Details from NCBI annotation

Gene Symbol Capn3
Gene Name calpain 3, (p94), transcript variant X10
Entrez Gene ID 101707543

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN3 ENSCPOG00000027144 (Guinea pig)

Gene Details

calpain 3, (p94)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016877, Guinea pig)

Protein Percentage 91.37%
CDS Percentage 89.3%
Ka/Ks Ratio 0.11601 (Ka = 0.0516, Ks = 0.4449)

CAPN3 ENSG00000092529 (Human)

Gene Details

calpain 3, (p94)

External Links

Gene Match (Ensembl Protein ID: ENSP00000380349, Human)

Protein Percentage 92.46%
CDS Percentage 90.03%
Ka/Ks Ratio 0.07354 (Ka = 0.0338, Ks = 0.4601)

Capn3 ENSMUSG00000079110 (Mouse)

Gene Details

calpain 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028749, Mouse)

Protein Percentage 95.06%
CDS Percentage 89.89%
Ka/Ks Ratio 0.04045 (Ka = 0.0219, Ks = 0.5404)

Capn3 ENSRNOG00000008609 (Rat)

Gene Details

calpain 3 (Capn3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011761, Rat)

Protein Percentage 95.34%
CDS Percentage 89.85%
Ka/Ks Ratio 0.03872 (Ka = 0.0212, Ks = 0.5478)

Genome Location

Sequence Coding sequence

Length: 2190 bp    Location: 9472642..9512636   Strand: +
>XM_004861650.1
ATGCCGACTGTGATTAGTGCGTCTGTGGCCCCTCGGACAGGGGCTGAGCCCAGGTCTCCAGGGCCAGTCCCTCACCCAGCCCAGGGAAAGGCCACCGAAGCAGGGGGTGGACACCCAGGCAGCATCTATTCAGCCATCATCAGCCGCAACTTTCCTATCATTGGAGTGAAAGAAAAGACATTTGAGCAGCTTCACAAGGAATGTCTAGAAAAGAAAGTTCTTTATCTGGACCCTGAGTTCCCACCGGATGAGACCTCTCTTTTTTACAGCCAGAAGTTCCCCATCCAGTTCATCTGGAAGCGCCCTCTGGAAATCTGTGAGAATCCCCGATTTATCATTGGTGGAGCCAATAGGACTGACATTTGCCAAGGAGACCTAGGGGACTGCTGGTTTCTCGCAGCCATCGCCTGTCTGACCTTGAATGAGCGGCTACTTTTCCGAGTTATCCCGCATGACCAAAGTTTCACTGAAAACTATGCAGGGATCTTCCACTTCCAGTTCTGGCGCTATGGAGACTGGGTGGATGTGGTCATTGATGACTGTCTGCCAACATACAACAACCAGCTGGTCTTCACCAAATCCAACCACCTCAATGAGTTCTGGAGCGCTCTGCTGGAGAAGGCTTATGCTAAGCTCCACGGTTCCTATGAAGCCTTGAAAGGTGGGAACACCACTGAGGCCATGGAGGACTTCACCGGAGGGGTGACGGAGTACTTCGAGATCAAGGATGCTCCCCGAGACATGTACAGGATCATGAGGAAAGCCATCGAGAGAGGCTCCCTCATGGGCTGCTCCATCGATACGATTGTTCCCGTTCAGTATGAGACAAGAATGGCCTGTGGGCTGGTCAAAGGTCATGCCTATTCTGTCACTGGACTGGAGGAGGCCCTGTTCAAAGGCCAGAGAGTGAAGCTGGTGCGGCTACGGAACCCCTGGGGCCAGGTGGAGTGGAGCGGCTCCTGGAGTGACAGCTGGAAGGACTGGAGCTTTGTGGACAAAGATGAAAAGGCCCGTCTGCAGCACCAGGTCACTGAGGATGGAGAGTTCTGGATGTCGTATGACGACTTCATCTCCCACTTCACAAAGCTGGAGATCTGCAACCTGACTGCTGATGCCCTGGAGTCCGACAAGCTGCAGACGTGGACGGTGTCAGTGAACGAGGGCCGCTGGGTGAGGGGGTGCTCTGCCGGAGGCTGCCGAAACTTCCCAGACACTTTCTGGACCAACCCACAGTACCGCCTGAAGCTCCTGGAGGAGGATGATGACCCTGACGACTCTGAGGTCATCTGCAGCTTCCTGGTGGCACTGATGCAGAAGAACCGGCGGAAGGATCGGAAGCTGGGCGCCAACCTCTTCACCATTGGTTTTGCCATCTATGAGGTTCCCAAAGAGATGCACGGGAACAAGCAGCACCTGCAGAAGGACTTCTTCCTGTACAACGCCTCCAGGGCCAGGAGCAAAACCTACATCAACATGCGAGAGGTGTCCCAGCGCTTCCGCCTGCCTCCCAGCGAGTACGTCATCGTGCCCTCCACCTACGAGCCCCACCAGGAAGGGGAGTTCATCCTCCGTGTCTTCTCTGAGAAGAGGAATCTCTCAGAGGAAGTTGAAAATACAATCTCTGTGGATCGACCTGTGCCACGGCCTGGCAACACTGACCAGGAAAGCGAGGAGGAGCACCGATTCCACGACATTTTCAAGCAGATAGCAGGTGACGACATGGAGATCTGTGCAGATGAACTCAAGAACGTCCTCAACGCGGTTGTGAACAAACACAAGGATCTGAAGACACAAGGGTTCACGCTGGAGTCCTGCCGCAGCATGATTGCCCTCATGGATACAGATGGCTCTGGGAGGCTGAACCTGCAAGAGTTCCATCATCTCTGGAAGAAGATCAAGGCATGGCAGAAAATCTTCAAACACTATGACACAGACCAATCCGGCACCATCAACAGCCACGAGATGCGCAATGCAGTGAACGATGCAGGCTTCCACCTCAACAGCCAGCTCTACAACATCATCACCATGCGGTACGCAGACAGACACATGAACATAGATTTCGACAGCTTCATCTGCTGCTTCGTCAGGCTGGAGGGCATGTTCCGAGCTTTTAATGCATTTGACAAGGATGGAGATGGTATCATCAAACTCAGCGTTCTAGAGTGGCTGCAGCTCACCATGTATGCCTGA

Related Sequences

XP_004861707.1 Protein

Capn3 PREDICTED: calpain-3 isoform X10 [Heterocephalus glaber]

Length: 729 aa      View alignments
>XP_004861707.1
MPTVISASVAPRTGAEPRSPGPVPHPAQGKATEAGGGHPGSIYSAIISRNFPIIGVKEKTFEQLHKECLEKKVLYLDPEFPPDETSLFYSQKFPIQFIWKRPLEICENPRFIIGGANRTDICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDDCLPTYNNQLVFTKSNHLNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEYFEIKDAPRDMYRIMRKAIERGSLMGCSIDTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGQRVKLVRLRNPWGQVEWSGSWSDSWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFISHFTKLEICNLTADALESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSFLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASRARSKTYINMREVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVPRPGNTDQESEEEHRFHDIFKQIAGDDMEICADELKNVLNAVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHLWKKIKAWQKIFKHYDTDQSGTINSHEMRNAVNDAGFHLNSQLYNIITMRYADRHMNIDFDSFICCFVRLEGMFRAFNAFDKDGDGIIKLSVLEWLQLTMYA