Details from NCBI annotation

Gene Symbol Rpusd2
Gene Name RNA pseudouridylate synthase domain containing 2, transcript variant X1
Entrez Gene ID 101714115

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPUSD2 ENSCPOG00000013201 (Guinea pig)

Gene Details

RNA pseudouridylate synthase domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011884, Guinea pig)

Protein Percentage 86.24%
CDS Percentage 88.62%
Ka/Ks Ratio 0.32347 (Ka = 0.0821, Ks = 0.2539)

RPUSD2 ENSG00000166133 (Human)

Gene Details

RNA pseudouridylate synthase domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000323288, Human)

Protein Percentage 82.02%
CDS Percentage 84.95%
Ka/Ks Ratio 0.26803 (Ka = 0.1065, Ks = 0.3972)

Rpusd2 ENSMUSG00000027324 (Mouse)

Gene Details

RNA pseudouridylate synthase domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028796, Mouse)

Protein Percentage 80.56%
CDS Percentage 82.53%
Ka/Ks Ratio 0.21091 (Ka = 0.1136, Ks = 0.5386)

Genome Location

Sequence Coding sequence

Length: 1638 bp    Location: 7867102..7870985   Strand: +
>XM_004861567.1
ATGCGCCTGGGTGCCCACGGCCGTCTGGGGTTTCTTGTACGGTGGTGTTTCGACCCCCGGCCCCTCAGGTTTGTCAGGACTTTGGGTAGCTGTAGGAGCCCGATGGCAGAAACACTGTCGACAGGAGTCGAGACAGCGGGCGGCCTGAGGGCTCCGGCTCAGCAAAACGGAGACGGTGGTAGCGATGCGAGGGGCGAGCCGCTACTGGGGCCCCCGGAACCAGCGGGCCCTGTAACCGAACCGACGCTCAGGACCGGGGAGCAGTCGTCGACTCCAGCCGCCGACCCAGGCAAGCGGAAGAAGCGGCGAGGCGCAACTGGGGAGCGCGTCGTCCCACCCCCGAAGAAGCGGCGAACTGGAGTCAGCTTTGGTAATGAGCACTTCGCCGAAACCAGTTACTACTTTGAGGGCGGCCTGCGCAAGGTGCGACCCTATTACTTCGACTTTCAGACCTACTGCAAAGGCCGCTGGGTGGGCCACAGTTTGCTGCACGTCTTTAGCACTGAGTTCCGAGCCCAGCCGCTGGCCTACTACGAGGCGGCGGTACAGGCGGGCCGCCTGCACCTCAACGAGGAGCCAGTGCAGGACCTCAGCGTCACGCTCAAGGACAATGACTTCTTGAGGAACACAGTGCACAGGCATGAGCCACCAGTCACAGCAGAGCCTATTCGCCTGCTAGCTGAGAATGAAGATGTGGTAGTTGTAGATAAGCCTTCCTCTATTCCTGTCCACCCCTGTGGTCGTTTCCGACACAACACAGTCATCTTCATCCTAGGCAAGGAACACCAACTGAAGGAGCTACGCCCATTGCATCGGCTTGACCGCCTAACCTCAGGGGTGCTCATGTTTGCCAAGACAGCTGCTGTCTCTGAGAGAATCCATGAGCAAGTTCGGAACCGGCAGCTGGAGAAAGAGTACGTGTGCCGAGTAGAAGGGGAGTTCCCCAACAATGAGGTGACCTGCAAGGAACCCATCCTAGTGGTATCTTACAAGGTAGGAGTGTGCCGGGTAGATCCTCGGGGTAAGCCCTGTGAGACCCTGTTCCAGAGATTGAGCTACAATGCCCACTCCAGTGTGGTACGGTGCCGGCCACTCACAGGCCGGACCCACCAGATTCGAGTTCACCTCCAGTTCCTGGGCCACCCCATTATCAATGACCCCATCTACAATTCACTTGCCTGGGGCCCTTCCCGAGGCCGAGGTGGCCACATTCCCAAGACAGATGAGGAGTTGCTTCGGGACCTGGTGACAGAACACCAGACCAAACAGAGCCTGGATGTGCTGGATCTCTGTGAGAGTGACCTGTCCCCAAGATTCCCAGACTCTACAGCTGCCTCCTCAGAGTTGGCCAAGGCCAACCTGGAAGAATTGATTACAGCTGCTCAGAAGATGGATGGAGTAGTTGAGGCACCCCCTCAGGATCTGGACACAATGATCTTGGTGCCTGAGGAGGCAGCTGAAACAGACGTTACGAATCAAGAGACAGACCCTCTCTGTACAGAGTGCCGGCTGGTGCGACAGGATCCCTTGCCCCAAGACCTTGTGATGTTCCTGCATGCCCTCCGCTATAAAGGGCCAGACTTTGAGTATGTTTCACCCATGCCTGCCTGGGCACAGGATGACTGGCAAGGGGACTGA

Related Sequences

XP_004861624.1 Protein

Rpusd2 PREDICTED: RNA pseudouridylate synthase domain-containing protein 2 isoform X1 [Heterocephalus glaber]

Length: 545 aa     
>XP_004861624.1
MRLGAHGRLGFLVRWCFDPRPLRFVRTLGSCRSPMAETLSTGVETAGGLRAPAQQNGDGGSDARGEPLLGPPEPAGPVTEPTLRTGEQSSTPAADPGKRKKRRGATGERVVPPPKKRRTGVSFGNEHFAETSYYFEGGLRKVRPYYFDFQTYCKGRWVGHSLLHVFSTEFRAQPLAYYEAAVQAGRLHLNEEPVQDLSVTLKDNDFLRNTVHRHEPPVTAEPIRLLAENEDVVVVDKPSSIPVHPCGRFRHNTVIFILGKEHQLKELRPLHRLDRLTSGVLMFAKTAAVSERIHEQVRNRQLEKEYVCRVEGEFPNNEVTCKEPILVVSYKVGVCRVDPRGKPCETLFQRLSYNAHSSVVRCRPLTGRTHQIRVHLQFLGHPIINDPIYNSLAWGPSRGRGGHIPKTDEELLRDLVTEHQTKQSLDVLDLCESDLSPRFPDSTAASSELAKANLEELITAAQKMDGVVEAPPQDLDTMILVPEEAAETDVTNQETDPLCTECRLVRQDPLPQDLVMFLHALRYKGPDFEYVSPMPAWAQDDWQGD