Details from NCBI annotation

Gene Symbol Thbs1
Gene Name thrombospondin 1
Entrez Gene ID 101701581

Database interlinks

Part of NW_004624804.1 (Scaffold)

For more information consult the page for NW_004624804.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

THBS1 ENSCPOG00000014779 (Guinea pig)

Gene Details

thrombospondin 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013317, Guinea pig)

Protein Percentage 94.36%
CDS Percentage 90.69%
Ka/Ks Ratio 0.08767 (Ka = 0.0337, Ks = 0.3839)

THBS1 ENSG00000137801 (Human)

Gene Details

thrombospondin 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000260356, Human)

Protein Percentage 94.79%
CDS Percentage 90.6%
Ka/Ks Ratio 0.0548 (Ka = 0.0243, Ks = 0.4438)

Thbs1 ENSMUSG00000040152 (Mouse)

Gene Details

thrombospondin 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044903, Mouse)

Protein Percentage 93.42%
CDS Percentage 88.04%
Ka/Ks Ratio 0.05 (Ka = 0.0318, Ks = 0.6364)

Thbs1 ENSRNOG00000045829 (Rat)

Gene Details

thrombospondin 1 (Thbs1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066041, Rat)

Protein Percentage 96.33%
CDS Percentage 89.38%
Ka/Ks Ratio 0.02541 (Ka = 0.0165, Ks = 0.65)

Genome Location

Sequence Coding sequence

Length: 3516 bp    Location: 6849670..6865709   Strand: +
>XM_004861528.1
ATGAGGCTGGCCTGGGGACTCAGTGTCCTGTTCCTAGTGCACGTGTGTGGCAGCAACCGGATTCCAGAGTCTGGGGGAGACAGCAGCGTGTTTGACATCTTTGAACTCACGGGGGCTGCCCGAAAAGGTTCTGGGCGCCGGCTAGTGAAGGGTCCTGACCCGTCCAGCCCAGCTTTCCGCATTGAGAATGCCAACCTGATCCCACCTGTGCCTGACGACAAGTTCCAAGACCTAGTCGACGCTGTGCGGGCAGAGAAAGGCTTCCTCCTCCTGGCCTCCCTGAGGCAGCTGAAGAAGACCCGAGGCACATTGCTGGCGGTGGAGCGGAAAGACCACTCTGGCCAGATCTTCAGCGTGGTCTCCAACGGCAAGGCTGGAACCCTGGACCTGAGCCTGAGCGTGCAGGGCAAGCAGCAGGTGGTGTCAGTGGAGGAAGCTCTCCTGGCCACTGGCCAGTGGAAGAGCATCACCCTGTTTGTGCAGGAAGACAGGGCCCAGCTGTACATCGACTGTGAAAAGATGGAGAACGCTGAGCTGGATGTCCCCATCCAGAGCATCTTCTCCAGGGACCTGGCCAGTATTGCCAGGCTGCGTGTCGCAAAGGGAGATGTCAATGACAATTTCCAGGGGGTGCTGCAGAATGTGCGGTTTGTCTTTGGAACCACACCTGAAGACATCCTCAGGAACAAAGGCTGCTCCAGCTCTGCTACCAATGTCCTTCTCACCCTGGACAACACCGTGGTGAATGGTTCCAGCCCTGCCATCCGCACTAACTACATTGGCCACAAGACAAAGGACCTGCAGGCCATCTGTGGCATCTCCTGTGATGAGCTGTCCAGCATGGTCCTGGAGCTCCGGCGCCTGCACACTGTCGTGACCACGCTGCAGGACAGCATCCGAAAAGTGATGGAAGAGAACAGACAATTGGTCGAGGAGGTGAGGAGACCTCCCCTCTGCTATCACAATGGAGTTCAGCACGGAAATAATGAGAGGTGGACTGTGGATAGCTGCACCCAGTGTCACTGTCAGAACTCAGTTACCATCTGCAAGAAGGTGTCCTGCCCCATCATGCCCTGCTCCAACGCCACAGTTCCTGACGGAGAGTGCTGCCCACGGTGCTGGCCCAGTGACTCTGCAGATGATGGCTGGTCACCCTGGTCTGAGTGGACTTCCTGCTCTGCAACGTGTGGCAGTGGGATTCAGCAGCGTGGGCGGTCTTGTGACAGCCTCAACAACCGATGTGAAGGCTCCTCTGTGCAGACGAGGACCTGCCACATTCAGGAGTGCGACAAGAGATTTAAACAGGATGGTGGCTGGAGCCACTGGTCCCCATGGTCATCTTGCTCTGTGACATGTGGAGATGGTGTGATCACCAGGATCCGGCTCTGCAACTCCCCCAGCCCCCAGATGGATGGGAAACCGTGTGAAGGCGAAGCCCGAGAGACCAAGGCCTGCAGGAGAGACCCCTGCCCCATCAGTGGAGGCTGGGGGCCCTGGTCACTGTGGGACATCTGCTCCGTCACTTGTGGAGGAGGACTGCAGACACGTAGCCGGCTCTGCAACAACCCTGCACCGCAGTTTGGAGGCAAAGACTGCATTGGTGATGTGACAGAAAGCCAAGTCTGCAACAAGCAGGACTGTCCAATTGATGGATGCCTGTCCAACCCTTGCTTTGCCGGGGCCAAGTGTACCAGCTATCCCGATGGCAGCTGGAAATGTGGTGCTTGTCCTGCTGGTTACAGTGGAAATGGCATCCAGTGCAAAGATGTTGATGAGTGCAGAGAAGTGCCCGATGCCTGCTTTAACCACAACGGAGAACACAGGTGCAAAAACACAGACCCTGGGTACAACTGCCTGCCCTGCCCACCGCGTTTCACAGGCACACAGCCCTATGGCCAGGGTGTCCAACATGCCACAGCCAACAAACAGGTGTGCAAGCCCCGCAACCCCTGCACTGATGGGACACACAACTGCAACAAGAATGCCAAGTGCAACTACCTGGGCCACTACAGCGACCCCATGTACCGCTGCGAGTGTAAGCCTGGCTATGCTGGCAATGGCATTATCTGCGGGGAGGACACAGACTTGGATGGCTGGCCCAACGAGGACCTGGTGTGTGTGGCCAATGCAACCTACCACTGCAAAAAGGACAATTGTCCCAACCTCCCCAATTCAGGGCAGGAAGACTATGACAAGGATGGAATCGGTGATGCCTGTGATGAGGATGACGACAACGATAAAATTCCAGACGATAGGGACAATTGTCCGTTCCATTACAACCCAGCTCAGTACGACTACGACAGAGATGATGTGGGAGACCGTTGTGACAACTGCCCCTACAACCACAACCCAGATCAGGCGGACACAGACAACAATGGGGAAGGAGATGCCTGTGCCGCAGACATCGACGGAGACGGCATCCTCAATGAACGGGACAACTGTCAGTATGTCTACAATGTGGACCAGAGGGACACAGATATGGATGGGGTTGGGGATCAGTGTGACAACTGCCCCCTGGAGCACAACCCAGATCAGCTGGACTCTGACTCAGACCGCATTGGGGACACTTGTGACAACAATCAGGACATTGATGAAGATGGCCACCAGAACAATCTGGACAATTGTCCCTATGTCCCCAATGCCAACCAGGCTGACCACGATAAAGATGGCAAGGGAGATGCCTGTGACCATGATGATGACAACGATGGCATTCCCGATGACAGGGACAACTGCAGGCTGGTGCCCAATCCCGACCAGAAGGACTCCGATGGTGATGGTCGAGGTGATGCCTGCAAAGATGACTTTGATCATGACAGTGTGCCAGACATTGATGACATCTGTCCTGAGAATGTTGACATCAGTGAGACTGATTTCCGCCGTTTCCAGATGATTCCTCTAGATCCCAAAGGAACATCACAAAATGACCCTAACTGGGTTGTACGCCATCAGGGCAAAGAACTTGTCCAGACTGTCAACTGTGATCCTGGACTTGCTATAGGTTTTGATGAGTTTAATGCTGTGGACTTCAGTGGCACCTTCTTCATCAACACTGAAAGGGATGATGACTACGCCGGTTTTGTGTTCGGATACCAGTCCAGCAGCCGCTTCTACGTCGTCATGTGGAAGCAAGTCACTCAGTCCTACTGGGACACCAACCCCACCAGAGCCCAGGGTTACTCTGGCCTTTCTGTGAAAGTCGTGAACTCCACCACGGGACCCGGCGAGCACCTGCGTAATGCCCTGTGGCACACAGGCAACACCCCCGGCCAGGTGCGCACCCTGTGGCATGACCCTCGTCACATAGGCTGGAAAGATTTCACCGCCTACAGATGGCGTCTCAGCCACAGGCCGAAGACAGGTTTCATCAGAGTGGTGATGTATGAAGGGAAGAAAATCATGGCGGACTCAGGACCCATCTATGATAAAACCTATGCTGGTGGGAGACTAGGATTATTTGTCTTCTCTCAAGAAATGGTGTTCTTCTCTGACCTGAAATATGAATGCAGAGATTCCTAA

Related Sequences

XP_004861585.1 Protein

Thbs1 PREDICTED: thrombospondin-1 [Heterocephalus glaber]

Length: 1171 aa      View alignments
>XP_004861585.1
MRLAWGLSVLFLVHVCGSNRIPESGGDSSVFDIFELTGAARKGSGRRLVKGPDPSSPAFRIENANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQLKKTRGTLLAVERKDHSGQIFSVVSNGKAGTLDLSLSVQGKQQVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELDVPIQSIFSRDLASIARLRVAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSATNVLLTLDNTVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRRLHTVVTTLQDSIRKVMEENRQLVEEVRRPPLCYHNGVQHGNNERWTVDSCTQCHCQNSVTICKKVSCPIMPCSNATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGSGIQQRGRSCDSLNNRCEGSSVQTRTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMDGKPCEGEARETKACRRDPCPISGGWGPWSLWDICSVTCGGGLQTRSRLCNNPAPQFGGKDCIGDVTESQVCNKQDCPIDGCLSNPCFAGAKCTSYPDGSWKCGACPAGYSGNGIQCKDVDECREVPDACFNHNGEHRCKNTDPGYNCLPCPPRFTGTQPYGQGVQHATANKQVCKPRNPCTDGTHNCNKNAKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNLPNSGQEDYDKDGIGDACDEDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGFDEFNAVDFSGTFFINTERDDDYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNALWHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS