Details from NCBI annotation

Gene Symbol Rttn
Gene Name rotatin
Entrez Gene ID 101726596

Database interlinks

Part of NW_004624806.1 (Scaffold)

For more information consult the page for NW_004624806.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTTN ENSCPOG00000002661 (Guinea pig)

Gene Details

rotatin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002417, Guinea pig)

Protein Percentage 88.01%
CDS Percentage 90.36%
Ka/Ks Ratio 0.29932 (Ka = 0.0669, Ks = 0.2234)

RTTN ENSG00000176225 (Human)

Gene Details

rotatin

External Links

Gene Match (Ensembl Protein ID: ENSP00000255674, Human)

Protein Percentage 85.44%
CDS Percentage 87.4%
Ka/Ks Ratio 0.27493 (Ka = 0.0867, Ks = 0.3152)

Rttn ENSMUSG00000023066 (Mouse)

Gene Details

rotatin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023828, Mouse)

Protein Percentage 80.27%
CDS Percentage 82.43%
Ka/Ks Ratio 0.25268 (Ka = 0.123, Ks = 0.4866)

Genome Location

Sequence Coding sequence

Length: 6720 bp    Location: 11058639..11266576   Strand: +
>XM_004861975.1
ATGGTTCTGACAGTGCTCATCAGGAAACTCGGTCACCAGCTGACTGAGATCAGGGAACGCGCCCTCAAGAGTATTCTCTGCAAGATTGAGCACAACTTAATCTGCCACGCTGATCTAATTCAAGAAAGGCTGCTCTTTCTCCACCTGCTAGAATGGTTCAATTTTCCATCCGTCCCAATGAAAGAGGAGGTTCTGAACCTGTTGAACAGATTGGTTAAGTATCCTCCAGCAGTCCAGCATTTGACTGACCTTGGTGCTGTAGAATTCTTTTCTAAGCTTCGACCTAATGTGGAGCCAGATCTACAGGCTGAAATTGATGGCATTCTAGATGGACTTTTTGTGCTTCCTTTAGAAGCTCCTGCAGTGCATTCTGTCTCTTACCAAAGCAATCAGACTGAATTGTCACAACCTGAAATGGTAACAGGGTATTTTCCCCAAGACAAAAGTAATTTTCAGCAAATGAAAGTGCCTCCTAAACCAGTCGTAAATCAAACTACGAAGTGTTTGAAGTTTTCTACATTTCCTTGGTTACCCCTGACAACTACAGACAGACATGTTCTCTCTTCTAATGAAAGCTCTTTAAGAAGTAGTAATCACACTTTGATCTGGAACACCTGTGAACTTTTGAAGGACGTTATTATGCAAGATTTTCCTGCTGAGATTTTCCTACAAAGGCCAAAAATTGTTCAGAGCCTGTTGTCTCTGTTGAAACTGGCATTTGAAGGAGATGGAAAACATCGCCTGGCTTTGCAGTCAGTGTCTTGCTTGCAGCAGCTGTGCACTTATTTAAGAAATAGACTTAACTTTCACCGAGATCCAAATTTTTTCTCTAATAAACAAGACACAATTTCCCAAAATTCTTCTATGTCTTATTATCATGAAGCAAGAGCTACTCATCATTCTCACAATCAGTCCCCAGGAAGCAGCAGCCCTCGGCCTTCTGTTATTGGGCGCACAGGCCAGCGACCCAGAGGAGATGGCCAGGATTGGGATGCAGTGACCTCAAGTGGAAGTAGTAGTCATGCTCATGTGAACTCTAGGATATCTGTCCATTCACCTTTGGATATGGGACTCATAGATCTGCCAGAGCTGGAAACTGAAGACACTTTGGAACTACAGTTCCAGCAGCTGAGTCTTCCCCAGTTCTGTGTCTCCATTCTGGAATCAGCAGTTCCTCTCTTAAGAACAGGTAGTAGACAAATGATAATAAGAGTTTTGGAATTGCTTGCAGAGAATATGATACTAATTGATGAAGCAATTTCAGCTGATATTTGGGATGACAGCAGCCTTTTTGCTATAGATATGAAAGAGAAGCTGCTACTGGTGTTGGGGTCCTTTGGAGAAACTATGTGTTACCATAAAAGCAGTGTTGGTGTGGAACAACCAGAGGTAATGTTAGTGCACCACAGAATGGCCTTTGTCAGCATTGCACTGTTTGCAGTTCGACTGTTACAAATGCTTCTCCCTGTTGAAAAGGCAAGTGAGTTTTTACCAGAGCCTATGTCAGCAGCATTATTTCTTCTTTCTTTGGACGTGTCTATTTCTTTGGAATATCCAAATATACATGAAACTGTTGTGGCCTATTTGGAACAGCTGAATTCTGAAAACTATAATATTTATAAACGAACTGCAGAGGCTGTTTATTCAATTGAATGTGCCTGTAACTTCCTGTCTGATGTTGGAAAAGAGGGAGAGAAGAATCTTTTAGAATTAGTGGAGCTTGCAGACCACGCCTTGCGTAGCTTTTCCTATCATCAGCATTTTCCCCTAATAAAGGAAATCATCTGCATTTGTTCAAAGATCTGGAAATCTGCCCAGGCCAGTCCATTACTACAAGGAGAAAGTCAGAAGGTACTTCTGCATATGTTGTCTCACCCACTGCCACAAGTGAAGATTGAAACTTATCACTGCTGTCTGGAAATAGTTAAGGAATGTTTAGGTGTTCATAATGTCACTGTACCTGTGTCTTCCCTTTGTAATGGAATCCATTTCCTACTTCACCCAAAAGTTCTATATGAAATCTCTGCATTTGGTATCCAAGAACCCAGAAATGAGGTGAATGCTGCTGCCAAGGCCATTCTGTTGTATCTGCTTCAGGGACGTTTGATGATGACAGCACTGACCTGGAACAAGTTTATTGAGTCTCTGTGTCCAGTCATTCCAGTACTACAGGGCTATGCTGACCCAGAAGATCCTTTGGGTAACTCCATTCTCCTTTTAAGTGAAGCAAATTCTGAGGCAGGGGAAGGGATTCTTCCCTGTACAACACGGTTAAAGTTCATGCTGCGACTTTTGCTAGTGAAAAAGCCATCAGTCCGTTCACTAGCATTAAAGCTTTTAGCATTTCATCTTACAAGTGAAGAAGGGGCTGATACAAAGCGCCCCTTAATAGATGCCAGAGTTCTCTCCAGAGTTACTAATTTATTTATTGTGAAAAAACCTGTTGAACTCAAATTGGATGACAGAAGAGAACTGGTTATTAAGTTGGAGACTATTGAAAAGGTATATGAAGTCTTCACCTCAGATGATGTTGATCTTGCTTTGAGAAAGTCAGCCGCAGAACAGTTAGCTGTGATTATGCAAGATATTAAAATGCATGCTGTGGTGAAAAAGTTATGCTTAACTGACAAGATAATTGAATATTTAAATGAATGTGTGGGTCAAGATGGCAAGGTTATAGAATGTTTGATTCAACCGTCCCTCACACTCTTGAGGAAGGTTTTATGTGCAGATCCACTCATGCGTGTTTCCCTTTCACAGCAGTCTTCTCTCTTGACCCTGTTATTCAGAGTTTCCTTAATATTTCATGAAGATTCTACTATAGTGACTGAAGTTGGAGCACTGTTTTGTCTTCTCCTGTTTGATGAAGTATCAAGAATGGATATGTGGTCGGTTAACACTTCCAGTAAACCTTCTTTACCATCAGCCTTCAGTTTGCCTGTTTCAGTTTTTAGAAGGTATCATCTACCAGTACATACACATGGCCACCATGCTGTGAGTCCTTACTCAATAGTTTTGCCATTATCTGCTGATTATTTGACCTTGAAGCCCGTGTCAGATATGCTGAAAATAGCTTGGAACTTGTCATGGCATCATGGGATTGACAATCTGTTGAAGCAAATGAACTCCGAAAATAAAATCCAAGAATTTTCAGATACATTGAAGTTATCCACAGTGGACATCCTCACTCTGAAGATAACACACACAGCTAGTGGGCTGCAGGACTGCTTCCACTCTATTGTTCAGGCTGCAGCCCACAGGGAAGTTAGGGCTGCTGTCACTAGGATGAGTTTTTATCTTCTGAATGACAAATTGTCCTTAAAGGATGGAACCAGCCCATGTGGGGTTACCTTGAAGTCCTTGGCTTGGCACAGTGCACTAAACAGGTTTTTACAGGTGCTTCCTGCTTGCACTGAAGATGAGAAACTGCTAATAGATATTGTACATTTTTTAAAGAAGTTAATAAAAGAACATAGAAAAAATCCACCAGTTGAACTTCTAAACTGGATTCTAGAATTACTCCTTAGACATAATCCAAACCCCCTGTTAGACCTGCTGGTTCTGACAGAGTCACAGGCACGAGAAGAAACAGATGACATCCGGACTGCTGTCAGACAACAACTGCAAAAAGAACTGATTGCTCTTTTCAATACCTTACTGCTCAGTTTTATGGCAGTTACTGACAGGAAATGCTTGGAACTTCTTTATGTCTTCCAAACCCAGCTGGGTCTAAAACTGCTCCAGTGTCTGAGGATCACAGATGCTCCTCATTTCTATGGGCTGCCTTCCCTGGAGCGGACTTTAAGGGGGATGGCTCACCTCACTGCATTTCCAGGATGGAGTTCACATTCTCCTTCTACAAAGCCACTTGAAATTTGTGTGAAGTACTTGTCAGGACTTCTCGAGGTCATTACTTCTTTTTACGTGGAGCGTGGAGGAAATGCTATGTCATTCATGGGAAAAGGTGTCACAAAGAGCACAATTCTTTGCTTGCTTCACTTATCCCATGAGATGATGGCCCAGGCTCAGAGCTCGGAGTGGATGTCTCTTTGGTTCTTGCCTTTAGGTAATCATAGCGAAGAACATGCTCCTGATCAACAAGGATTGGCTTGGTTGATTCCCTTATGGGTTGATCGGGACCCAGAGGTGAGATTTACTTCTCTGGGATTGGGATCAGCACTGACTATGCTTGAAGCTGGCTGTGTGGCGTTGGCAAACAGTTGTCAGAACATTTCCGGTGGGCTCTGGGGAACTGTTGTGAACATTCTGCTGGACCAGTCGGAATGTAGCATGGTGCGCCGGGAGGCTGCATTTATTCTTCAGAATCTCCTTGTAATTCCAATGCCTACAGAAATTATGAAGGATTTTACTTGGCAGGGCCCCTGTGTCCATGATGAGGATTCTGGCCTATCACTGATAGGAAAACCTGCTCTCCAGGCTCTTTTATACCACTGTCATTTTTATGATCATTTGAATCAGATGGTGAAATGTTGTTACCTGGGACGGTATATGTTTGATTTAAGGTTTTCTGCTTTTAATGCAACTTCAGAAGCTAATGATTTAAATGGTTTAGATGACTCATTCAAGTTTTGGAGGGCTCCATCTAGGATATCCAACCAAGATCAGGATCCAAGTTCTCTCTCCACCTCAGAAACAAGGGTGACACCTTCAGTGGGGAGCGCTGAATTTCAACCACTTGCGCCACCAACAGTGCTTCTCTCTGAAGCCTTGCATGACCAATTCGTGCCCCAAGGTCAGCATGAAATTGCATCATCACAGCCACCTCATGATTCATCCCTGACTGCTCCCCTGCCCAAGCAACGTGTTTTTGTTACTCCATCTCTTCTTTCAGCCATCTGTAGCCTCCTAGACAACCTATTGGTGATTGCTCCCCAAGACACTGCAAATGCTCTCCAACAAGCCCAACTCATAGAGCTTCTCTGTAGCATTGCAGATGCCACCCTTTTAGAGACATGTGTCTGGGAACTCAAGACCTCACTGCCTCCATTACCTCCAGTTGAACATACTCAGGCTCAGGAAATGACTTGGATCCTGGTGCATAAGCTGTGCGGGCCTTTCCCACAGAAGAGGCAGAACAAGGGCTCCATCCACATAGGCTGGTGCAGAGCCCCTATTGTAACCACTGCTTTGCCTGCTCACGTAGATTGGGCTGCTGGTGTGGTTACAAGAGGACTTTTTCCTCAGACCAGAACTCTCTTCAGCTATGTAGAGCTAATATCGGCTTTTTATCACACATGGACACATTTACTTGATCTTCTGGCCACACTCCTGAGGAAAGCTGCAGCTGTCTCTCTCCCTTCCATTACCTCAGCTCTGGCCAAGCACTGGGCTGCAGTTATTGATATGTTCTGCAAATGTGTGGGCTCATCAGTCAGGTATCCTGCTCTTTATACTGCTAGTCTTCAGTTCCTGGCTGTTCTTCTGACTGAGGAAGCAAAAATGAATTTCCAGGACAAGAACAAAACATATTTAGGCCATAGTCCAACAATGGTTTTGCTTCTTGATGAAATCCAGGAAAATCAGAAATCATCAGAACAACTTAATGAAGTAATTCTTCAGTGCTATGAAGGAAAATCCTCCAAAGATATCCTGAAAAGAGTTGCTGCAAATGCATTAATGTCACTTCTGGCCATCAGCAGAAGAGCACAGAAACATGCTTTGAAAGCTGACCTCATAGACAACTGTATGGAACAGATGAAATACATCCATGCACAACTGAATCTCGATTCTCTAAGGCCTGGGAAGGCAGCACTGAAAAAGAAGGAGGATGGTTTTACTAAAGAGTTAAGCATCACTATGCAGCTTCTAAGAAACTGTCTTTATCAAAATAAAGAATGTAAAGAAGCTGCTCTTGGAGCTCAGCTTGTCCCGGTCTTGCACTCTCTCTGGCCTTGGCTTTTAATGGATGATTCATTGTTGCAAATTGCCTTGCAGCTACTTTGTGTCTACACTGCGAATTTTCCAAATGGTTGCAGTTCTCTTTGTTGGTCAAGTTATGGACAACATCCTGTTCAAGCTACGCACAGAGGAGTCCCCAGCAACTCTGTCATGCTCTGTACCCTAAAGCTGGCTTCTCAAATGCCCCTTGAGAACACTGCTCTACAGCAGATGGTTTTTATGTTTCTTTCAAACCTGGCCTTGTCTCATGACTGTAAGGGAGTAATTCAAAAGAGTAACTTCTTACAGAACTTTATGTCTCTATCATTGCCAAAAGGAGGAAATAAACATCTCAGTAATCTGACCATTCTTTGGTTGAAGTTACTCCTGAATTTATCATTTGGAGAAGATGGGCAACAAATGATACTGAGGCTTGATGGCTGTTTAGACTTACTTACAGAGATAAGCAAATACAAGCATAAGAGCAGCCCTTACATACCTCTTCTTATTTTTCATAATATTTGCTTCAGTCCTGCTAATAAGCCCAAAATCCTGGCTAATGAAAAAGTCATTACTACATTAGCTGGCTGTCTGGAAAATGAGAATCAAAATGCCCAGAAGATTGGAGCAGCTGCACTTTGGGCTCTGGTTTATAATTATCAGAAGGCAAAAACAACTTTGAAAAATCCATCAATAAAAAGAAGAGTGGATGAAGCATATTGCTTAGCAAAGAAAACTGTCTCAGACTTAGAAGAAAACTCTCTAAATGCATACTACCTGAAATGTCTTGAAAACCTCGTGCAGCTGCTCAACTCTTCCTGA

Related Sequences

XP_004862032.1 Protein

Rttn PREDICTED: rotatin [Heterocephalus glaber]

Length: 2239 aa     
>XP_004862032.1
MVLTVLIRKLGHQLTEIRERALKSILCKIEHNLICHADLIQERLLFLHLLEWFNFPSVPMKEEVLNLLNRLVKYPPAVQHLTDLGAVEFFSKLRPNVEPDLQAEIDGILDGLFVLPLEAPAVHSVSYQSNQTELSQPEMVTGYFPQDKSNFQQMKVPPKPVVNQTTKCLKFSTFPWLPLTTTDRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKLAFEGDGKHRLALQSVSCLQQLCTYLRNRLNFHRDPNFFSNKQDTISQNSSMSYYHEARATHHSHNQSPGSSSPRPSVIGRTGQRPRGDGQDWDAVTSSGSSSHAHVNSRISVHSPLDMGLIDLPELETEDTLELQFQQLSLPQFCVSILESAVPLLRTGSRQMIIRVLELLAENMILIDEAISADIWDDSSLFAIDMKEKLLLVLGSFGETMCYHKSSVGVEQPEVMLVHHRMAFVSIALFAVRLLQMLLPVEKASEFLPEPMSAALFLLSLDVSISLEYPNIHETVVAYLEQLNSENYNIYKRTAEAVYSIECACNFLSDVGKEGEKNLLELVELADHALRSFSYHQHFPLIKEIICICSKIWKSAQASPLLQGESQKVLLHMLSHPLPQVKIETYHCCLEIVKECLGVHNVTVPVSSLCNGIHFLLHPKVLYEISAFGIQEPRNEVNAAAKAILLYLLQGRLMMTALTWNKFIESLCPVIPVLQGYADPEDPLGNSILLLSEANSEAGEGILPCTTRLKFMLRLLLVKKPSVRSLALKLLAFHLTSEEGADTKRPLIDARVLSRVTNLFIVKKPVELKLDDRRELVIKLETIEKVYEVFTSDDVDLALRKSAAEQLAVIMQDIKMHAVVKKLCLTDKIIEYLNECVGQDGKVIECLIQPSLTLLRKVLCADPLMRVSLSQQSSLLTLLFRVSLIFHEDSTIVTEVGALFCLLLFDEVSRMDMWSVNTSSKPSLPSAFSLPVSVFRRYHLPVHTHGHHAVSPYSIVLPLSADYLTLKPVSDMLKIAWNLSWHHGIDNLLKQMNSENKIQEFSDTLKLSTVDILTLKITHTASGLQDCFHSIVQAAAHREVRAAVTRMSFYLLNDKLSLKDGTSPCGVTLKSLAWHSALNRFLQVLPACTEDEKLLIDIVHFLKKLIKEHRKNPPVELLNWILELLLRHNPNPLLDLLVLTESQAREETDDIRTAVRQQLQKELIALFNTLLLSFMAVTDRKCLELLYVFQTQLGLKLLQCLRITDAPHFYGLPSLERTLRGMAHLTAFPGWSSHSPSTKPLEICVKYLSGLLEVITSFYVERGGNAMSFMGKGVTKSTILCLLHLSHEMMAQAQSSEWMSLWFLPLGNHSEEHAPDQQGLAWLIPLWVDRDPEVRFTSLGLGSALTMLEAGCVALANSCQNISGGLWGTVVNILLDQSECSMVRREAAFILQNLLVIPMPTEIMKDFTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYDHLNQMVKCCYLGRYMFDLRFSAFNATSEANDLNGLDDSFKFWRAPSRISNQDQDPSSLSTSETRVTPSVGSAEFQPLAPPTVLLSEALHDQFVPQGQHEIASSQPPHDSSLTAPLPKQRVFVTPSLLSAICSLLDNLLVIAPQDTANALQQAQLIELLCSIADATLLETCVWELKTSLPPLPPVEHTQAQEMTWILVHKLCGPFPQKRQNKGSIHIGWCRAPIVTTALPAHVDWAAGVVTRGLFPQTRTLFSYVELISAFYHTWTHLLDLLATLLRKAAAVSLPSITSALAKHWAAVIDMFCKCVGSSVRYPALYTASLQFLAVLLTEEAKMNFQDKNKTYLGHSPTMVLLLDEIQENQKSSEQLNEVILQCYEGKSSKDILKRVAANALMSLLAISRRAQKHALKADLIDNCMEQMKYIHAQLNLDSLRPGKAALKKKEDGFTKELSITMQLLRNCLYQNKECKEAALGAQLVPVLHSLWPWLLMDDSLLQIALQLLCVYTANFPNGCSSLCWSSYGQHPVQATHRGVPSNSVMLCTLKLASQMPLENTALQQMVFMFLSNLALSHDCKGVIQKSNFLQNFMSLSLPKGGNKHLSNLTILWLKLLLNLSFGEDGQQMILRLDGCLDLLTEISKYKHKSSPYIPLLIFHNICFSPANKPKILANEKVITTLAGCLENENQNAQKIGAAALWALVYNYQKAKTTLKNPSIKRRVDEAYCLAKKTVSDLEENSLNAYYLKCLENLVQLLNSS