Sequence details NCBI ID: XM_004861823.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc3
Gene Name coiled-coil domain containing 3
Entrez Gene ID 101725226

Database interlinks

Part of NW_004624805.1 (Scaffold)

For more information consult the page for NW_004624805.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC3 ENSCPOG00000011679 (Guinea pig)

Gene Details

coiled-coil domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010505, Guinea pig)

Protein Percentage 86.58%
CDS Percentage 87.25%
Ka/Ks Ratio 0.11855 (Ka = 0.0685, Ks = 0.5776)

CCDC3 ENSG00000151468 (Human)

Gene Details

coiled-coil domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000368102, Human)

Protein Percentage 89.18%
CDS Percentage 88.31%
Ka/Ks Ratio 0.06284 (Ka = 0.0485, Ks = 0.7715)

Ccdc3 ENSMUSG00000026676 (Mouse)

Gene Details

coiled-coil domain containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027988, Mouse)

Protein Percentage 85.24%
CDS Percentage 83.76%
Ka/Ks Ratio 0.0524 (Ka = 0.0691, Ks = 1.3185)

Ccdc3 ENSRNOG00000017933 (Rat)

Gene Details

Protein Ccdc3

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024110, Rat)

Protein Percentage 84.87%
CDS Percentage 83.52%
Ka/Ks Ratio 0.05163 (Ka = 0.0706, Ks = 1.3675)

Genome Location

Sequence Coding sequence

Length: 816 bp    Location: 5574181..5465703   Strand: -
Raw sequence   
>XM_004861823.1
ATGCTGCGCCCGCTGCTGCTCGCCGCGCTCTGCCTGGCCGGCCGCCCCGCGCGCGCCTGCCTGCTGCCCTCCGACTGGAGGCCCCTGAGCGAGGGCTGCCGCGCGGAGCTGGCCGAGACCATCGTGTACGCGCGCGTGCTGGCGCTGCACCCCGAGGCGCCCGGCCTCTACAACCACCTGCCCTGGCAGCACCAGGCCGGCCAGCGCGCGCTGCTCTACTCGGCCGAGGTGGAGATGCTGTGCGACCAGGCGTGGGGCGGCATGCTGGAGGTGCCCGCCGGCTCTCGGCTCAACCTCTCCGGCCTGGGTTACTTCTCCTGCCACTCGCACAGTGTGGTGCAGGGCTACTCCTACTTCTTCTTCCTCAGGATGGATGAAAACTATAACCTCTTGCCTCATGGAGTTAACTTCCAAGATGCCATCTTTCCGGATACACAAGAGAACAGAAGGATGTTTTCCAGTCTCTTCCAGTTTGCCAACTGTTCCCAAGGACAGCAGCTTGTGACTTTCTCCAGTGACTGGGAGATCCAGGAAGACAACAGGCTCCTGTGCTCCTCCGTGCAGAAGGCCCTGTTCGAGGAGGAGGACCACGTCAAGAAACTGCAGCAGCAGGTGGCGGCCCTGGAGAAGCGGAACAAGCAGCTGCGCGAGCGTCTGAAAAAAGTCAAGCGGTCGCTGCGGCAGGCCCGGAAGCACGGGCGCCGCCTGGAACTGGACAACCGGAAGCTGAGCGAGAAGCTGGCCGCGCCGGGCGCGCTCCCGCACATCAACGCCCTGGGGCGCGAGGCCGCGCGCGCCCCCTACCTGCGTGGGTAG

Related Sequences

XP_004861880.1 Protein

Ccdc3 PREDICTED: coiled-coil domain-containing protein 3 [Heterocephalus glaber]

Length: 271 aa      View alignments
>XP_004861880.1
MLRPLLLAALCLAGRPARACLLPSDWRPLSEGCRAELAETIVYARVLALHPEAPGLYNHLPWQHQAGQRALLYSAEVEMLCDQAWGGMLEVPAGSRLNLSGLGYFSCHSHSVVQGYSYFFFLRMDENYNLLPHGVNFQDAIFPDTQENRRMFSSLFQFANCSQGQQLVTFSSDWEIQEDNRLLCSSVQKALFEEEDHVKKLQQQVAALEKRNKQLRERLKKVKRSLRQARKHGRRLELDNRKLSEKLAAPGALPHINALGREAARAPYLRG