Details from NCBI annotation

Gene Symbol Pm20d1
Gene Name peptidase M20 domain containing 1
Entrez Gene ID 101700861

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PM20D1 ENSCPOG00000007241 (Guinea pig)

Gene Details

peptidase M20 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006524, Guinea pig)

Protein Percentage 82.29%
CDS Percentage 86.72%
Ka/Ks Ratio 0.35108 (Ka = 0.1053, Ks = 0.3)

PM20D1 ENSG00000162877 (Human)

Gene Details

peptidase M20 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000356104, Human)

Protein Percentage 73.59%
CDS Percentage 81.85%
Ka/Ks Ratio 0.41796 (Ka = 0.164, Ks = 0.3923)

Pm20d1 ENSMUSG00000042251 (Mouse)

Gene Details

peptidase M20 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108012, Mouse)

Protein Percentage 74.85%
CDS Percentage 78.0%
Ka/Ks Ratio 0.18766 (Ka = 0.1525, Ks = 0.8126)

Pm20d1 ENSRNOG00000039745 (Rat)

Gene Details

peptidase M20 domain containing 1 (Pm20d1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000009838, Rat)

Protein Percentage 76.85%
CDS Percentage 80.27%
Ka/Ks Ratio 0.17643 (Ka = 0.1292, Ks = 0.7321)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location: 5406376..5428392   Strand: +
>XM_004862076.1
ATGGCTCTGTGGTATCTTTGCGTGTTACTGCTAAATGTCGCCACTGCCTCCAGGTCTCAGGGCCTGTGGGACATGGAGCTACGGGAGACATCGCGAATCCCTTCTCACTTCTGCAGACGGGAGCGCATCGCTATGATAGAGGCGCTACAAGGTGCCATCCAGATTCCAACAGTGTCTTTTAGCCATGAGGAGTCCAACACCACGGCCCTGGCTGAGTTTGGAGAATACATTCAGAGAGTCTTTCCTACAGTGTTCCAAGCCAGCTTTATCAAGCATGAAGTTGTAGGAAACTACAGCCACCTATTCACTGTGCAAGGCTCAGACCCCAGCTTGCAGCCCTACATGCTGTTGGCTCACTTTGATGTCGTGCCTGCCCCTGAGGAAGGCTGGGAGGTGCCACCATTCTCCGGGCTGAAGCGTGATGGCTTCATCCATGGTCGGGGCACGCTGGACAACAAGAACTCCGTCATGGCGATCCTGCAGGCCTTGGACCTCCTGCTGTTCAGAAACTACATCCCACGGAGATCCTTCTTTGTTGCGCTGGGTCACGATGAAGAGGTATCAGGGACAAATGGGGCTCAGAAAATCTCGGCACTGCTACAGGCCAGGGGCGTCCAGCTGGCTTTCATTGTGGATGAGGGCAGCTTCATCTTGAATGGTTTCCTTCCCAGCCTCAAAAAGTCCTTTGCCATGATTTCCGTCACAGAGAAGGGTGCAATGGACCTCATGCTTCAGGTAAATATGACTCCAAGCCACTCTTCAGCTCCTCCGAAGGAGACAAGCATTGGCATCCTGTCAGCTGCCATTAGCCGACTGGAGCAGACCCCAATGCCAAGCATGTTTGGAACCGGGCAGTTGAAGACGATGTTGCAGCAACTGGCAAGCGAGTTTCCCTTCCCTACCAATATAGTCTTGAGCAACCTGTGGCTGTTTCGGCCCATCATAAACAGGTTCTTGGAGAAAAATCCCATAACCAACGCACTGGTCAGGACCACTATGGCACCCACCATGTTCCACGCGGGGGTCAAGGTAAATGTCATCCCACCGGTGGCCCGGGCCATAATCAACTTCCGGATTCACCCTTCACAGACAGTCCGTGAGGTCCTAGAACTCGCCAAGAACATTGTGGCTGATGACCGAGTGCAGTTCCAGGTGCTAAGAGCCTTTGACCCTCTTCCCATCAGTCCCTCTGATGACCAGGCCTTGGGCTACCAGCTGCTCCGCCAGACCATACAGTCCGTCTTCCCGGAAGTCAATGTTGTTGTCCCAGGAACTTGTATTGGCAATACAGACAGCAGACACTACGCAAACCTCACCAATGGCATCTATCTGTTCAATCCCGTCTCTCTGCAGCCTGAGGACTTCAGCAGCATTCACGGAGTCAATGAGAAGATCTCAATCCGAGACTACGAGACCCAGGTGAAATTCATCTTTGAGTTCATCCAGAATGCTGACACGGAATTGGAGGGGATGCCAGACCCCCCTCACCTGCATGATCTGTGA

Related Sequences

XP_004862133.1 Protein

Pm20d1 PREDICTED: probable carboxypeptidase PM20D1 [Heterocephalus glaber]

Length: 500 aa      View alignments
>XP_004862133.1
MALWYLCVLLLNVATASRSQGLWDMELRETSRIPSHFCRRERIAMIEALQGAIQIPTVSFSHEESNTTALAEFGEYIQRVFPTVFQASFIKHEVVGNYSHLFTVQGSDPSLQPYMLLAHFDVVPAPEEGWEVPPFSGLKRDGFIHGRGTLDNKNSVMAILQALDLLLFRNYIPRRSFFVALGHDEEVSGTNGAQKISALLQARGVQLAFIVDEGSFILNGFLPSLKKSFAMISVTEKGAMDLMLQVNMTPSHSSAPPKETSIGILSAAISRLEQTPMPSMFGTGQLKTMLQQLASEFPFPTNIVLSNLWLFRPIINRFLEKNPITNALVRTTMAPTMFHAGVKVNVIPPVARAIINFRIHPSQTVREVLELAKNIVADDRVQFQVLRAFDPLPISPSDDQALGYQLLRQTIQSVFPEVNVVVPGTCIGNTDSRHYANLTNGIYLFNPVSLQPEDFSSIHGVNEKISIRDYETQVKFIFEFIQNADTELEGMPDPPHLHDL