Details from NCBI annotation

Gene Symbol Patl2
Gene Name protein associated with topoisomerase II homolog 2 (yeast)
Entrez Gene ID 101702143

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PATL2 ENSCPOG00000002922 (Guinea pig)

Gene Details

protein associated with topoisomerase II homolog 2 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002654, Guinea pig)

Protein Percentage 65.13%
CDS Percentage 74.16%
Ka/Ks Ratio 0.53769 (Ka = 0.2807, Ks = 0.5221)

PATL2 ENSG00000229474 (Human)

Gene Details

protein associated with topoisomerase II homolog 2 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSP00000416673, Human)

Protein Percentage 58.94%
CDS Percentage 68.25%
Ka/Ks Ratio 0.42532 (Ka = 0.3542, Ks = 0.8327)

Patl2 ENSMUSG00000027233 (Mouse)

Gene Details

protein associated with topoisomerase II homolog 2 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028665, Mouse)

Protein Percentage 53.78%
CDS Percentage 66.48%
Ka/Ks Ratio 0.46389 (Ka = 0.3924, Ks = 0.8459)

Patl2 ENSRNOG00000017061 (Rat)

Gene Details

protein associated with topoisomerase II homolog 2 (yeast)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022964, Rat)

Protein Percentage 57.63%
CDS Percentage 67.04%
Ka/Ks Ratio 0.4365 (Ka = 0.3762, Ks = 0.8619)

Genome Location

Sequence Coding sequence

Length: 1161 bp    Location: 11558021..11565385   Strand: +
>XM_004861720.1
ATGGCTACCCTAAGCAGGAAGAACAGCAACAGTCAAGCGCTTTACCTTCCAGAGGCTGACAATGCTTTCTCAGTGGAGGACACAGCCTTAGAGGAAGACTGCCAGCCTACCAAGATGAAATGTCTCGAAGGCCCACATTTACACCAAAGGCCAGGCAGGCTGTGTGGCCCCATGATTCCTAAGGCAGAAGAGAAAAACAAAGTGGCAGAGGAGGAGGATTTAGATCCATATTTGGTCACAGACCCTGATGAAGAAGAGAATGATCTTGGGGATCCAGCTGCACTCGATGCCACTCATTACATGCAGCCTGCATTTCCCAACACCAGCTCTCCAGCTCGGCATTTTGGACCTCAACAGCCCCTGCTAGACTCATCTCTCTTCTGCAATTCACTGCCCTCATGGCCTTCTAGGCTCAGGAAGCCCTTGGATGTCCATTGGAATTTACCTGGAGGGCCAGGGGAGCAGAGCTTCCTTCCTCCCAGCTCAAGATTATTTTTCAGTCATCTGACCCAGCTCCACCCTCAGCACCAAAGGATCCTGCAGCAGCAACAGAGTCAAACACCAAGTTCCTCAGCCAAGAAGACTTGGTTTCAGCAGCCAGACCCTTATGCTAACCTCATGACCCGAAAAGAGAAGGATTGGGTGACAAAAGTGCTGATGGCTCAGCTGCAGAGCAAGAACCCCCATCTGGAAGATTATTACTATCAGAAATATTATGAGAAGCTAGAGAAGAAGGCAGACGAAGAAAAACATGGACAAAGGAACAGGGTTCAGTCTCCTAAGTTGGTGACACCTTATGTTCAGAAGGCAGAGGCTTATGAATCAGTGGTTCGTATTGAAGGTTCCCTGGGCCAGGTAGCTGTATCAACATGTTTTAGTCCTCGCCGAGCTATTGATGCTGTATCTCATGGAACTCAAGAGCAGGATCCAGCAGCGGCAAGCAGTCAGAAGCTTCGGGTATTATGCAAGATTGAGAGGATGTTCCTTCCGTTACTAGAGATAGAGGAGGGCCAGAAGGATGGGCTTCCACAGCCCTGCCCCTTTGGGCAGCAGGACAACCAGGTTGAGAAGCTCTTCCAAGCCTTAAAGGCCCAGGAGCAGAACAACCTAGAGCCCTACATATGTTATTCAAGCCTCTGGGAAAATACATCAGTCATTTGA

Related Sequences

XP_004861777.1 Protein

Patl2 PREDICTED: protein PAT1 homolog 2 [Heterocephalus glaber]

Length: 386 aa      View alignments
>XP_004861777.1
MATLSRKNSNSQALYLPEADNAFSVEDTALEEDCQPTKMKCLEGPHLHQRPGRLCGPMIPKAEEKNKVAEEEDLDPYLVTDPDEEENDLGDPAALDATHYMQPAFPNTSSPARHFGPQQPLLDSSLFCNSLPSWPSRLRKPLDVHWNLPGGPGEQSFLPPSSRLFFSHLTQLHPQHQRILQQQQSQTPSSSAKKTWFQQPDPYANLMTRKEKDWVTKVLMAQLQSKNPHLEDYYYQKYYEKLEKKADEEKHGQRNRVQSPKLVTPYVQKAEAYESVVRIEGSLGQVAVSTCFSPRRAIDAVSHGTQEQDPAAASSQKLRVLCKIERMFLPLLEIEEGQKDGLPQPCPFGQQDNQVEKLFQALKAQEQNNLEPYICYSSLWENTSVI