Details from NCBI annotation

Gene Symbol Chrdl1
Gene Name chordin-like 1, transcript variant X1
Entrez Gene ID 101713654

Database interlinks

Part of NW_004624803.1 (Scaffold)

For more information consult the page for NW_004624803.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHRDL1 ENSCPOG00000006712 (Guinea pig)

Gene Details

chordin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006047, Guinea pig)

Protein Percentage 96.08%
CDS Percentage 93.39%
Ka/Ks Ratio 0.07901 (Ka = 0.0183, Ks = 0.2312)

CHRDL1 ENSG00000101938 (Human)

Gene Details

chordin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000361112, Human)

Protein Percentage 96.07%
CDS Percentage 93.23%
Ka/Ks Ratio 0.07855 (Ka = 0.0185, Ks = 0.2351)

Chrdl1 ENSMUSG00000031283 (Mouse)

Gene Details

chordin-like 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108499, Mouse)

Protein Percentage 90.38%
CDS Percentage 88.52%
Ka/Ks Ratio 0.11523 (Ka = 0.0468, Ks = 0.4061)

Chrdl1 ENSRNOG00000004330 (Rat)

Gene Details

chordin-like 1 (Chrdl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006008, Rat)

Protein Percentage 88.52%
CDS Percentage 87.42%
Ka/Ks Ratio 0.13866 (Ka = 0.0587, Ks = 0.423)

Genome Location

Sequence Coding sequence

Length: 1380 bp    Location: 5011110..5143694   Strand: +
>XM_004861433.1
ATGAGGAAAAAGTGGAAAACGGGAGGCATGAAATACATCTTTTCCTTGTTGTTTTTCTTTCTTTTCATAGAAGGAAGCAAAACAGAGCAAGTAAAACATTCAGAGACATACTGTATGTTTCAAGATAAGAAGTACAGAGTGGGTGAGAGATGGCATCCTTACCTGGAACCTTATGGGTTGGTTTACTGTGTGAATTGCATCTGCTCAGAGAATGGGAATGTGCTTTGCAGCCGAGTCAGATGTCCAAATCTTCATTGCCTCTCCCCTGTGCATGTTCCACATCTGTGCTGCCCTCGCTGCCCAGAAGACTCCTTACCCACAGTGAACAATAAAGTGACCAGCAAGTCTTGTGAGTACAATGGAACCACTTACCAACATGGAGAGCTATTCATGGCCGAGGGGCTCTTTCAGAACCGGCAACCCAATCAGTGCACCCAGTGCAGCTGCTCGGAAGGGAATGTATATTGTGGTCTCAAGACTTGCCCCAAATTAACCTGTGCATTCCCAGTCTCTGTTCCAGATTCCTGCTGCCGGGTATGCAGAGGGGATGGAGAATTGTCGTGGGAACATTCTGATGGTGACATCTTCCGGCAACCTGCCAGTAGAGAAGCAAGACACTCTTACCACCGCTCCCACTATGATCCTCCAACAAGCCGACAGGCAGGAGGGTTCCCCCGCTTTCCTGGGGCCAGAAGTCACCGGGGAGCTCTTGTGGACTCACAGCAAGCATCAGGGACCATCGTGCAGATTGTCATCAATAATAAACACAAGCATGGACAAGTGTGTGTTTCCAATGGAAAGACCTATTCCCATGGCGAATCCTGGCACCCAAACCTCAGGGCATTTGGCATTGTGGAGTGTGTGCTGTGCACTTGTAATGTCACCAAGCAAGAGTGTAAGAAAATCCACTGCCCCAATCGATACCCCTGCAAGTATCCTCAAAAAATAGATGGAAAGTGCTGCAAGGTGTGTCCAGGTAAAAAAGCAAAAGAAGAACTTCCAGGCCAAAGCTTTGATAGTAAAGGCTACTTTTGCGGAGAAGAAACAATGCCCGTGTATGAGTCTGTATTCATGGAGGATGGGGAGACTACCAGAAAAATAGCACTGGAGACTGAAAGACCACCTCAGGTAGAGGTCCATGTTTGGACCATTCGAAAAGGCATCCTCCAGCGCTTCCACATTGAAAAGATCTCGAAAAGAATGTTTGAAGAACTCCATCTCTTCAAACTGGTGACCAGGACAACCCTGAGCCAGTGGAAGATATTCACTGAAGGAGAAGCTCAGATCAGCCAGATGTGTTCAAGTCGTGTTTGCAGAACAGAGCTTGAAGATTTGGTCAAAGTTTTGTACCTGGAGAGATCTGAAAAGGGCCACTGTTAG

Related Sequences

XP_004861490.1 Protein

Chrdl1 PREDICTED: chordin-like protein 1 isoform X1 [Heterocephalus glaber]

Length: 459 aa      View alignments
>XP_004861490.1
MRKKWKTGGMKYIFSLLFFFLFIEGSKTEQVKHSETYCMFQDKKYRVGERWHPYLEPYGLVYCVNCICSENGNVLCSRVRCPNLHCLSPVHVPHLCCPRCPEDSLPTVNNKVTSKSCEYNGTTYQHGELFMAEGLFQNRQPNQCTQCSCSEGNVYCGLKTCPKLTCAFPVSVPDSCCRVCRGDGELSWEHSDGDIFRQPASREARHSYHRSHYDPPTSRQAGGFPRFPGARSHRGALVDSQQASGTIVQIVINNKHKHGQVCVSNGKTYSHGESWHPNLRAFGIVECVLCTCNVTKQECKKIHCPNRYPCKYPQKIDGKCCKVCPGKKAKEELPGQSFDSKGYFCGEETMPVYESVFMEDGETTRKIALETERPPQVEVHVWTIRKGILQRFHIEKISKRMFEELHLFKLVTRTTLSQWKIFTEGEAQISQMCSSRVCRTELEDLVKVLYLERSEKGHC