0.0044, Ks = 0.1901)

RBBP5 ENSG00000117222 (Human)

Gene Details

retinoblastoma binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000264515, Human)

Protein Percentage 99.0%
CDS Percentage 93.72%
Ka/Ks Ratio 0.02582 (Ka = 0.0066, Ks = 0.2563)

Rbbp5 ENSMUSG00000026439 (Mouse)

Gene Details

retinoblastoma binding protein 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027700, Mouse)

Protein Percentage 98.4%
CDS Percentage 90.51%
Ka/Ks Ratio 0.0229 (Ka = 0.0103, Ks = 0.4477)

Rbbp5 ENSRNOG00000021289 (Rat)

Gene Details

retinoblastoma binding protein 5 (Rbbp5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031945, Rat)

Protein Percentage 98.6%
CDS Percentage 90.85%
Ka/Ks Ratio 0.01913 (Ka = 0.0084, Ks = 0.4369)

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location: 6011903..6046929   Strand: +
>XM_004862123.1
ATGAACCTTGAGTTGCTGGAGTCATTTGGGCAGAACTATCCAGAGGAAGCTGATGGGACTTTGGATTGTATCAGTATGGCCCTGACTTGCACCTTTAACAGGTGGGGCACGCTGCTTGCAGTTGGCTGTAATGATGGCAGAATTGTCATCTGGGATTTCTTGACGAGAGGCATCGCTAAAATAATTAGTGCACATATCCATCCAGTCTGTTCTTTGTGCTGGAGTCGAGATGGCCACAAGCTCGTGAGCGCTTCCACCGATAACATTGTGTCACAGTGGGATGTTCTGTCAGGCGACTGTGACCAGAGGTTCCGATTCCCTTCACCCATCTTAAAAGTCCAGTATCACCCACGCGATCAGAACAAGGTTCTCGTGTGTCCCATGAAATCTGCTCCTGTCATGTTGACCCTTTCAGATTCCAAACATGTTGTTCTGCCGGTAGACGATGACTCCGATTTGAACGTGGTGGCATCTTTTGATAGGCGAGGGGAATATATCTATACAGGAAATGCAAAAGGCAAGATTTTGGTCCTAAAAACAGATTCTCAGGATCTTGTTGCTTCCTTCAGAGTAACAACTGGGACAAGCAATACCACAGCCATTAAGTCAATTGAGTTTGCCCGGAAGGGAAGTTGCTTTTTAATTAACACAGCAGATCGAATAATCCGAGTTTATGATGGCAGAGAAATCTTAACCTGTGGCAGAGATGGAGAGCCTGAACCCATGCAGAAACTGCAGGACCTGGTGAATAGGACCCCGTGGAAGAAATGTTGCTTCTCTGGGGATGGGGAGTACATCGTGGCAGGCTCCGCCCGGCAGCACGCACTGTACATCTGGGAGAAGAGCATTGGCAACCTGGTGAAGATTCTCCATGGAACGAGAGGAGAGCTCCTCCTGGATGTAGCATGGCATCCTGTCCGGCCCATCATAGCATCCATCTCCAGTGGAGTAGTATCCATCTGGGCACAAAACCAAGTAGAAAATTGGAGTGCATTCGCACCAGATTTCAAAGAGTTGGATGAAAATGTAGAATATGAGGAAAGGGAATCAGAGTTTGATATTGAAGATGAAGATAAGAGTGAGCCCGAGCAGACAGGGGCGGATGCTGCTGAAGATGAGGAAGTGGATGTCACCAGTGTGGACCCCATTGCTGCCTTCTGTAGCAGTGATGAAGAGCTGGAAGATTCAAAGGCTCTGTTGTATTTACCCATTGCCCCTGAGGTAGAAGACCCAGAAGAAAATCCTTATGGCCCCCCACCAGATGCGGTCCAAACCTCCTTGATGGACGAAGGCGCTAGTTCAGAGAAGAAGAGGCAGTCCTCGGCAGATGGGTCCCAGCCACCCAAGAAGAAACCCAAAACAACCAATATAGAGCTCCAAGGAGTACCAAATGATGAAGTCCATCCACTACTGGGTGTGAAGGGGGATGGCAAATCCAAGAAGAAGCAAGCAGGCCGGCCTAAAGGATCAAAAGTTAATATTCCACAGCAGCTCACTTAA

Related Sequences

XP_004862180.1 Protein

Rbbp5 PREDICTED: retinoblastoma-binding protein 5 isoform X5 [Heterocephalus glaber]

Length: 499 aa      View alignments
>XP_004862180.1
MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKVNIPQQLT