Sequence details NCBI ID: XM_004861590.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Chac1
Gene Name ChaC, cation transport regulator homolog 1 (E. coli), transcript variant X1
Entrez Gene ID 101721673

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHAC1 ENSCPOG00000007947 (Guinea pig)

Gene Details

ChaC, cation transport regulator homolog 1 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007153, Guinea pig)

Protein Percentage 92.34%
CDS Percentage 91.14%
Ka/Ks Ratio 0.13182 (Ka = 0.0402, Ks = 0.3053)

CHAC1 ENSG00000128965 (Human)

Gene Details

ChaC, cation transport regulator homolog 1 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSP00000398105, Human)

Protein Percentage 89.19%
CDS Percentage 86.49%
Ka/Ks Ratio 0.08527 (Ka = 0.0547, Ks = 0.6409)

Chac1 ENSMUSG00000027313 (Mouse)

Gene Details

ChaC, cation transport regulator 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028780, Mouse)

Protein Percentage 88.74%
CDS Percentage 84.38%
Ka/Ks Ratio 0.08668 (Ka = 0.0623, Ks = 0.719)

Chac1 ENSRNOG00000014387 (Rat)

Gene Details

ChaC, cation transport regulator homolog 1 (E. coli) (Chac1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000019392, Rat)

Protein Percentage 88.74%
CDS Percentage 84.23%
Ka/Ks Ratio 0.08711 (Ka = 0.0648, Ks = 0.7435)

Genome Location

Sequence Coding sequence

Length: 669 bp    Location: 8201323..8203687   Strand: +
Raw sequence   
>XM_004861590.1
ATGAAGCAGGAGGCCGCGGTCCAGAACACTCCGCCTCCCTCGCCGTTCCCGGCATCGTCAGTGCAGACCCCCCAGGAGGACGGCGAACCCCAAGCACTGTGGATTTTCGGATACGGCTCCCTGGTGTGGAGGCCCGACTTTGCCTACAGCGACAGCCGCGTGGGCTTCGTGCGCGGCTACAGCCGGCGCTTCTGGCAGGGTGACACCTTCCATCGGGGCAGTGACAAAATGCCTGGCCGTGTGGTGACTCTCCTTGAAGATCGTGAGGGCTGCACTTGGGGTGTGGCATACCAGGTTCAAGGCGAGCAAGTGAATGAGGCCCTGAAGTACCTGAATGTTCGGGAGGCAGTGCTTGGCGGCTATGACACCAAGGAGGTGACCTTCTACCCTCAGGATACACCAGAGCAGCCCCTCAAGGCACTGGCCTATGTAGCCACCCCACAGAACCCTGGCTACTTGGGCCCTGCTCCGGAGGAGGCCATTGCTACCCAGATCCTGGCCTGCCGGGGCTTCTCTGGCCACAACCTCGAGTACTTGCTGCGACTTGCTGACTTCATGCAGCTCTGTGGGCCTCAGGCGCAGGATGAGCATCTGGAAGCCATTGTGGATGCGGTGGGCTCCATGATGCCCTGTTTCTGCCCCATCGAGCAGTCTCTGGCACTGATCTGA

Related Sequences

XP_004861647.1 Protein

Chac1 PREDICTED: cation transport regulator-like protein 1 isoform X1 [Heterocephalus glaber]

Length: 222 aa      View alignments
>XP_004861647.1
MKQEAAVQNTPPPSPFPASSVQTPQEDGEPQALWIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDREGCTWGVAYQVQGEQVNEALKYLNVREAVLGGYDTKEVTFYPQDTPEQPLKALAYVATPQNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFMQLCGPQAQDEHLEAIVDAVGSMMPCFCPIEQSLALI