Sequence details NCBI ID: XM_004861741.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ubr1
Gene Name ubiquitin protein ligase E3 component n-recognin 1
Entrez Gene ID 101719904

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

UBR1 ENSCPOG00000009629 (Guinea pig)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008643, Guinea pig)

Protein Percentage 94.45%
CDS Percentage 93.94%
Ka/Ks Ratio 0.17121 (Ka = 0.0296, Ks = 0.1729)

UBR1 ENSG00000159459 (Human)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000290650, Human)

Protein Percentage 93.68%
CDS Percentage 91.97%
Ka/Ks Ratio 0.11497 (Ka = 0.031, Ks = 0.2696)

Ubr1 ENSMUSG00000027272 (Mouse)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028728, Mouse)

Protein Percentage 91.28%
CDS Percentage 87.38%
Ka/Ks Ratio 0.09226 (Ka = 0.046, Ks = 0.4981)

Ubr1 ENSRNOG00000037207 (Rat)

Gene Details

ubiquitin protein ligase E3 component n-recognin 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015086, Rat)

Protein Percentage 88.27%
CDS Percentage 85.64%
Ka/Ks Ratio 0.13544 (Ka = 0.0684, Ks = 0.5049)

Genome Location

Sequence Coding sequence

Length: 5394 bp    Location: 10196883..10033908   Strand: -
Raw sequence   
>XM_004861741.1
ATGGACCCAGATTTGGAAAAGCAAGAAGAGAATGTACAGTTATCAATATTTTCTCCGTTGGAATGGTACTTATTTGGAGAAGATCCAGATATTTGCTTAGAGAAATTGAAACATAGTGGAGCTTTTCAACTCTGTGGGAAGGTTTTCAAAAGTGGAGAGACAACATATTCTTGTAGGGACTGTGCAATTGATCCAACATGTGTACTCTGTATGGACTGCTTCCAGAATAGTGTTCATAAAAATCATCGCTATAAGATGCATACTTCTACTGGAGGAGGGTTTTGTGACTGTGGAGACATGGAGGCCTGGAAAACTGGCCCTTTTTGTATGAATCATGAACCTGGAAGAGCAAGTACTACAAAAGAGAATTCACATTGTCCATTGAATGAAGAGGTAATTGCTCAAGCCAGGAAAATATTTCCTTCAGTAATAAAATACATTGTAGAACTGACTATATGGGAAGAGGAAAAACAACTGCCTCATGAACTACGGATAAGGGAGAAAAATGAAAGATACTATTGTGTTCTTTTCAACGATGAACACCATTCATATGACCATGTCATATACAGTCTACAGAGAGCTCTTGACTGTGAACTTGCAGAGGCCCAATTGCATACCACTGCCATAGACAAAGAGGGTCGTCGAGCTGTCAAAGCAGGGACTTATGCTGCTTGCCAAGAAGCAAAGGAAGATATAAAGAGTCATTCAGAAAATGTTTCTCAACATCCACTTCATGTAGAAGTATTACACTCTGAAGTTATGGCTCATCAGAAATTTGCTTTGCGTCTTGGTTCCTGGATGAACAAAATTATGAGCTATTCAAGTGATTTTAGGCAGATATTTTGCCATGAATGTCTTAGAGAAGAACCTGGCTCTGAGAATCCCTGTCTCATAAGCAGGTTAATGCTTTGGGATGCAAAGCTGTATAAAGGTGCCCGTAAGATCCTTCATGAGTTGATCTTCAGCAGTTTTTTTATGGAGATGGAATACAAAAAACTCTTTGCTGTGGAATTTGTGAAGTATTATAAACAACTGCAGAAAGAATACATCAGTGATGATCATGACAGGAGCATCTCTATAACTGCACTCTCAGTTCAGATGTTCACTGTGCCTACTCTGGCTCGACATCTTATTGAAGAGCAGAATGTTATCTCTGTCATTACTGAAACTCTGCTAGAAGTTTTACCTGAGTACTTGGACAGGAACAATAAATTCAACTTCCAGGGGTATAGCCAGGACAAATTGGGAAGAGTATATGCAGTAATATGTGACCTAAAGTATATCCTGATCAGCAAGCCCACAATATGGACAGAAAGATTAAGAATGCAGTTCCTTGAAGGTTTTCGATCTTTTCTGAAGATACTTACCTGTATGCAGGGAATGGAAGAAATCAGAAGACAGGTTGGGCAACACATTGAAGTAGATCCTGACTGGGAGGCTGCCATTGCTATACAGATGCAGTTGAAAAATATTTTACTCATGTTCCAAGAGTGGTGTGCCTGTGATGAAGAACTCTTACTGGTGGCTTATAAAGAATGTCACAAAGCTGTGATGAGGTGCAGCACAAGTTTCATGACTGGTAGCAAGACAGCAATACAGCTGTGTGGTCATACTCTGGAAACCAGGTCCTACAGGGTATCTGAGGATCTTGTGAGCATCCATCTGCCACTCTCTAGGACTCTTGCTGGTCTTCATGTACGTTTAAGCAGACTGGGTGCTGTCTCAAGACTGCATGAATTTGTACCTTTTGAGGACTTGAAAGTAGAGGTGCTAGTGGAATATCCTTTGCGTTGTCTGGTGTTGGTTGCCCAGGTAGTTGCTGAGATGTGGCGAAGAAATGGGCTGTCTCTTATTAGCCAGGTATTTTATTACCAAGACGTTAAGTGCAGAGAAGAAATGTATGATAAAGATATTATCATGCTTCAGATTGGTGCATCTTTAATGGACCCTAACAAGTTTTTGTTACTGATACTTCAGAGGTATGAGCTTGCTGATGCTTTTACCAAGACCATATCCACAAAAGATCAGGATTTAATTAAGCAGTATAATACATTAATAGAAGAAATGCTTCAGGTCCTCATCTATGTTGTGGGAGAGCGGTATGTACCTGGAGTGGGAAGTGTGACCAAAGAAGAGGTCATAATGAGAGAAATTGTTCACTTGCTTTGCATTGAGCCCATGCCACACAGTGCTATTGCCAAAAATTTGCCTGAGAATGAAAATAATGAAACTGGCTTAGAGAATGTCATAAACAAAGTGGCCACATTTAAGAAACCAGGTGTATCAGGCCATGGAGTTTATGAACTGAAAGATGAATCACTGAAAGACTTTAATATGTACTTTTATCATTACTCCAAAACACAGCATAGCAAGGCTGAACATATGCAGAAGAAAAGGAGAAAACAAGATAATAAAGATGAAGCACTGCCGCCACCGCCTCCTCCTGAGTTCTGTCCTGCTTTCAGCAAAGTAGTTAACCTTCTCAGCTGTGACATTATGATGTACATCCTCAGGACCATATTTGAACGTGCAGTAGACACAGATTCTAACTTGTGGACTGAAGGAATGCTCCAAATGGCATTCCATATTCTGGCACTGGGTCTATTGGAAGAGAAGCAGCAGCTTCAAAAAGCTCCTGAAGAAGAAGTAACATTTGACTTTTACCATAAGGCTTCAAGATTAGGAAGTTCAGCCATGAATGCTCAGAATATACAAATGCTTTTGGAAAAACTCAAAGGAATTCCCCAGTTAGAAGGCCAGAAGGACATGATAACATGGATACTCCAGATGTTTGACACAGTGAAGCGATTAAGAGAAAAATCTTGTTTAATTGTAGCAACTACTTCAGGACTGGAATCTATTAAGAACGATGAGATTATTCATGATAAAGAAAAAGCAGAAAGAAAAAGAAAAGCTGAAGCTGCTAGGCTGCATCGCCAGAAAATCATGGCTCAAATGTCCGCCTTACAGAAGAACTTCATTGAAACTCACAAACTCATGTATGACACCACATCAGAAATGCCTGGGAAGGAAGACTCCATCATGGAGGAAGACAGCACCCCAGCAGTCAGTGACTACTGCAAAATTGCTTTGGGTCCTAAACGGGGTCCAACTGTTACTGAAAAGGAGGTGCTGACATGCATCCTCTGCCAAGAAGAACAAGAGGTGAAAATAGAAAATAATCCCATGGTATTATCAGCCTGTGTTCAGAAATCTACTGCCTTAACCCAGCACAGGGGAAAACCCATAGAACAACCAGAAACCCTGGACCCACTTTTCACGGATCCAGACTTGGCACATGGAACTTATACAGGAAGCTGTGGTCATGTAATGCATGCAGTGTGCTGGCAGAAGTACTTTGAAGCTGTGCAACTGAGCTCTCAGCAGCGTGTCCACGTGGACCTGTTTGACTTGGAGAGTGGGGAGTACCTCTGCCCTCTGTGCAAGTCTCTGTGCAACACTGTGATCCCCATTATCCCTCTGCAACCACAAAAGATAAACAGTGAGAATGCAGAAGCTCTTGCTCAACTTTTAACCCTGGCACGGTGGATACAGACTGTTCTGGCCAGAATATCAGGTTATAATATGAAACATGCTAAAGGAGATAACCCAGTAATTCCTACGTTGTTTGATCAAGGGATGGGAGATTCTACTTTGGAGTTTCATTCTATCCTGAGTTTTGGAGTTCAGTCTCTGATCAAGTATTCTAATAGTATCAAGGAAATGGTCATTCTCTTTGCCACAACAGTGTATAGAATTGGACTGAAAGTGCCTCCTGATGAAATGGATCCTCGAGTCCCCATGATGACCTGGAGCACGTGTGCTTTCACTGTCCAGGCAATTGAAAACCTCTTGGGAGATGAAGGAAAACCTCTTTTTGGAGCTCTTCAAAATAGGCAGCACAATGGTCTGAAAGCATTAATGCAGTATGCAGTTGCACAGAGGGTTACCTGTTCTCAGGTCCTGATACAGAAACATCTGGTTCGTCTTCTATCAGGTAGAGTCTTTTCTGAATTATACGCCAATAACAGTGCCCACTGCTGTCTGTGCTGGACACTGTGCTCTGATCTTATTGTACAATCGCATTTCCTCGAGTCCTCATTATTCCTGTTCATCCCCACTTCTGATGCCAGATGGGAGGCCCAGGGAATTGTGCTTCCGAACCTAAGATCAGAAGATACACCATGCCTTCTATCTATAGATCTATTTCATGTTTTGGTAGGTGCTGTGCTGGCATTCCCAGCTTTGTATTGGGATGACACTGTTGATCTGCAGCCTTCATCAATTAGTTCTGCCTATAACCAGCTTTATCTATTCCATCTGATCACCATGGCACACATGCTTCAGATATTTCTTACAATAGACACAGGACTCCCTGTTTCTCAGGTTGAAGAAGATAGTGAGGAGGCTCGTTCTGCATCATCTTTCTTTGCAGAAATTTCCCAGTATATGGGCAGCTGTACTGGGTGCAGTGCCCCCGGCTGGTACCTATGGGCTTCCCTAAAAAGCGGCATCACCCCATACCTTCGCTGTGCTGCCTTGTTCTTTCACTACGTACTTGGGGTGACTCCACCTGAGGAGCTGTTCACAACCAATTCTGCCGAGAGAGAGTACAGTACACTATGTAGCTATCTATCTTTACCCACAAATTTGTTCCTGCTCTTCCAGGAATACTGGGATACTGTAAAGCCCTTGCTCCAGAGGTACTACAGGAGTAAAATGTCATTGTTGGGTTACTATCCAAGGAACATGCAGAGAAGGAAGAGAAAGAACTGGAGAGAGCAGCTCATTGATGAGCATTGTGCTGGCCCTGTGATAATTCAATGCTTTATCCCTACATGCAGGTGGTGTACAGATCCTGACTTATTGAACTGCCTAAAGCAGAAAAGCACCGTGGTGAGATATCCTAGAAAAAGAAATAGTTTGATAGAGCTTCCTGATGACTACAGCTGCCTCCTGAATCAGGCTTCTCATTTCAGATGTCCACGATCTGCAGACGATGAGCGCAAGCATCCTGTCCTTTGTCTTTTTTGTGGGGCCATCCTGTGTTCTCAGAACATCTGCTGCCAAGAAATCGTGAACGGGGAAGAGGTCGGAGCTTGTATTTTCCATGCACTTCACTGTGGAGCGGGAGTCTGCATTTTCCTCAAAATCAGAGAATGCAGAGTGGTCCTGGTTGAAGGAAAAGCCAGAGGCTGTGCCTATCCAGCTCCTTACTTGGATGAATATGGAGAAACTGACCCTGGGCTGAAGAGGGGTAACCCTCTTCATTTATCTCGTGAGCGGTATCGGAAGCTCCACTTGGTCTGGCAACAGCACTGCATTATAGAAGAGATTGCTAGGAGCCAGGAAACTAATCAGATGTTATTTGGATTCAACTGGCAATTATTGTGA

Related Sequences

XP_004861798.1 Protein

Ubr1 PREDICTED: E3 ubiquitin-protein ligase UBR1 [Heterocephalus glaber]

Length: 1797 aa      View alignments
>XP_004861798.1
MDPDLEKQEENVQLSIFSPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPTCVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDMEAWKTGPFCMNHEPGRASTTKENSHCPLNEEVIAQARKIFPSVIKYIVELTIWEEEKQLPHELRIREKNERYYCVLFNDEHHSYDHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGTYAACQEAKEDIKSHSENVSQHPLHVEVLHSEVMAHQKFALRLGSWMNKIMSYSSDFRQIFCHECLREEPGSENPCLISRLMLWDAKLYKGARKILHELIFSSFFMEMEYKKLFAVEFVKYYKQLQKEYISDDHDRSISITALSVQMFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLKYILISKPTIWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQMQLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTSFMTGSKTAIQLCGHTLETRSYRVSEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVPFEDLKVEVLVEYPLRCLVLVAQVVAEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLILQRYELADAFTKTISTKDQDLIKQYNTLIEEMLQVLIYVVGERYVPGVGSVTKEEVIMREIVHLLCIEPMPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSKTQHSKAEHMQKKRRKQDNKDEALPPPPPPEFCPAFSKVVNLLSCDIMMYILRTIFERAVDTDSNLWTEGMLQMAFHILALGLLEEKQQLQKAPEEEVTFDFYHKASRLGSSAMNAQNIQMLLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGLESIKNDEIIHDKEKAERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDTTSEMPGKEDSIMEEDSTPAVSDYCKIALGPKRGPTVTEKEVLTCILCQEEQEVKIENNPMVLSACVQKSTALTQHRGKPIEQPETLDPLFTDPDLAHGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRVHVDLFDLESGEYLCPLCKSLCNTVIPIIPLQPQKINSENAEALAQLLTLARWIQTVLARISGYNMKHAKGDNPVIPTLFDQGMGDSTLEFHSILSFGVQSLIKYSNSIKEMVILFATTVYRIGLKVPPDEMDPRVPMMTWSTCAFTVQAIENLLGDEGKPLFGALQNRQHNGLKALMQYAVAQRVTCSQVLIQKHLVRLLSGRVFSELYANNSAHCCLCWTLCSDLIVQSHFLESSLFLFIPTSDARWEAQGIVLPNLRSEDTPCLLSIDLFHVLVGAVLAFPALYWDDTVDLQPSSISSAYNQLYLFHLITMAHMLQIFLTIDTGLPVSQVEEDSEEARSASSFFAEISQYMGSCTGCSAPGWYLWASLKSGITPYLRCAALFFHYVLGVTPPEELFTTNSAEREYSTLCSYLSLPTNLFLLFQEYWDTVKPLLQRYYRSKMSLLGYYPRNMQRRKRKNWREQLIDEHCAGPVIIQCFIPTCRWCTDPDLLNCLKQKSTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRSADDERKHPVLCLFCGAILCSQNICCQEIVNGEEVGACIFHALHCGAGVCIFLKIRECRVVLVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQETNQMLFGFNWQLL