Details from NCBI annotation

Gene Symbol Traf5
Gene Name TNF receptor-associated factor 5, transcript variant X4
Entrez Gene ID 101704164

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAF5 ENSCPOG00000000508 (Guinea pig)

Gene Details

TNF receptor-associated factor 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000448, Guinea pig)

Protein Percentage 92.65%
CDS Percentage 91.52%
Ka/Ks Ratio 0.14814 (Ka = 0.0379, Ks = 0.2562)

TRAF5 ENSG00000082512 (Human)

Gene Details

TNF receptor-associated factor 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000261464, Human)

Protein Percentage 85.64%
CDS Percentage 85.88%
Ka/Ks Ratio 0.18879 (Ka = 0.0823, Ks = 0.4361)

Traf5 ENSMUSG00000026637 (Mouse)

Gene Details

TNF receptor-associated factor 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082710, Mouse)

Protein Percentage 77.54%
CDS Percentage 79.35%
Ka/Ks Ratio 0.15875 (Ka = 0.1366, Ks = 0.8604)

Traf5 ENSRNOG00000047957 (Rat)

Gene Details

TNF receptor-associated factor 5

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065556, Rat)

Protein Percentage 79.46%
CDS Percentage 78.5%
Ka/Ks Ratio 0.13206 (Ka = 0.1303, Ks = 0.9867)

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location: 921646..878376   Strand: -
>XM_004861995.1
ATGGCTTACTGGGAGGAGCAAGGCGGAGTCCCCTGTGGTTTCATCCGCCAGAACTCCAGCAACTCCATTTCCTTGGACTTTGAGCCCAACGCAGAGTACTGGTTTGTGGAGCAGCTGGAAGAGCGCTACAAATGTGCCTTCTGCCACTCGGTGCTGCACAACCCCCACCAGACGGGCTGCGGGCACCGCTTCTGCCAGCACTGCATCCTGTCCCTGAGAGAATTAAACGCAGTGCCAATCTGCCCTGTAGATAAAGAGGTGATCAAATCTCAGGAGGTGTTTAAAGACAATTGCTGCAAAAGAGAAGTCCTCAATTTATATGTGTATTGCAAAAATGCCCCTGGATGTAATGCCAAGATGATTCTGGGACGATATCAGGACCACCTGCAGCAGTGCCTGTTCCAGGCCATTCCGTGTTCCAACCAGAACTGCCAGGAAGCCGTGCTCCGGAGAGACCTGCAGGAGCACCTGAGCACAAGCTGCCAGTTCCGGGAGGAGAAGTGCCTTTACTGCAAAAAGGACGTAGTGGTAGTCAGTCTCCAGAATCACGAGGAGAACTTGTGTCCTGAGTACCCAGTATCATGTCCCAACAAGTGCTCGCAGATTATTCCAAGAACCGAGGTGGATGAACATCTTGCTGTGTGTCCAGAAGCCGAACAAGACTGTCCTTTCAAGCCCTACGGCTGTGCTGTACAGGGTAAGCGAGGGAACCTGCAAGAGCATGGACAGTCAGCCTTGCGAGAACACATGCTTCTGGTTCTGGAGAAGAACTTCTGCTTGGAGGAGCAGATTTCTGACTTATATAAGAGCCTAGAACAAAAAGAAAGTAAAATCCAGCAGCTAGCAGAAACTGTAAGGAAATTCGAAAAGGAGTTCAAGCAGTTTGCACAGCTGTTTGGCAAAAACGGAAGCGTCCTCTCAAACATACAGGTGCTTGCCAGTCACATCGACAAGTCAGCCTGGCTGGAAGCTCAAGTATGTCAGCTCTCACAGACGGTTAGCCAGCAGCAGCATAAACTTGACATGAGGACTTTGGTGGATGCGGTGGATGCAGTGAGGCAGAAAATCACCCTGTTAGAAACCAATGACCGACGACTAGTTGTTTTAGAAGGGGAGACTAACAAACATGATGCCCACATTAACATTCATAAAGCACAGCTGAATAAAAATGAAGAGAGATTTAAACTGCTCGAGGGTGCCTGCTACAACGGGAAGCTCATTTGGAAGGTGTCAGACTACAAGGTGAAGAAGAGAGAGGCAGTGGATGGGCACACGGTGTCCGTCTTCAGCCAGCCGTTCTACACCAGCCGCTGCGGCTACCGGCTCTGCGCTCGAGCGTATCTGAATGGGGACGGGTCCGGGAAGGGCACACACCTGTCCCTGTACTTTGTGGTGATGCGGGGAGAATTTGACTCACTGCTGCAGTGGCCATTCAGGCAGAGGGTGACCCTGATGCTTTTGGACCAGAGTGGCAAAAAGAACCACATTATGGAGACCTTCAAAGCTGACCCCAATAGCAGCAGTTTTAAGAAACCCGATGGGGACATGAACATTGCATCTGGCTGCCCCCGCTTTGTGGCTCATTCCACGTTGGAGAATGCCAGGAACACCTACATTAAAGATGACACGCTGTTCTTGAAAGTGGCCGTGGACTTGACTGACCTGGAAGAGCTCTAG

Related Sequences

XP_004862052.1 Protein

Traf5 PREDICTED: TNF receptor-associated factor 5 isoform X4 [Heterocephalus glaber]

Length: 558 aa      View alignments
>XP_004862052.1
MAYWEEQGGVPCGFIRQNSSNSISLDFEPNAEYWFVEQLEERYKCAFCHSVLHNPHQTGCGHRFCQHCILSLRELNAVPICPVDKEVIKSQEVFKDNCCKREVLNLYVYCKNAPGCNAKMILGRYQDHLQQCLFQAIPCSNQNCQEAVLRRDLQEHLSTSCQFREEKCLYCKKDVVVVSLQNHEENLCPEYPVSCPNKCSQIIPRTEVDEHLAVCPEAEQDCPFKPYGCAVQGKRGNLQEHGQSALREHMLLVLEKNFCLEEQISDLYKSLEQKESKIQQLAETVRKFEKEFKQFAQLFGKNGSVLSNIQVLASHIDKSAWLEAQVCQLSQTVSQQQHKLDMRTLVDAVDAVRQKITLLETNDRRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVSDYKVKKREAVDGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQRVTLMLLDQSGKKNHIMETFKADPNSSSFKKPDGDMNIASGCPRFVAHSTLENARNTYIKDDTLFLKVAVDLTDLEEL