Sequence details NCBI ID: XM_004862036.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hsd11b1
Gene Name hydroxysteroid (11-beta) dehydrogenase 1, transcript variant X2
Entrez Gene ID 101716800

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HSD11B1 ENSCPOG00000005596 (Guinea pig)

Gene Details

Cavia porcellus hydroxysteroid 11-beta dehydrogenase 1 (Hsd11b1), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005042, Guinea pig)

Protein Percentage 77.7%
CDS Percentage 82.88%
Ka/Ks Ratio 0.3872 (Ka = 0.1477, Ks = 0.3815)

HSD11B1 ENSG00000117594 (Human)

Gene Details

hydroxysteroid (11-beta) dehydrogenase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000355995, Human)

Protein Percentage 73.63%
CDS Percentage 80.82%
Ka/Ks Ratio 0.39319 (Ka = 0.171, Ks = 0.4349)

Hsd11b1 ENSMUSG00000016194 (Mouse)

Gene Details

hydroxysteroid 11-beta dehydrogenase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000016338, Mouse)

Protein Percentage 72.6%
CDS Percentage 76.94%
Ka/Ks Ratio 0.22717 (Ka = 0.1799, Ks = 0.7917)

Genome Location

Sequence Coding sequence

Length: 924 bp    Location: 2293893..2260702   Strand: -
Raw sequence   
>XM_004862036.1
ATGCAAGGGCTCCTCGGGCCAGGTCCCTTTCTGATGGCTTTTCTGAAAAAATACCTCCTCCCCATTCTGATGGTCCTCTTGGCCTACTACTACTATTCTGCACATGAGGAGTTCAGACCAGAGATGCTCCGAGGAAAGAAAGTGATTGTCACAGGGGCCAGCAAGGGGATTGGAAGGGAAATGGCGTATCACCTGGCGAAGATGGGAGCCCATGTGGTGGTGACATCGAGGTCAAAAGAAGCCCTGCAGAAGGTGGTGTCCCGCTGCTCGGAACTCGGCGCGGCCTCCGCACACTACATTGCTGGCACCATGGAAGACATGAACTTCGCGGAACAATTTGTTGCCGAAGCAGGAAAGCTCATGGGGGGACTAGACATGCTCATTCTCAACCACGTCTTCTACTCTCCTATGACTTTTTTCAATCGTGACACTGACATGGTGCGTCGAAGCATGGAGGTCAACTTCCACAGCTTTGTGGTCCTGAGTGCAGCTGCCTTGCCCATGCTGAAGCAGAGCAATGGGAGCATTGGTGTCGTCTCCTCGGTGGCCGGGAAAATACCGCACCCTCTGATTGCTCCCTATTCTGCCAGCAAGTTCGCTCTGGATGGATTCTTCTCGTCCATTAGGAAAGAATTTGCAGTGACCAGAGTCAACGTGTCGATCTCTCTGTGTATCCTCGGCCTCATAGACACAGAGACAGCCATGAAGGGGACTTCTGGGGTTTACGAAGGCTATGCAGCTCCTAAGGAGGAGTGCGCCCTGGAGATCATCAAAGGGACAGCCCTGCGCCAGGAGGAAGTGCACTACAGCTACATGCCCTGGAGCTCAATCCTGCTCCAAAACCCAGGGAGGAAGGTCATGGAGTTCCTCTCCACAAGGATGTTCCGATGGGACAAACTGAAGAGCAACCAGAAATCCCCTTGA

Related Sequences

XP_004862093.1 Protein

Hsd11b1 PREDICTED: corticosteroid 11-beta-dehydrogenase isozyme 1 isoform X2 [Heterocephalus glaber]

Length: 307 aa      
>XP_004862093.1
MQGLLGPGPFLMAFLKKYLLPILMVLLAYYYYSAHEEFRPEMLRGKKVIVTGASKGIGREMAYHLAKMGAHVVVTSRSKEALQKVVSRCSELGAASAHYIAGTMEDMNFAEQFVAEAGKLMGGLDMLILNHVFYSPMTFFNRDTDMVRRSMEVNFHSFVVLSAAALPMLKQSNGSIGVVSSVAGKIPHPLIAPYSASKFALDGFFSSIRKEFAVTRVNVSISLCILGLIDTETAMKGTSGVYEGYAAPKEECALEIIKGTALRQEEVHYSYMPWSSILLQNPGRKVMEFLSTRMFRWDKLKSNQKSP