Details from NCBI annotation

Gene Symbol Optn
Gene Name optineurin
Entrez Gene ID 101725616

Database interlinks

Part of NW_004624805.1 (Scaffold)

For more information consult the page for NW_004624805.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OPTN ENSCPOG00000007560 (Guinea pig)

Gene Details

optineurin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006818, Guinea pig)

Protein Percentage 86.76%
CDS Percentage 88.21%
Ka/Ks Ratio 0.20894 (Ka = 0.0717, Ks = 0.3434)

OPTN ENSG00000123240 (Human)

Gene Details

optineurin

External Links

Gene Match (Ensembl Protein ID: ENSP00000368022, Human)

Protein Percentage 81.79%
CDS Percentage 83.95%
Ka/Ks Ratio 0.18336 (Ka = 0.1025, Ks = 0.5588)

Optn ENSMUSG00000026672 (Mouse)

Gene Details

optineurin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110648, Mouse)

Protein Percentage 78.46%
CDS Percentage 81.32%
Ka/Ks Ratio 0.19162 (Ka = 0.1309, Ks = 0.6833)

OPTN ENSRNOG00000017941 (Rat)

Gene Details

optineurin

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045795, Rat)

Protein Percentage 80.74%
CDS Percentage 81.32%
Ka/Ks Ratio 0.1413 (Ka = 0.1153, Ks = 0.8158)

Genome Location

Sequence Coding sequence

Length: 1725 bp    Location: 5683136..5716810   Strand: +
>XM_004861824.1
ATGTCCCACCAAGCTCTCAGCTGCCTGACTGAAAAGGGGGACAGCCCTGGGGAGACCACAGGGAATGGACCCCCCAGTCTGGCTCACCCCAACCTGGACACGTTCACCCCAGAGGAGCTGCTGCAGCAGATGAAAGAGCTCCTGGCTGAGAACCACCAGTTGAAAGAAGCCATGAAGCTAAACAATCAAGCTATGAAAGGGCGATTTGAGGAGCTCTCAGCCTGGACAGAGAGACAGAAGGAAGAACGCCAGTTTTTCGAGATGCAGAGCAAAGAAGCCAAAGAGCGCCTGATGGCCTTGAGTCATGAAAATGAAAAATTGAAGGACGAGCTTGAAAAGCTAAGAGGGGAATCCCGAAGATCATTAGAGGACCTGGCTGGTGCCACGTGGCCTCCCAGGGTGGAAGCAGAGCAGGCGGTAGAGCAGCTGAAAGCAAAGGTGGCTCGGCTCCAGAACGAAAAGGCGGACCTGCTGGGCATTGTCTCCGAGCTGCAGCTCAAGCTCAACGCCAGTGGCTCCTGCGACGACTCCTTTGTAGAAATTCGGATGGCCGAAGAAGCTGAAGGGGCAATGAAAGAAATCAAGAACAGCTGTCCTACCCTCCCAAGAACGGACTCCCCTGACGCGAGAAAATCTGTGGAAGGCACCAGAAAGTATTTGGAATTTGAATTGGAATTAACTGTGAGCCAGCTCCTGCTTTGCCTGAGGGAAGAAAACCAGAAAGTGGAGAGACTTAAAATTGTGCTCAAAGAAGCCAAAGAAAGAATTTCAGAGTTTGAAAAGAAAGCAAATGATCACTCTGAGATTGAGACCCAGACAGAGGTGAACACAGAAAAAGAGAATGAAGAAGAGAAAGACACAGAGACCATTGGAAGTGAAGTGGAAACATTGAACCTTCAGGTGACGTCCCTATTTAAGGAGCTTCAGGAGGCTCATACAAAACTCAGTGAAGCTGAGCTAATGAAGAAGAGACTTCAAGAAAAGTGCCAGGCCCTTGAAAGGAAAAATTCTGCAACTCCATCAGAGTTGACTGAAAAGCAAGAGCTGGTGTATAATAATAAGAAGTTAGAGCTCCAAGTCGAGAGCATGCAGTCAGAAATCAAGATGGAGCAAGTGAAAACAGAAGAAGAAAAGTCCAAGTTAGCCATTCTGCAGTTAACACACAACAAGCTTCTTCAAGAACATAATAATGCATTGAAGACAATTGAGGAACTAACAAGGAAAGAGTCAGAAAAGGTGGACAAGGCAGTGCTGTGGGAACTAAATGAAAAACTAGAGCTGGCAGAGAGGGCCCTGGCCTCCAAGCAGCTTCAGATGGATGAGATGAAGCAGATCATTGCCAAGCAGGAAGAGGACCTGGACACCATGGCAGTGCTTAGGGCTCAGATGGAGGTTTACTGTTCTGATTTTCATGCTGAAAGAGCAGCAAGAGAGAAGATTCATGAAGAAAAGGAGGAACTGGCATTGCAGCTCGCAATTTTGCTGAGAGAGAACAACGCTTTTGAAGATGATGGCAGGCAGTCCCTGATGGAAATGCAGAGCCGGCATGGGGCGAGAACTGGTGACCCTGACCAGCAGGCCGACCTTCTTCAAAGAGGAGCTGACAACAGGAACTGGCAGGAACAGCAGCCCCGGAGCATTCCGATCCACTCTTGCCCCAAGTGTGGGGAGGTCCTGCCTGACATAGACACCTTACAGATCCATGTCATGGACTGCATCATTTAA

Related Sequences

XP_004861881.1 Protein

Optn PREDICTED: optineurin [Heterocephalus glaber]

Length: 574 aa      View alignments
>XP_004861881.1
MSHQALSCLTEKGDSPGETTGNGPPSLAHPNLDTFTPEELLQQMKELLAENHQLKEAMKLNNQAMKGRFEELSAWTERQKEERQFFEMQSKEAKERLMALSHENEKLKDELEKLRGESRRSLEDLAGATWPPRVEAEQAVEQLKAKVARLQNEKADLLGIVSELQLKLNASGSCDDSFVEIRMAEEAEGAMKEIKNSCPTLPRTDSPDARKSVEGTRKYLEFELELTVSQLLLCLREENQKVERLKIVLKEAKERISEFEKKANDHSEIETQTEVNTEKENEEEKDTETIGSEVETLNLQVTSLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSATPSELTEKQELVYNNKKLELQVESMQSEIKMEQVKTEEEKSKLAILQLTHNKLLQEHNNALKTIEELTRKESEKVDKAVLWELNEKLELAERALASKQLQMDEMKQIIAKQEEDLDTMAVLRAQMEVYCSDFHAERAAREKIHEEKEELALQLAILLRENNAFEDDGRQSLMEMQSRHGARTGDPDQQADLLQRGADNRNWQEQQPRSIPIHSCPKCGEVLPDIDTLQIHVMDCII