Details from NCBI annotation

Gene Symbol Ammecr1
Gene Name Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, transcript variant X1
Entrez Gene ID 101715875

Database interlinks

Part of NW_004624803.1 (Scaffold)

For more information consult the page for NW_004624803.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AMMECR1 ENSCPOG00000005403 (Guinea pig)

Gene Details

Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004863, Guinea pig)

Protein Percentage 98.2%
CDS Percentage 97.1%
Ka/Ks Ratio 0.10642 (Ka = 0.0087, Ks = 0.082)

AMMECR1 ENSG00000101935 (Human)

Gene Details

Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262844, Human)

Protein Percentage 97.59%
CDS Percentage 95.78%
Ka/Ks Ratio 0.09026 (Ka = 0.0116, Ks = 0.1282)

Ammecr1 ENSMUSG00000042225 (Mouse)

Gene Details

Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000036085, Mouse)

Protein Percentage 97.88%
CDS Percentage 92.93%
Ka/Ks Ratio 0.03546 (Ka = 0.01, Ks = 0.281)

Ammecr1 ENSRNOG00000022166 (Rat)

Gene Details

Protein Ammecr1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043945, Rat)

Protein Percentage 98.18%
CDS Percentage 93.13%
Ka/Ks Ratio 0.03166 (Ka = 0.0086, Ks = 0.2713)

Genome Location

Sequence Coding sequence

Length: 1002 bp    Location: 5596517..5723949   Strand: +
>XM_004861437.1
ATGGCGGCGGGTTGCTGTGGGGTAAAGAAACAGAAACTGTCCAGTTCGCCCCCCTCTGGCTCGGGTGGCGGTGGTGGCGCCTCCTCCTCCTCCCACTGCAGCGGAGAGAGCCAGTGTCGAGCTGGGGAGCTGGGACTAGGAGGCGCCGGTACGAGGCTCAACGGGCTTGGAGGTCTAACTGGAGGAGGTAGCAGCAGTGGCTGTACCCTCTCTACCCCCCAGGGTTGCGGTGGCGGCGGCGGCGGGGGGATCTCCCTCTCGCCACCTCTGAGCTGCGGAGTGGGGACCTTACTTTCTACCCCGGCCGCCGCCACCGCTTCCTCGCCCTCTTCGTCCGCCGCCTTGTCCTCATTACCGGGCTCCCGGAAGATGGTGGTTTCAGCGGAGATGTGCTGCTTTTGCTTCGATGTGCTCTACAGTCACCTGTACGGATACCAGCAGCCCCGTACCCCCCGGTTCACCAACGAGCCCTACCCACTGTTTGTAACATGGAAGATTGGTCGAGACAAAAGATTGCGTGGATGCATAGGTACTTTTTCTGCCATGAATTTGCATTCAGGACTCAGGGAGTACACACTTACCAGTGCCCTTAAAGATAGCCGTTTTCCCCCAATGACAAGGGATGAGCTGCCACGGCTTTTCTGCTCAGTGTCTCTGCTCACTAACTTTGAAGATGTCTGTGATTATTTGGACTGGGAGGTGGGTGTACATGGCATTAGAATAGAATTCATCAATGAAAAAGGATCAAAACGCACCGCCACCTACCTACCGGAGGTTGCAAAGGAGCAAGGATGGGACCATATTCAGACCATAGATTCCTTACTAAGGAAAGGAGGATACAAAGCTCCAATTACTAATGAATTCAGGAAAACCATAAAACTGACCAGATACCGTAGTGAAAAGATGACCCTGAGTTATGCTGAATACCTTGCTCATCGCCAACATCATCATTTTCAAAATGGCATTGGGCATCCCCTTCCGCCATACAACCATTATTCCTGA

Related Sequences

XP_004861494.1 Protein

Ammecr1 PREDICTED: AMME syndrome candidate gene 1 protein isoform X1 [Heterocephalus glaber]

Length: 333 aa      View alignments
>XP_004861494.1
MAAGCCGVKKQKLSSSPPSGSGGGGGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSSSGCTLSTPQGCGGGGGGGISLSPPLSCGVGTLLSTPAAATASSPSSSAALSSLPGSRKMVVSAEMCCFCFDVLYSHLYGYQQPRTPRFTNEPYPLFVTWKIGRDKRLRGCIGTFSAMNLHSGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWEVGVHGIRIEFINEKGSKRTATYLPEVAKEQGWDHIQTIDSLLRKGGYKAPITNEFRKTIKLTRYRSEKMTLSYAEYLAHRQHHHFQNGIGHPLPPYNHYS