Sequence details NCBI ID: XM_004861801.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgap12
Gene Name Rho GTPase activating protein 12, transcript variant X1
Entrez Gene ID 101716449

Database interlinks

Part of NW_004624805.1 (Scaffold)

For more information consult the page for NW_004624805.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGAP12 ENSCPOG00000005846 (Guinea pig)

Gene Details

Rho GTPase activating protein 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005274, Guinea pig)

Protein Percentage 92.01%
CDS Percentage 90.94%
Ka/Ks Ratio 0.15288 (Ka = 0.0426, Ks = 0.2788)

ARHGAP12 ENSG00000165322 (Human)

Gene Details

Rho GTPase activating protein 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000345808, Human)

Protein Percentage 91.06%
CDS Percentage 89.43%
Ka/Ks Ratio 0.11445 (Ka = 0.0437, Ks = 0.3821)

Arhgap12 ENSMUSG00000041225 (Mouse)

Gene Details

Rho GTPase activating protein 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000138585, Mouse)

Protein Percentage 88.17%
CDS Percentage 86.5%
Ka/Ks Ratio 0.11491 (Ka = 0.0597, Ks = 0.5197)

Arhgap12 ENSRNOG00000017791 (Rat)

Gene Details

Rho GTPase activating protein 12 (Arhgap12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024022, Rat)

Protein Percentage 89.27%
CDS Percentage 85.83%
Ka/Ks Ratio 0.11425 (Ka = 0.0647, Ks = 0.5661)

Genome Location

Sequence Coding sequence

Length: 2520 bp    Location: 4383718..4283211   Strand: -
Raw sequence   
>XM_004861801.1
ATGGAGATGGCTGATGGAAGTGGGAAGACTGTTCCAGGCCAAGTATACATTGAAGTGGAGTATGACTATGCGTACGAAGCAAAGGGCAGAAGGGTGGTGATAAAACAAGGGGAACGCTACATCTTGGTGAAAAAGACCAATGACGACTGGTGGCAAGTCAAACCGGATGAGAATTCCAGAGCCTTTTACGTGCCGGCCCAGTATGTGAGGGAGCTCACCCGCAGAGCCCTGATGCCGCCTGTGAAGCAGGCCGCCGGACTGCCAAACAGTTCTGTGAAAACGATCCAGAGTCTGCATCTTCAGAGATCCACAGAGAATGTGAACAAACTGCCTGAGCTTTCGAGTTTCGGAAAGCCCTCACCGTCTGCTCAGGGAACAGGTCTCATTCGTGATGCCAATCAGAATTTTGGACCCAGCTGTAATCCAGGTCAAATTCTCACCCTAAGCCTGGACATGACCCACAACAACGGAAAGTTGAACAGTGACTCACACTCTCCCAAAGTTTCCAGCCAGAACAGGACGCGCTTACTTGGTCACTTTCCTGGTCAGGAGTTCTTGGACGTAGAGAAAACTAGCTTCTCCCAGGAGTCGTGCGATTCAGCAGGAGAAAGCTCAGAGAGATTACATCAAGATTCTGAATCTGGAGACGAGCTTAGCAGCAGCTCCACCGAACAGATAAGGGCAAATACACCTCCAAATCAAGGAAGGCCAGATTCTCCTGTGTATGCCAACCTACAAGAACTGAAAATATCCCAGTCTGCTCTGCCTCCCCTTCCTGGGAGTCCAGCAGTTCAGATTAATGGAGAGTGGGAAACGCATACAGATAGTTCAGGGCGTTGTTACTACTATAACCGAGGGACACAGGAAAGGACTTGGAAACCACCCCGATGGACCCGGGATGCAAGCATGAGCAAAGATTTCCACAGTCAAGGAGATCCAGAGCTTCTTTCATCAGAAGAAAACTACCACAGCATTTGTTACAGCCAGTCAGATAGTCAGTGTGGTTCTCCTCCAAGGGGTTGGTCAGAAGAGTTGGATGAACATGGGCATACCTTATATACCAGTGACTATACTAATGAAAAGTGGCTCAAGCATGTCGATGACCAAGGTAGACAGTACTACTACAGCGCGGACGGATCTCGGTCTGAGTGGGAGCTGCCGAAGTATAATGCTGCATCCCAGCAGCAAAGAGAAATAATTAAAAGTAGGAGCCTGGACAGGCGGCTGCAAGAACCAATAGTATTAACAAAGTGGAGACATAGCACCATTGTATTGGACACCAATGACAAGGAATCTCCAACTGCCTCAAAACCCTGCTCTCCTGAAAATGAATCTTCTCCCTCTTCACCAAAGCACCAAGACCCAGGTCAAGAGAAGTATGGATTGTTAAATGTAACAAAAATTACTGAAAATGGGAAGAAGGTCCGAAAGAGCTGGCTGTCTTCCTGGGCAGTGTTGCAGGGCTCGTCTTTACTTTTTACTAAAACTCAAGGAAGCAGTACAAGTTGGTTTGGGAGTAATCAGTCCAAGCCAGAGTTCACAGTGGACCTCAAAGGGGCAGCAATCGAGATGGCCTCAAAGGACAAATCCAGCAAGAAGAATGTATTTGAGCTGAGAACTCGCCAGGGCACAGAACTGCTAATTCAGTCTGATAATGATGCCATCATTAGTGATTGGTTTAAAGTTCTTAGCAGTACCATCAGTAACCAGGCAGTAGAAACTGATGAAGCAATGGAAGAGGAGATACCAGATTCACCAGGAATAGAAAAGCAGGATAAAGAAAAGGACCAGAAGGATCTTAAAAAACTTCGTTCTATGAAAGTATCTAGCATAGATTCTTCAGAACAGAAAAAAACCAAGAAGAACTTAAAGAAGTTTCTTACACGACGCCCCACTTTGCAGGCTGTGCGTGAAAAAGGTTATATTAAAGATCAAGTATTTGGAGCCAATCTTGCTGATTTGTGTCAGAGAGAGAATGGCACAGTGCCAGAATTTGTGAGGCTGTGCATCGCGCATGTTGAACAACAGGGTTTGGGTGTCGACGGGATCTACAGAGTAAGCGGCAACCTCGCTGTGATCCAGAAGCTGAGGTTTGCAGTCAACCATGATGAGAAATTGGATTTGAATGACAGCAAATGGGAAGACATTCACGTCATCACTGGAGCACTCAAAATGTTTTTTCGAGAGTTGCCAGAGTCTCTATTTACATTTAATCATTTTAATGACTTTGTTAATGCAATTAAACAAGAACCAAGACAGCGCGTTGCTGCTGTTAAGGATATAATCAGACAGCTGCCAAAACCAAATCAAGATACAATGCAGGTTCTTTTTAGACATCTCAAAAGAGTTATAGAAAATGGAGAAAAAAACCGAATGACCTATCAGAGTATAGCAATTGTTTTTGGTCCCACTCTATTAAAGCCAGAAAAAGAGACTGGTAATATAGCAGTTCATACTGTTTACCAAAATCAGATTGTAGAATTAATTCTTCTGGAATTAAGTTCCATCTTCGGACGTTGA

Related Sequences

XP_004861858.1 Protein

Arhgap12 PREDICTED: rho GTPase-activating protein 12 isoform X1 [Heterocephalus glaber]

Length: 839 aa      View alignments
>XP_004861858.1
MEMADGSGKTVPGQVYIEVEYDYAYEAKGRRVVIKQGERYILVKKTNDDWWQVKPDENSRAFYVPAQYVRELTRRALMPPVKQAAGLPNSSVKTIQSLHLQRSTENVNKLPELSSFGKPSPSAQGTGLIRDANQNFGPSCNPGQILTLSLDMTHNNGKLNSDSHSPKVSSQNRTRLLGHFPGQEFLDVEKTSFSQESCDSAGESSERLHQDSESGDELSSSSTEQIRANTPPNQGRPDSPVYANLQELKISQSALPPLPGSPAVQINGEWETHTDSSGRCYYYNRGTQERTWKPPRWTRDASMSKDFHSQGDPELLSSEENYHSICYSQSDSQCGSPPRGWSEELDEHGHTLYTSDYTNEKWLKHVDDQGRQYYYSADGSRSEWELPKYNAASQQQREIIKSRSLDRRLQEPIVLTKWRHSTIVLDTNDKESPTASKPCSPENESSPSSPKHQDPGQEKYGLLNVTKITENGKKVRKSWLSSWAVLQGSSLLFTKTQGSSTSWFGSNQSKPEFTVDLKGAAIEMASKDKSSKKNVFELRTRQGTELLIQSDNDAIISDWFKVLSSTISNQAVETDEAMEEEIPDSPGIEKQDKEKDQKDLKKLRSMKVSSIDSSEQKKTKKNLKKFLTRRPTLQAVREKGYIKDQVFGANLADLCQRENGTVPEFVRLCIAHVEQQGLGVDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFRELPESLFTFNHFNDFVNAIKQEPRQRVAAVKDIIRQLPKPNQDTMQVLFRHLKRVIENGEKNRMTYQSIAIVFGPTLLKPEKETGNIAVHTVYQNQIVELILLELSSIFGR