Sequence details NCBI ID: XM_004862057.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pigr
Gene Name polymeric immunoglobulin receptor, transcript variant X1
Entrez Gene ID 101725355

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PIGR ENSCPOG00000009152 (Guinea pig)

Gene Details

polymeric immunoglobulin receptor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008216, Guinea pig)

Protein Percentage 77.52%
CDS Percentage 83.36%
Ka/Ks Ratio 0.26236 (Ka = 0.1288, Ks = 0.4909)

PIGR ENSG00000162896 (Human)

Gene Details

polymeric immunoglobulin receptor

External Links

Gene Match (Ensembl Protein ID: ENSP00000348888, Human)

Protein Percentage 68.98%
CDS Percentage 78.23%
Ka/Ks Ratio 0.30077 (Ka = 0.1937, Ks = 0.6439)

Pigr ENSMUSG00000026417 (Mouse)

Gene Details

polymeric immunoglobulin receptor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027675, Mouse)

Protein Percentage 65.75%
CDS Percentage 74.16%
Ka/Ks Ratio 0.27178 (Ka = 0.2308, Ks = 0.8492)

Pigr ENSRNOG00000004405 (Rat)

Gene Details

polymeric immunoglobulin receptor (Pigr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005853, Rat)

Protein Percentage 63.48%
CDS Percentage 72.86%
Ka/Ks Ratio 0.29114 (Ka = 0.2528, Ks = 0.8682)

Genome Location

Sequence Coding sequence

Length: 2319 bp    Location: 4545520..4562988   Strand: +
Raw sequence   
>XM_004862057.1
ATGATGCTCTCCTTGCTCGTGTCCCTGCTGGCCGTCTTCCCAGTGGTCTCCACGAAAAGCCCCGTATTTGGCCCCGAGGAAGTGAACGCTGTGGAAGGTAGCTCAGTGTCCATTAAGTGCTACTACCCAGCCACCTCAGTCAACAGGCACACTCGGAAGTACTGGTGCCGGCAGGGAGCCAGCGGCAGCTGCATAACCCTCATCTCCTCGGGAGGCTACATCTCCAAGGACTATGTGGGCAGATCCAACCTCACCAACTTCCCAGAAATCGGCGCCTTCGAGGTGAACATCAGCCCCGTCAGCCGGGAAGACTCTGGGCACTACAAGTGTGGCCTGGGCATCAACACCCGAGGCCTCAACTTCGACGTGGGCCTGGAGGTCGTCAAGGATCCCCGGCTCCTGAATAACACTGAGGTCTACACCATGGACTTGGGCAGGACAGTGACCATCACATGCCCTTTCAGAAGTGAGAATGGTGGGAAAAAGAAGTCCTTGTGCAAGAAGACAGGCCAGTCCTGCGAGTTAGTCATCGACTCAGATAAGAATGAGAACCCCAGCTTTGCTGGCAGAGTGCGCTTAGTTATTCAGGGCACCGACCAAGAAGTGTTCAGCGTCGTCATCAACCAGCTGAGAAACAGAGACGCGGGGATGTACGTCTGCCAAGCTGGGGAAGATCCCAGCGGGGACACGAAGAATATCCATCTGCAGGTGCTAGAGCCTGAGCCTGAGCTGGTGTACGGACAACTGAGAGGCTCGGTGACCTTGGACTGCGCCCTGGGCCCTGAGATGGCGAATGTACAAAAATTCCTGTGCCGGGTGAACAAGGATAAATCCTGCGATGTGATCATCAACACCTTGGGGAAGAGGGACCCGGCCTTTGAGGGCAGGATCCTGCTCACCCCCAGGGACCCCAGTGACGGCCACTTCAGTGTGCTGATCACAGGCCTGCAGACGGGGGATGAGGGGGAGTACCTGTGTGGTGCCCACCCGGACGGAGTGCCGCAGGAAGGCTGGCCCCTCCAGGCCTGGCAGCTCTTCGTCAATCAGGAGACCCCAATCCCCCAGACCCCCAGCTTGGTGAAGGGCGTGACAGGCGGCTCTGTGGCTGTGCTCTGCCCCTACGACCCCAAGGAGAGCCAGAGCTTCAAGTACTGGTGTCTCTGGAAAGGGGAGAAGAATGGCCGCTGCCCACTGCTGGTGGAGAGCCAGGGGCTGGTCCAGGAGGAGTTCGAGGGCAGGCTGGCTCTCTACGAGGAGCCAGGCAATGGCTTCTACACGGTCATCCTCAACCAGCTCACCACCCAGGACGCTGGCTTCTACTGGTGCCTCACCAATGGTGACACCCGCTGGAGGACCATGGTGGAGCTCAAGGTTGTAGACGGAGAACCAAGCCTCAAGGTACCAAAGAACACAACTGTTGTGTTGGGACAGACCCTCAAGCTCGACTGCCACTACCCGTGCAAATTCTATGCCTACAAAAAATACTGGTGTAAGTGGAGCAACCAGGGTTGCCGGGCCCTGCCCAGCCAAGATGAAGGTCCCAGCCAGGCCATCGTGGGCTGCGACCAGAACAATCAGAAAGTCTCCCTGACCCTTCAGTCAGTCACCAAGGCGGATGAGGGCTGGTACTGGTGTGGTGTGAAGCAGAACCAAACCTTCGGAGAGACCGTGGCTGTCTATGTGGCAGTGGAGGAGGCAGCAAGGGGGTCTGGAGTCCCCAATCCAGTCAACCCAGTGATTGCAAACAGTGCTCCTGAGGAGGAGGTGGTAAAGCCCCGTGGCAGGGAGGTTGAGAACGAGGTCATTGAGAACAAAGCCGTTCCGAACCCCAGGCTTTTTGCAGAGGAAAGAGTGGTGGAGGATTCAGGAAACCAAGCCAGTGGGAGCAGAGCATCCGTAGATGACAGCAGCTCTCAGGGACAAAGCAGGAGCTCCAAAGTTCTGCTCTCCACCCTGGTACCCCTGGGCCTGGTGCTGGCGCTAGGGACCGTGGCTGTATGGGTGGCCAGAGCCCGGCACCGGAAGAATGTGGACCGCATATCGATTAGAAGCTACCGGACAGACATCAGCATGTCGGACTTCGAGAGCTCCAGAGATTTTGGTGCCAATGACAACATGGGAGCCTCCTCAGTCACTCAGGAGACAGTGCTCGAAGGGAAAGTCGAGGCCATGGCCAACGCCGAGAGCACCACGGACACTGAAGAGCCCAAGAGGGCAAAAAGGTCATCCAAGGAGGAAGCTGACATGGCCTACTCGGCCTTCCTGCTCCAGTCCAGCAGCATTGCTGCCCAGGCCCAGGACGGCCCCAAGGACACCTAA

Related Sequences

XP_004862114.1 Protein

Pigr PREDICTED: polymeric immunoglobulin receptor isoform X1 [Heterocephalus glaber]

Length: 772 aa      View alignments
>XP_004862114.1
MMLSLLVSLLAVFPVVSTKSPVFGPEEVNAVEGSSVSIKCYYPATSVNRHTRKYWCRQGASGSCITLISSGGYISKDYVGRSNLTNFPEIGAFEVNISPVSREDSGHYKCGLGINTRGLNFDVGLEVVKDPRLLNNTEVYTMDLGRTVTITCPFRSENGGKKKSLCKKTGQSCELVIDSDKNENPSFAGRVRLVIQGTDQEVFSVVINQLRNRDAGMYVCQAGEDPSGDTKNIHLQVLEPEPELVYGQLRGSVTLDCALGPEMANVQKFLCRVNKDKSCDVIINTLGKRDPAFEGRILLTPRDPSDGHFSVLITGLQTGDEGEYLCGAHPDGVPQEGWPLQAWQLFVNQETPIPQTPSLVKGVTGGSVAVLCPYDPKESQSFKYWCLWKGEKNGRCPLLVESQGLVQEEFEGRLALYEEPGNGFYTVILNQLTTQDAGFYWCLTNGDTRWRTMVELKVVDGEPSLKVPKNTTVVLGQTLKLDCHYPCKFYAYKKYWCKWSNQGCRALPSQDEGPSQAIVGCDQNNQKVSLTLQSVTKADEGWYWCGVKQNQTFGETVAVYVAVEEAARGSGVPNPVNPVIANSAPEEEVVKPRGREVENEVIENKAVPNPRLFAEERVVEDSGNQASGSRASVDDSSSQGQSRSSKVLLSTLVPLGLVLALGTVAVWVARARHRKNVDRISIRSYRTDISMSDFESSRDFGANDNMGASSVTQETVLEGKVEAMANAESTTDTEEPKRAKRSSKEEADMAYSAFLLQSSSIAAQAQDGPKDT