Sequence details NCBI ID: XM_004861806.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Epc1
Gene Name enhancer of polycomb homolog 1 (Drosophila), transcript variant X1
Entrez Gene ID 101718758

Database interlinks

Part of NW_004624805.1 (Scaffold)

For more information consult the page for NW_004624805.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EPC1 ENSCPOG00000002494 (Guinea pig)

Gene Details

enhancer of polycomb homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002273, Guinea pig)

Protein Percentage 96.94%
CDS Percentage 95.92%
Ka/Ks Ratio 0.11683 (Ka = 0.0145, Ks = 0.124)

EPC1 ENSG00000120616 (Human)

Gene Details

enhancer of polycomb homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000263062, Human)

Protein Percentage 97.07%
CDS Percentage 95.46%
Ka/Ks Ratio 0.09891 (Ka = 0.0144, Ks = 0.1454)

Epc1 ENSMUSG00000024240 (Mouse)

Gene Details

enhancer of polycomb homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028100, Mouse)

Protein Percentage 91.61%
CDS Percentage 87.07%
Ka/Ks Ratio 0.09527 (Ka = 0.0467, Ks = 0.4901)

Epc1 ENSRNOG00000014834 (Rat)

Gene Details

Protein Epc1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019968, Rat)

Protein Percentage 93.82%
CDS Percentage 88.22%
Ka/Ks Ratio 0.06443 (Ka = 0.031, Ks = 0.4806)

Genome Location

Sequence Coding sequence

Length: 2361 bp    Location: 4756807..4653736   Strand: -
Raw sequence   
>XM_004861806.1
ATGGAACATCATCTTCAGCGGGCTATTTCAGCACAGCAGGTATATGGAGAGAAGAGGGATAATATGGTTATACCAGTCCCGGAGGCAGAAAGTAATATTGCTTACTATGAATCTATATATCCTGGGGAATTTAAGATGCCAAAGCAGCTCATTCACATACAGCCTTTTAGTTTGGATGCTGAACAGCCTGATTATGATTTGGATTCTGAAGATGAAGTATTTGTGAATAAATTGAAAAAGAAAATGGACATCTGTCCATTGCAATTTGAGGAGATGATTGATCGTCTGGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCAAACTGCTACTAAAAGAAGATGATGAATTAATTAGAGAAGTTTATGAATACTGGATTAAAAAGAGAAAAACCTGTCGAGGGCCGTCTCTAATTCCATCAGTAAAACAGGAGAAGCGAGATGGTTCCAGCACAAACGATCCTTATGTGGCTTTTAGGAGACGCACGGAAAAAATGCAGACTCGAAAAAATCGCAAAAATGATGAAGCCTCTTATGAAAAAATGCTTAAGCTGCGTCGAGATCTGAGTCGGGCTGTCACTATTCTAGAGATGATAAAAAGAAGAGAAAAGAGTAAAAGGGAGCTATTGCATTTAACACTGGAGATTATGGAAAAGAGGTATAATCTGGGTGACTACAGTGGAGAGATCATGTGTGAGGTCATGGCTCAGAGACAGCCAATGAAACCTACTTACGCTGTCCCCATCATTCCCATTACTAATAGCAGTCAGTTTAAACATCAGGAAGTGATGGATGTGAAGGAGTTTAAAGTCAATAAGCAAGATAAAGCCGATATTGTCCGACCGAAACGGAAATATGAAAAGAAGCCCAAAGTCTTACCATCGTCTGCTGCTGCTACTCCTCAACAGACGAGTCCTGCTGCACTGCCAGTCTTTAATGCTAAAGATTTAAATCAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTCTTCGGAAGCTGAGGAAGAGAATGATCCTGATGGTCCTTTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTATGCTCCTCACTTAGACCAAACTGGCAACTGGCCTTGGACTAGTCCTAAAGATGGAGGATTAGGGGATGTGCGATACAGATACTGCTTAACTACTCTCACTGTGCCCCAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGGCGCGGTGGAAGGGTCTTCCTGGACAGAGCTCATTCAGACTATGACAGTGTATTTCGCCATCTGGATTTGGAAATGCTTTCCTCACCACAACATTCTCCAGTCAATCAGTTTGCCAATACCTCAGAAACAAATACCTCGGACAGATCTTTCTCTAAAGACCTCAGTCAGATACTAGTCAATATCAAATCATGTAGATGGCGGCATTTTAGGCCTCGGACACCATCGCTGCATGACAGTGACAGTGATGAACTCTCCAGTAGGAAATTATATAGGAGTATAAATCGGACAGGCACAGCACAACCCGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGCGGTTCAACACACTTTGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAACTGGCACTAATGCAGAAACAGCAGCTTGCACAAATACAGCAACAGCAAGCAAATAGTAATTCCTCCACCAACACTTCACAGAACCTTGCATCTAACCAGCAAAAAAGTGGCTTTCACCTGAACATACAGGGTTTAGAAAGAACATTACAGGGTTTTGTTTCTAAGACTTTGGATTCTGCTAGTGCTCAGTTTGCTGCTTCTGCTTTGATGACATCAGAACAACTGATGGGATTCAAGATGAAGGATGATGTGGTGCTTGGAATTGGGGTGAATGGCGTCCTTCCAGCCTCAGGACTGTACAAGGGCTTACACCTCAGTAGTACTACGCCAACAGCACTTGTACATACAAGTCCATCAGCAGCAGGTTCAGCTTTGTTACAGCCTTCGAATATTACTCAGACTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTGACTGCTGCCAATTCTGCGACAACTCAGGTTCTGTTTGGGAACAACATTCGATTAACTGTACCTTCATCAGTTGCCACTGTAAACTCTATTGCCCCAATGAATGCACGACATATACCTAGGACTTTAAGTGCTGTTCCATCATCTGCCTTAAAGCTGGCTACCACAGCAAACTGTCAAGTCTCTAAGGTCCCATCTTCATCCTCAGTAGATTCAGTTCCAAGGGAAAATCACGAATCAGAAAAGCCAGCACTGAACAACATAGCAGACAATACAGTAGCGATGGAGGTGACGTAG

Related Sequences

XP_004861863.1 Protein

Epc1 PREDICTED: enhancer of polycomb homolog 1 isoform X1 [Heterocephalus glaber]

Length: 786 aa      View alignments
>XP_004861863.1
MEHHLQRAISAQQVYGEKRDNMVIPVPEAESNIAYYESIYPGEFKMPKQLIHIQPFSLDAEQPDYDLDSEDEVFVNKLKKKMDICPLQFEEMIDRLEKGSGQQPVSLQEAKLLLKEDDELIREVYEYWIKKRKTCRGPSLIPSVKQEKRDGSSTNDPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKRREKSKRELLHLTLEIMEKRYNLGDYSGEIMCEVMAQRQPMKPTYAVPIIPITNSSQFKHQEVMDVKEFKVNKQDKADIVRPKRKYEKKPKVLPSSAAATPQQTSPAALPVFNAKDLNQYDFPSSDEEPLSQVLSGSSEAEEENDPDGPFAFRRKAGCQYYAPHLDQTGNWPWTSPKDGGLGDVRYRYCLTTLTVPQRCIGFARRRVGRGGRVFLDRAHSDYDSVFRHLDLEMLSSPQHSPVNQFANTSETNTSDRSFSKDLSQILVNIKSCRWRHFRPRTPSLHDSDSDELSSRKLYRSINRTGTAQPGTQTCSTSTQSKSSSGSTHFAFTAEQYQQHQQQLALMQKQQLAQIQQQQANSNSSTNTSQNLASNQQKSGFHLNIQGLERTLQGFVSKTLDSASAQFAASALMTSEQLMGFKMKDDVVLGIGVNGVLPASGLYKGLHLSSTTPTALVHTSPSAAGSALLQPSNITQTSSSHSALSHQVTAANSATTQVLFGNNIRLTVPSSVATVNSIAPMNARHIPRTLSAVPSSALKLATTANCQVSKVPSSSSVDSVPRENHESEKPALNNIADNTVAMEVT