| Gene Symbol | Rgag1 |
|---|---|
| Gene Name | retrotransposon gag domain containing 1 |
| Entrez Gene ID | 101715166 |
For more information consult the page for NW_004624803.1 (Scaffold)
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
| Protein Percentage | 72.38% |
|---|---|
| CDS Percentage | 85.03% |
| Ka/Ks Ratio | 0.86496 (Ka = 0.1724, Ks = 0.1993) |
retrotransposon gag domain containing 1
| Protein Percentage | 69.3% |
|---|---|
| CDS Percentage | 81.37% |
| Ka/Ks Ratio | 0.64607 (Ka = 0.2036, Ks = 0.3151) |
retrotransposon gag domain containing 1
| Protein Percentage | 65.7% |
|---|---|
| CDS Percentage | 78.22% |
| Ka/Ks Ratio | 0.54823 (Ka = 0.232, Ks = 0.4232) |
| Protein Percentage | 65.85% |
|---|---|
| CDS Percentage | 77.7% |
| Ka/Ks Ratio | 0.51941 (Ka = 0.2349, Ks = 0.4521) |
>XM_004861436.1 ATGGCAGACATGTCAATACCTTTACATTCACTGCAATTCAACAATATGCTGAGGGAGGAAAATGTGGACTCCCAAAACATGGAGACGACTTTCTCTAGACCAATGACAGAGAACAGAGCAGAGGTCCAATTTCTGCATTCTTATGCACAGTTGCCCATAGTCTCAACTTCCGCCTCAGACCCTGCAGGGACATCCACACAGACATCCCCAGCCTTTGACACAATGTCCACACTTCTAATGGGAGCACCAAACTCTGGAGTGTTGTCCCCACCACTAATGACAGCCTCAGACTCTGCCTCAGATTCTGGAGCACTGTCCCCACTTTTAATGCCAGCCTCAGATTCTGGAACATTGTCCCCAATGCTAATGCCAGTCTCGGATTCTGGGGCACTGTCCCCCCTGCTAATGCCAGCCTCAGACTCTGGAGCATTGTCCCCATCATTGTCCATTTCAGACTATGGGTTAATGTCTCCAGGAATGTTGACAATTCCTGACTTTGGAACAATGTCTACAGCACTAAAGCCCACAGATTCTGCAGAGATGTCACCACTGGCAATTACAGGTCTATCATCTGGAGAAATGTCTACACCTATAACGAGCACCTTATCCTCTGAAGCAATGTCTACACCATTAATGCTTGCCCCAGATCCTGGAGAGACATCCCCATTCCTAATTCCAGACATAAACCCTGGAATTTTATCCACACAGTCAACAACAACTCCAGGCTGTGAAGAAATGTTCCCATTGCAAATTACAGATGAAGACACTGAAGCAATGTCCAAAGTGCTAATGACTGCCCTAGCCTCTGGAGAGATATCTTCACTGCTCATGTCAGGCACAGACTCTGAAGCAATATCCTCATTCATAATGTCAGCCCTATCTTCTGGAGAAACATCAATCAAGTCAACAAACACCCAAGACTCTGAGGGAATGTCTAACCCACTCATAGCAGGCTCAGACTCTGGGGTTATGTCTTCACTGCTAATGACAGCTTCAGGCTCTGAAATGACATCCCCACCACAGCTGTCCATCTCAGATGCTGGAGAAACATCCACATTACCAATGCCAGCCTCAGATGCTGAAGCCGTGTCCCCACTGCTAATGACAGCCCTCACCTCTGAAGAGATGCCCACCCAACTGATGCCAGCCCCCAGCTCTGGAGTGATGCCCTCACAGTTAACACAAAATCTGGACTCTGAAATCATGTCTACTCCACCAACGAGAGCAACAGTCTCTGCAGTGATGTCCACAATGCCAGTGACAGCTTCAGACTCAGGAGCAACATCCACACCGTTAATGAGAATATCAGCCTCTGGACATATGTCCACATTGCATAAGATAGTTCCAGCCTCTGGAACAATGTCCACACCACTAATGACAGTCACAAGCTCTGGAGAGAAGTTCACAGAGAAAATGTCAATCACATCTTCTAGAGCAATGTCAACACAGTCTATGGCCAAAACTTCTGGAACAATACCCACAGGTTTTGTGAAGGCCACAGCCCGTGAAGCAATGTCCACAAAGCAAATGAAAGCCCAAGATTCTCGGGTGATGTCCACACAGCCAGTTACAGCAACAACATCTGAAACAATATATATGCCACAACCAATAGTCACAGCCTCTGGGTCGCTGTCCACACAGCAAACCAGAGCCCCTGTCTCTGGAACAATGTCCATATCACAGGTGAGAACCATAGCCTCAGCACTGACATCTACACAACAAATGGGAGCCACAGCCTCTGAAGCAGTGTCCATTCCACGAATAACAGCCAAAGTCTCTAGCTCAATGGCCCCACTGCTAATGAGAGACACAGCTTCGGGAATGATGTCCATGCCACAAACGAGAGCTCTGACTTCTGGAACATTATCCAACCCACTAATGATACCCAAACCTTCTGGAACAGTGTTTATGCAGCAAATGACAACAGCAGCTTCTAGAGAAATGTCTTCAGTTCTAATGAGGGCCACAACTTCTGGAGCTCCATCCTTGCCACAAATGACAGACACAGCCTCAGGAGGGATATCCACACTGTCCCAGAGAGCCACAGTCTCTGGAGCAATGCTCACATTACAGACAACTCCCAAAGCCTCTGGAGATATATCCATGCCTCTATTGAGAGCCCCAGGCCCTGCAGGAATGTCCACATCACTAATGAGAGCCACAGACTCTGAGAAGATGCCCAATCAGCCAATAAGCACCCAAGACTCTGGAGAGATGTCCACATCACTCAGGAGATCCACGATCACTGGAGGGGTACAGATGAGAACCCATGCCTCTGGATTGATGCCCACACCACCAATGAGGGCCTCAGACTCTGGAGAGTTGTCCACACACAGGAGAGTCTCACCCTCTGGAGAGAGATCTGTTCCCCTGAGACTCCTGGCTTCTGCAGAAACAGTGACACCTCCAAGAGCCCCAGCTTGTGAAACAGTATCTGTTCCACAAATTATAGACACAGCTTCTGGAATGATGTCCATGCCACAGATGAAGGCTTCAGTCTCTGGAGCAGTGTCTACACCACTAATGAGATTCACAGCCCCTGGAGGGACATTCATGTCTCAAGTGACATCTACAGCTTCTGGAGGGATGTCTTTGCCACTAATGAGAACCCCAGCCTCTAGAGTAAGGTCCACACCACAAATGGCTCCCACAGCTTCTGGAGACACGCACAAACTCCCAATGCAAGCACCAGCTTCTGGAGTGATAGCGTTACCACAAGTCAGAGCACCAGCCTCCAGAACCATGTTCACACCACTAAGGAGATTCTCAGCCTCTGGAGCTGTGTCCACAGAGCTAATGAGAGCTCCAGCCTCTGGAAAGATGCCTACTGCACAAACAACAGGCATGGCCTCTGAAGGGATGTTCAAACCATTAATGAGAACCATGCCCTCTGAAACAATGCCCATGCCTTTGAGGTCATCCACGGCTTCTGGAGAGATGTCTAAGCCACTAATGAAAAACATGGCCTCTGGAGCAAGGCCAAAGCTGCAAACCAAAGTCATAAGCTCTAGATCTATGTCCTTGCCACAATCAACAAAAAAGCCTTCTGGAGGAAGAGCTAAGTCACCAATGATAGTCTCAGCTTCTGGAACGATGTCTACACCACTAGTGAAATGCACAGCCTCTAGAGGTATATCCATGCCACAAATGACAGCCATGGCTTCAGGAGTGAGGTCTACATCACACACGAAGGCCCCAGACTCTGGAGCAACGTCCACACCACAAACAGCCTTTGGAATGATGTCCACTCTGGAAATCAAAGCCACAGATTCTGGAGAGGCATCTACTTCACATATCAAAGTCACACCCTCTGGATTGAGGGCTACACCACACATGACTGCCAGAACCCCTGAAACAAGCCCACCACCAAAGGAAGTGTCATCCTTTGGAATGTTGACTCCAGCACTTTGTTACCTCTTAGAGGAGCAGGAAGCAGTCCGTGCTTCATGCTCAGCAGAGGAGGAGATGGAGATTGATGAGGAGAAGCAAATGAGGGGTTTTCTGGATGATTCAGAGAAAATAGCATTTCTGGTGTCTCTTCATCTGGGTGCAGCAGAGAGGTGGTCTATCTTGCAGATGGAGGTGGGAAACCCCCTCTCAGATGAAAATAAATCATTCATGTGCAAAGCACAAGGCTTATATGATTCCTTATCTGAGATAGACATCCTCAGTGCTGTTCTTTGCCATCCCAAGCAGGGCCAGAAGTCAGTCAGGCAGTATGCCACTGACTTCCTGCTGCTGGCCCGAAATATGTCTTGGTCTGATGCCATTCTACGGGCCAGGTTTTTGGAAGGACTTTCAGAAGCTATTACTACCAAAATGGGTCAGATCTTCCTGAAGGTGGCTAGCAGCCTAAAGGAGCTAATAGACAGGTCTCTCTACACAGAGTGCCAGCTGGCAGAGGAGAAGGGTTCCTTGGGCAAATCAAGCCAGGTTCTGCCGACAGCCTGTAAGCGGAATAATGAGGAGGCCATGGAGAATGAACTGAACTCTCAGCAGCAGACTGAGGAGTCTCATTATCAACATGTTCCCAAACGCTGTTACTACCTGAAAGAGCGTGAAGATCCCCGAAAGTGTCTTCACGACTACCTTCGACAGAGCACAGGTCATCAGAAGCACTCTGCAAACAAATAA
Rgag1 PREDICTED: retrotransposon gag domain-containing protein 1-like [Heterocephalus glaber]
Length: 1377 aa View alignments>XP_004861493.1 MADMSIPLHSLQFNNMLREENVDSQNMETTFSRPMTENRAEVQFLHSYAQLPIVSTSASDPAGTSTQTSPAFDTMSTLLMGAPNSGVLSPPLMTASDSASDSGALSPLLMPASDSGTLSPMLMPVSDSGALSPLLMPASDSGALSPSLSISDYGLMSPGMLTIPDFGTMSTALKPTDSAEMSPLAITGLSSGEMSTPITSTLSSEAMSTPLMLAPDPGETSPFLIPDINPGILSTQSTTTPGCEEMFPLQITDEDTEAMSKVLMTALASGEISSLLMSGTDSEAISSFIMSALSSGETSIKSTNTQDSEGMSNPLIAGSDSGVMSSLLMTASGSEMTSPPQLSISDAGETSTLPMPASDAEAVSPLLMTALTSEEMPTQLMPAPSSGVMPSQLTQNLDSEIMSTPPTRATVSAVMSTMPVTASDSGATSTPLMRISASGHMSTLHKIVPASGTMSTPLMTVTSSGEKFTEKMSITSSRAMSTQSMAKTSGTIPTGFVKATAREAMSTKQMKAQDSRVMSTQPVTATTSETIYMPQPIVTASGSLSTQQTRAPVSGTMSISQVRTIASALTSTQQMGATASEAVSIPRITAKVSSSMAPLLMRDTASGMMSMPQTRALTSGTLSNPLMIPKPSGTVFMQQMTTAASREMSSVLMRATTSGAPSLPQMTDTASGGISTLSQRATVSGAMLTLQTTPKASGDISMPLLRAPGPAGMSTSLMRATDSEKMPNQPISTQDSGEMSTSLRRSTITGGVQMRTHASGLMPTPPMRASDSGELSTHRRVSPSGERSVPLRLLASAETVTPPRAPACETVSVPQIIDTASGMMSMPQMKASVSGAVSTPLMRFTAPGGTFMSQVTSTASGGMSLPLMRTPASRVRSTPQMAPTASGDTHKLPMQAPASGVIALPQVRAPASRTMFTPLRRFSASGAVSTELMRAPASGKMPTAQTTGMASEGMFKPLMRTMPSETMPMPLRSSTASGEMSKPLMKNMASGARPKLQTKVISSRSMSLPQSTKKPSGGRAKSPMIVSASGTMSTPLVKCTASRGISMPQMTAMASGVRSTSHTKAPDSGATSTPQTAFGMMSTLEIKATDSGEASTSHIKVTPSGLRATPHMTARTPETSPPPKEVSSFGMLTPALCYLLEEQEAVRASCSAEEEMEIDEEKQMRGFLDDSEKIAFLVSLHLGAAERWSILQMEVGNPLSDENKSFMCKAQGLYDSLSEIDILSAVLCHPKQGQKSVRQYATDFLLLARNMSWSDAILRARFLEGLSEAITTKMGQIFLKVASSLKELIDRSLYTECQLAEEKGSLGKSSQVLPTACKRNNEEAMENELNSQQQTEESHYQHVPKRCYYLKEREDPRKCLHDYLRQSTGHQKHSANK