Details from NCBI annotation

Gene Symbol Lin9
Gene Name lin-9 homolog (C. elegans), transcript variant X1
Entrez Gene ID 101701448

Database interlinks

Part of NW_004624807.1 (Scaffold)

For more information consult the page for NW_004624807.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIN9 ENSCPOG00000015642 (Guinea pig)

Gene Details

lin-9 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014108, Guinea pig)

Protein Percentage 97.49%
CDS Percentage 94.85%
Ka/Ks Ratio 0.0652 (Ka = 0.0123, Ks = 0.1891)

LIN9 ENSG00000183814 (Human)

Gene Details

lin-9 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000329102, Human)

Protein Percentage 96.77%
CDS Percentage 92.83%
Ka/Ks Ratio 0.05839 (Ka = 0.0165, Ks = 0.2834)

Lin9 ENSMUSG00000058729 (Mouse)

Gene Details

lin-9 homolog (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000082959, Mouse)

Protein Percentage 95.76%
CDS Percentage 89.24%
Ka/Ks Ratio 0.04275 (Ka = 0.0213, Ks = 0.4978)

Lin9 ENSRNOG00000023304 (Rat)

Gene Details

Protein Lin9

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065677, Rat)

Protein Percentage 96.13%
CDS Percentage 88.93%
Ka/Ks Ratio 0.0376 (Ka = 0.0197, Ks = 0.5234)

Genome Location

Sequence Coding sequence

Length: 1677 bp    Location: 402710..335336   Strand: -
>XM_004861986.1
ATGCACCGCGGCGGGCAGCCTTTGAAAAAGCGGCGCGGCTCGTTCAAGATGGCGGAGCTCGACCAGTTGCCTGACGAGAGCTCTTCAGCAAAAGCTCTCGTCAGTTTAAAAGAGGGAAGCTTATCTAACACATGGAATGAAAAGTACAGTTCTTTACAGAAAACCCCTGTTTGGAAAGGCAGGAATACAAGCCCTGCGGTTGAAATGCCTTTTAGAAATTCAAAACGAAGTCGACTCTTTTCTGAGGAAGATGATAGACAAATAAATACAAAATCACCTAAAAGAAACCAGAGAGTTGCAATGGTTCCACAGAAATTTACAGCAACAATGTCAACACCAGATAAGAAAGCTTCACAGAAGATTGGTTTTCGATTACGGAACCTACTCAAGCTTCCAAAAGCACATAAATGGTGCATATATGAGTGGTTCTATTCAAATATAGATAAACCACTTTTTGAGGGTGATAATGATTTCTGTGTATGTCTAAAGGAATCTTTTCCTAATTTGAAAACAAGAAAGTTAACAAGAGTAGAATGGGGAAAAATCAGACGGCTTATGGGAAAACCACGGAGATGTTCTTCTGCATTTTTTGAGGAAGAGAGATCAGCATTAAAACAGAAACGGCAGAAAATAAGGCTCTTACAACAAAGGAAAGTTGCAGATGTTTCACAATTCAAAGATCTCCCAGATGAAATTCCTTTACCCTTGGTTATTGGAACCAAAGTTACAGCACGACTGCGTGGCGTTCATGATGGTCTGTTCACAGGACAAATAGATGCTGTGGATACTCTTAATGCTACTTATAGAGTGACTTTTGATAGGGCAGGGCTTGGGACTCATACCATCCCTGACTATGAAGTTCTTAGTAATGAGCCTCATGAAACCATGCCAATCGCTGCCTTTGGACAGAAACAGCGGCCACCTCGATTTTTCATGACCCCGCCACGGTCACATTATACTCCTCCTCTCCAGTCACCAGGTGCAGACAACGATCCTTTATTAGGACAATCACCTTGGAGAAGTAAAATTTCTGGCTCTGACACTGAAACATTGGGTGGTTTTCCAGTAGAATTCCTTATTCAAGTGACTAAATTATCAAAAATTCTCATGATTAAAAAGGAACATATCAAGAAATTAAGGGAAATGAACACAGAAGCAGAAAAACTGAAATCATATTCCATGCCCATTGGCATTGAATTTCAGCGGAGATATGCAACAATTGTTCTAGAGCTTGAACAACTGAATAAGGACCTAAACAAAGTCTTGCATAAAGTTCAACAGTACTGTTATGAGCTTGCTCCGGACCAGGGGCTGCAGCCCGCGGATCAGCCCACAGACCTGCGCCGGCGCTGCGAGGAGGAGGCGCAGGAGATCGTGCGGCTTGCCAACGCCTCAGCCGGACAGCCCTGCGTCGAAAACGGAAGCCTCACAGACTTAATCTCCAGGCTCACAGCTGTCTTACTACAAATTAAGTGTCTAGCAGAGGGAGGAGACCTGAATTCCTTTGAGTTCAAATCACTCACAGACTCATTAAACGACATCAAGAGTACAATAGATGCTTCTAATATCAGTTGCTTTCAGAATAATGTAGAAATCCATGTTGCACATATTCAGAGTGGCCTGAGCCAGATGGGAAACTTACACGCCTTCGCAGCGAATAACACCAACACAGACTGA

Related Sequences

XP_004862043.1 Protein

Lin9 PREDICTED: protein lin-9 homolog isoform X1 [Heterocephalus glaber]

Length: 558 aa      View alignments
>XP_004862043.1
MHRGGQPLKKRRGSFKMAELDQLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKTPVWKGRNTSPAVEMPFRNSKRSRLFSEEDDRQINTKSPKRNQRVAMVPQKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFEGDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKIRLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYRVTFDRAGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPPRFFMTPPRSHYTPPLQSPGADNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTKLSKILMIKKEHIKKLREMNTEAEKLKSYSMPIGIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELAPDQGLQPADQPTDLRRRCEEEAQEIVRLANASAGQPCVENGSLTDLISRLTAVLLQIKCLAEGGDLNSFEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLSQMGNLHAFAANNTNTD