Sequence details NCBI ID: XM_004861483.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Col4a5
Gene Name collagen, type IV, alpha 5
Entrez Gene ID 101709338

Database interlinks

Part of NW_004624803.1 (Scaffold)

For more information consult the page for NW_004624803.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COL4A5 ENSCPOG00000015081 (Guinea pig)

Gene Details

collagen, type IV, alpha 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013595, Guinea pig)

Protein Percentage 88.48%
CDS Percentage 89.19%
Ka/Ks Ratio 0.30316 (Ka = 0.0764, Ks = 0.252)

COL4A5 ENSG00000188153 (Human)

Gene Details

collagen, type IV, alpha 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000331902, Human)

Protein Percentage 91.45%
CDS Percentage 90.76%
Ka/Ks Ratio 0.17886 (Ka = 0.0472, Ks = 0.2636)

Col4a5 ENSMUSG00000031274 (Mouse)

Gene Details

collagen, type IV, alpha 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108553, Mouse)

Protein Percentage 88.52%
CDS Percentage 87.55%
Ka/Ks Ratio 0.16241 (Ka = 0.0648, Ks = 0.3991)

Genome Location

Sequence Coding sequence

Length: 4917 bp    Location: 7916365..7510340   Strand: -
Raw sequence   
>XM_004861483.1
ATGAAACTGCGTGGAGTCAGCCTGGCTGTCGGCTTGTTCTTACTGGCCCTGAGTGTTTGGGGGCAGCCCGCAGAGGCTGCGGCTTGCTATGGTTGTCCTCCAGGATCAAAGTGTGACTGTAGTGGTGTAAAAGGAAAAAAGGGAGAGAGAGGATTTCCAGGTTTGGAGGGCCATTCAGGTTTGCCTGGATTTCCAGGTCCAGAAGGGCCTCCAGGGCCTCCAGGTCAAAAGGGTGATGTCGGAATTCCAGGACCACTGGGACCAAAAGGAATCAGAGGTCCTCCTGGACTTCCTGGATTTCCAGGGACACCGGGTCTTCCCGGAATGCCAGGCCATGATGGAGCTCCTGGTCCTCAAGGTATCCCTGGATGCAATGGAACCAAGGGAGAACGTGGATATCCAGGCAGTCCTGGTTTTCCTGGTTTACAGGGTCCTCCAGGACCTCCTGGGATCCCTGGTATGAAGGGGGAACCCGGTAATATAATTATGGCATCACTGCCAGGACCAAAGGGTAACCCAGGATATCCAGGTCCTCCTGGAATTCAAGGCCCAGCTGGTCCAATGGGAATACCTGGGCCAACTGGTCCTCCAGGACCGCCAGGTTTGTTGGGCCCTCCTGGCCCACCAGGACCACCAGGACCAAAGGGGAATATGGGTTTAAATTTTCAAGGACCTAAGGGTGAAAAGGGTGAGCAAGGTCTTCAGGGCCCTCCTGGACCACCTGGGCAGATCAGTGAACAGAAAAGACCAATTGATGTAGAGTTTCAGAAAGGAGATCAGGGACTTCCTGGTGACCAAGGGCCTCCTGGACCTCCAGGGATACGTGGTCCTCCAGGTCCTCCAGGTGGTGGGAAAGGTGAGAAGGGTGAGCAAGGAGAACCAGGCAAAAGAGGTAAACCAGGCAAAGATGGAGAGAATGGTCAACCTGGCAATCCAGGTTTACCTGGTGATCCTGGTTACCCTGGTGAACCAGGAAGGGATGGTGAAAAGGGCCAAAAAGGCGACATTGGTCCACCTGGGCCTCCTGGAGTTGTAATTCCTAGACCTGGTACTGGTGTCACTACAGGAGAAAAAGGAAATACTGGCTTACCTGGTTTGCCGGGAGAAAAAGGAGAGCAAGGATTTCCTGGAATGCAGGGTCCACCTGGCCTTCCTGGTCTTCCAGGCACTGCAGTTATGGGTCCTCCTGGGCCCACTGGATTTCCTGGAGAAAGAGGCCAGAAAGGTGATGAAGGTCCACCCGGTATTTCTATTCCTGGATCTCCTGGACTTGATGGACATCCTGGGCCTCCTGGCCTTCCAGGACCTCCTGGCCCACCAGGCCCTCACATCCCTCCTAGTGATGAGACATGTGAACCAGGACCTCCAGGTCCCCCAGGAGCTCCAGGTGATAAAGGACTCCAAGGAGAACAAGGATTGAAAGCTATGGGCATACCAGGAGCTCCAGGTGCTCCAGGACTTCCTGGAACTAAAGGGGAGCCTGGTGACATCTTCACTTTTCCAGGAATGAAGGGTGAAAAAGGAGAGTTTGGTGCTCCTGGAGCTCCGGGACTTCCTGGTTTACCCGGCATGCCTGGGCAGGATGGATTTCCAGGTCTTCCTGGCCCCAAAGGAGAGCCTGGTGGAATTGCTTTTAAGGGTGAAAGAGGTCCCCCTGGGAATCCAGGTTTGCCAGGTCTCCCAGGGAATATGGGACCCATGGGCCCTGTTGGTTTTGGCCCTCCTGGTCCAATAGGTGAAAAAGGCATACAAGGTATTGCAGGAAACCCAGGCCAGCCAGGAATACCAGGTCCTAAAGGTGATCCAGGTCAGACCATAACACAGCCAGGGAAGCCTGGGCTGCCTGGCAACCCAGGTAGAGATGGTGAAGTAGGTCTTCCAGGTGATCTTGGGCTCCCAGGCCAACCGGGTTTGCCAGGAATACCTGGTAGCAAAGGAGAAGCAGGTATTCCTGGGATTGGGCTTCCTGGACCACCAGGTCCCAAAGGTTTTCCAGGAGTCCCAGGACCTCCAGGAGCAACTGGGATCCCCGGGAGAATTGGTCTAGAAGGCCCTCCTGGGCCACCAGGCTTTCCAGGACCAAAGGGAGAGCCAGGATTTGGGTTACCTGGGCCACCTGGGCCACCAGGACTTCCAGGTTTCAAAGGAACACTTGGTCCAAAAGGTGATCGTGGTTTCCCAGGACCTCCAGGTCCTCCAGGACGCACTGGCTTGAATGGGCTACCTGGACCTAAAGGTGATGTTGGACCAAATGGGCAGCCTGGACCAATAGGACCTCCTGGGCAGCCAGGAATTGGTGTTCAGGGACCACCAGGACCACCAGGAATTCCTGGACCAATGGGCCAACCAGGCTTACATGGAATACCAGGAGAGAAGGGGGATCCAGGACTTCCTGGATTTGATGTTCCAGGACCTCCTGGTGAGAGGGGCAGTCCAGGGATCCCTGGAGTACTTGGCCCTGTGGGACCTCCAGGATCACCAGGGCTCCCAGGAAAGGCAGGTGCCCCTGGATTCCCAGGCACCAAAGGTGAAATGGGTATGATGGGACCTCCAGGCGCACCAGGACCTTTAGGAATTCCTGGCAGGAATGGTGCTCCTGGTCTTAAAGGCAATGATGGCTTACAGGGTCAGCCAGGACTTCCTGGCTCTGCAGGAGAAAAAGGTGGTAAGGGAGAACCTGGCCTTCCAGGCCCTCCTGGACCAAGGGATCCAAATCTCCTAGCCTCAAAAGGAGAAAAGGGAGAACGTGGCTTACCAGGTATTCCTGGAATCTCAGGACCAAAAGGCTACCAGGGTTTGCCTGGAGACCCAGGGCAACCTGGACTGAGTGGAGAACCTGGATTACCAGGACTACCAGGTCCCAAGGGTGATCCTGGTTTCCCTGGCCAGCCAGGACTTATAGGACCTCCTGGACTTAAAGGAAACATAGGTGATATGGGTTTTCCAGGTCCTCAGGGTGTGGAAGGACTGACCGGACCTCCTGGAGTTCCTGGACAACCTGGTTCCCCAGGATTACCTGGACAGAAAGGAGACAAAGGTGATCCTGGCATTTCAGGCATTGGTCTTTCAGGTCTTACTGGCCCAAAGGGTGAACCTGGTCTGCCGGGAATCCCAGGGAACCCAGGTATCAAAGGTTCTATGGGAGTTACTGGTTTACCTGGATTACCAGGAACACCTGGAGCAAAAGGACAACCTGGACTTTCTGGGTTCCCAGGAACCCCAGGCCTTCCTGGGCCAAAAGGAATTAGTGGTCCTCCTGGGAATCCTGGCCTTCCGGGAGAACCTGGTCCTATAGGTGGTGGAGGTCATCCTGGGCCCCCAGGGCCTCCAGGTGAAAAAGGAACACCAGGTCAAGATGGTATCCCTGGGCCAGCTGGACAGAAGGGTGAACCAGGTCAGCCAGGTTTTGGAATTCCAGGAGCCCCTGGACTCCCAGGACTTTCTGGTCAAAAGGGTGATGGAGGGTTACCTGGCATTCCCGGAAACCCTGGCCTTCCAGGTCTAAAGGGTGAACCAGGCTTTCAGGGTTTCCCTGGTGTACAGGGTCCCCCAGGCCCTCCTGGTTCTCCAGGTCCAGCTCTCGAAGGCCCTAAAGGCAACTCTGGGCCGCAAGGTCCTCCTGGAAGACCAGGTCCTCCAGGTTTTCAAGGTCTACCAGGTCCAGAAGGTCCCCGTGGTCTCCCTGGAAATGGAGATGTTAAAGGAGAAAGGGGAAACCCAGGCCCACCTGGGCCACCTGGCTTGCCGGGTCTGAAAGGAGATCAAGGACCACCGGGACTCTCGGGTAATCCTGGCCGGCCAGGTCTCAATGGAATGAAAGGAGATCCTGGTCTTCCTGGTGTTCCAGGATTCCCAGGCATGAAAGGACCCATTGGAGTACCTGGTTCAACTGGCCCTGAGGGGGAACCAGGACTTACTGGATCCCCAGGTCCTCCTGGATTACCTGGTCCTTCAGGACACAGTATTATAATCAAAGGAGATGCTGGTCCTCCAGGGATCCCTGGCCAGCCTGGTTTAAAAGGTCCACCAGGACTATCAGGCCCTCAAGGCTTACCAGGTCCAGTTGGTCCTCCAGGGGATCCTGGACGTAATGGACTTCCTGGCTTTGATGGTGCAGGAGGGCGCAAAGGAGACACAGGTCTGCCAGGCCAGCCAGGTGCCCGTGGTTTGGATGGTCCTCCAGGACTAGATGGGTTGCAAGGTCCACCAGGTCCCCCTGGAACCACTTCAGTTGCCCATGGATTTCTCATCACACGCCACAGCCAGACAGTGGATGCACCACAATGCCCACAGAGAACAGTCCAGATCTCTGAAGGTTTTTCTCTCTTGTATGTACAAGGAAATAAAAGAGCCCATGGTCAAGACTTGGGAACCTCTGGCAGCTGTCTTCGTCGCTTCAGTACCATGCCTTTCATGTTCTGCAATATCAATAATGTTTGCAACTTTGCTTCAAGAAATGACTATTCTTACTGGCTTTCTACTCCAGAGCCTATGCCAATGAGCATGGAACCCTTGAAGGGTCAGAGCATTCAGCCATTCATCAGTCGATGTGTAGTATGTGAAGCTCCAGCTATGGTGATTGCAGTTCACAGTCAGACCATCCAGATTCCTCATTGTCCTCAGGGATGGGATTCTCTGTGGATTGGTTACTCCTTTATGATGCATACAAGTGCAGGGGCAGAGGGCTCAGGTCAAGCCCTGGCCTCACCTGGCTCCTGTTTGGAAGAGTTTCGTTCTGCTCCCTTCATCGAATGTCATGGGCTAGGAACGTGTAACTACTATGCCAACTCCTACAGCTTTTGGCTAGCAACTATAGATGTGTTGGACATGTTCAGTAAGCCTCAATCAGAAACACTGAAAGCAGGAGACTTGAGGACACGTATTAGCCGATGCCAAGTATGCATGAAAAGGACATAA

Related Sequences

XP_004861540.1 Protein

Col4a5 PREDICTED: collagen alpha-5(IV) chain [Heterocephalus glaber]

Length: 1638 aa      View alignments
>XP_004861540.1
MKLRGVSLAVGLFLLALSVWGQPAEAAACYGCPPGSKCDCSGVKGKKGERGFPGLEGHSGLPGFPGPEGPPGPPGQKGDVGIPGPLGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQGIPGCNGTKGERGYPGSPGFPGLQGPPGPPGIPGMKGEPGNIIMASLPGPKGNPGYPGPPGIQGPAGPMGIPGPTGPPGPPGLLGPPGPPGPPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLPGDQGPPGPPGIRGPPGPPGGGKGEKGEQGEPGKRGKPGKDGENGQPGNPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGVVIPRPGTGVTTGEKGNTGLPGLPGEKGEQGFPGMQGPPGLPGLPGTAVMGPPGPTGFPGERGQKGDEGPPGISIPGSPGLDGHPGPPGLPGPPGPPGPHIPPSDETCEPGPPGPPGAPGDKGLQGEQGLKAMGIPGAPGAPGLPGTKGEPGDIFTFPGMKGEKGEFGAPGAPGLPGLPGMPGQDGFPGLPGPKGEPGGIAFKGERGPPGNPGLPGLPGNMGPMGPVGFGPPGPIGEKGIQGIAGNPGQPGIPGPKGDPGQTITQPGKPGLPGNPGRDGEVGLPGDLGLPGQPGLPGIPGSKGEAGIPGIGLPGPPGPKGFPGVPGPPGATGIPGRIGLEGPPGPPGFPGPKGEPGFGLPGPPGPPGLPGFKGTLGPKGDRGFPGPPGPPGRTGLNGLPGPKGDVGPNGQPGPIGPPGQPGIGVQGPPGPPGIPGPMGQPGLHGIPGEKGDPGLPGFDVPGPPGERGSPGIPGVLGPVGPPGSPGLPGKAGAPGFPGTKGEMGMMGPPGAPGPLGIPGRNGAPGLKGNDGLQGQPGLPGSAGEKGGKGEPGLPGPPGPRDPNLLASKGEKGERGLPGIPGISGPKGYQGLPGDPGQPGLSGEPGLPGLPGPKGDPGFPGQPGLIGPPGLKGNIGDMGFPGPQGVEGLTGPPGVPGQPGSPGLPGQKGDKGDPGISGIGLSGLTGPKGEPGLPGIPGNPGIKGSMGVTGLPGLPGTPGAKGQPGLSGFPGTPGLPGPKGISGPPGNPGLPGEPGPIGGGGHPGPPGPPGEKGTPGQDGIPGPAGQKGEPGQPGFGIPGAPGLPGLSGQKGDGGLPGIPGNPGLPGLKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNSGPQGPPGRPGPPGFQGLPGPEGPRGLPGNGDVKGERGNPGPPGPPGLPGLKGDQGPPGLSGNPGRPGLNGMKGDPGLPGVPGFPGMKGPIGVPGSTGPEGEPGLTGSPGPPGLPGPSGHSIIIKGDAGPPGIPGQPGLKGPPGLSGPQGLPGPVGPPGDPGRNGLPGFDGAGGRKGDTGLPGQPGARGLDGPPGLDGLQGPPGPPGTTSVAHGFLITRHSQTVDAPQCPQRTVQISEGFSLLYVQGNKRAHGQDLGTSGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPFISRCVVCEAPAMVIAVHSQTIQIPHCPQGWDSLWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGLGTCNYYANSYSFWLATIDVLDMFSKPQSETLKAGDLRTRISRCQVCMKRT