Details from NCBI annotation

Gene Symbol Capn6
Gene Name calpain 6
Entrez Gene ID 101712448

Database interlinks

Part of NW_004624803.1 (Scaffold)

For more information consult the page for NW_004624803.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN6 ENSCPOG00000000652 (Guinea pig)

Gene Details

calpain 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000575, Guinea pig)

Protein Percentage 95.79%
CDS Percentage 94.33%
Ka/Ks Ratio 0.12887 (Ka = 0.0219, Ks = 0.17)

CAPN6 ENSG00000077274 (Human)

Gene Details

calpain 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000317214, Human)

Protein Percentage 94.07%
CDS Percentage 92.2%
Ka/Ks Ratio 0.11242 (Ka = 0.0297, Ks = 0.2638)

Capn6 ENSMUSG00000067276 (Mouse)

Gene Details

calpain 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084573, Mouse)

Protein Percentage 92.51%
CDS Percentage 88.25%
Ka/Ks Ratio 0.07791 (Ka = 0.0388, Ks = 0.4982)

Capn6 ENSRNOG00000004882 (Rat)

Gene Details

calpain 6 (Capn6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006638, Rat)

Protein Percentage 92.67%
CDS Percentage 88.51%
Ka/Ks Ratio 0.08115 (Ka = 0.0383, Ks = 0.472)

Genome Location

Sequence Coding sequence

Length: 1926 bp    Location: 4339423..4371797   Strand: +
>XM_004861429.1
ATGGGTCCTCCTCTGAAGCTCTTCAAAAATCAGAAGTACCATGAACTGAAGCAGGAGTGCATCAAAGACAGTAGACTTTTCTGTGATCCAACCTTTCTGCCTGAGAATGATTCTCTTTTTTACAACAGACTGCTTCCAGGAAAAGTGGTGTGGAAACGGCCCCAGGACATCTGCGATGACCCCCATCTGATTGTAGGCAACATCAGCCACCACCAGCTGATCCAGGGAAGACTGGGGCACAAGTTGATGGTTCCTGCATTTTCCTGTTTGGCTGTCCAGGAATCTCACTGGACAAAGACAATTCCCAATCATAAGGAACAGGAATGGGATCCTCGAAAACCAGATAAATATGCTGGAATATTTCGCTTTCGTTTCTGGCATTTTGGAGAATGGATCGAAGTGGTGATTGATGACTTGCTGCCCACCATCAATGGAGATCTGGTCTTCTCCTTCTCCACTTCCATGAATGAGTTTTGGAATGCTCTACTGGAAAAAGCTTATGCAAAGCTGCTAGGCTGTTATGAGGCCCTAGATGGTTTGACCATCACTGATATCATTGTGGACTTCACGGGCACATTGGCTGAAATTGTTGACATGCAGAAGGGAAGATACACTGAACTTGTTGAGGAGAAGTACAAGCTGTTCAGAGAACTGTACAAAACATTCACCAAAGGAGGTCTGATCTGCTGCTCCATTGAGTCTCCCAGTCAGGAAGAACAAGAAGTTGAAACTGATTGGGGCCTACTAAAGGGTAATACCTACACCATGACTGATATTCGCAAGATTCGTCTTAGAGAGAGACTTACAGAAGTCTTCAGTGCGGAGAAGCTGTACATGGTTCGCCTGAGGAACCCTTTGGGAAAACAGGAATGGAGTGGCCCCTGGAGTGAAATTTCTGAAGAATGGCAGCAGCTAACTTCAGCAGATCACAAGAACCTGGGGCTTGTTATGTGTGATGATGGAGAGTTTTGGATGAGCCTGGAAGACTTTTGCTGCAACTTTCACAAACTGAATGTCTGCCGTAATGTGAACAACCCTGTTTTGGGCCATAAGGAGCTACATTTGGTTCTGGGATGCTGGACTGTGGATGATGATCCGCTAATGAACCGCTCTGGAGGCTGCTATAACAACCGTGATACTTTCTTGCAGAATCCCCAGTACATCTTCACTGTGCCTGAGGATGGGCACAAGGTTATCATGTCACTGCAACAGAAGGACCTGCGCACTTATCGCAGAATGGGAAGACCTGACAATTACATCATTGGCTTTGAGCTTTTCAAGGTGGAGATGAATCGCAAATTCCGCCTCCACCATCTCTACATCCAGGAGCGTGCTGGAACTTCCACATATATTGATACCCGCACTGTGTTTCTGAGCAAGTACTTGAAGAAGGGCAACTATGTTCTGGTCCCTACCATGTTCCAACATGGCCGCACCAGCGAGTTTCTCCTGAGAATCTTCTCAGAAGTGCCTATTCAGCTCAGGGAACTGACTTTGGATATGCCCAAGATGTCCTGCTGGAACCTGGCTCGAGGGTACCCAAAGGTAGTTACCCAGATCACGATCCACAGTGCTGAGGGCCTGGAAAAGAAAAATGCCAATGAAACTGTAAACCCATATTTGGTCATCAAGTGTGGAAAGGAGGAAGTTCGTTCACCTGTCCAGAAGAATACTGTACATGCCATTTTTGATACCCAGGCCATTTTCTACAGAAGGACCACTGACATTCCTATTATAGTCCAGGTCTGGAACAGGCAAAAATTCTGTGATCACTTCTTGGGGCAGGTTACTCTGGATGCTAACCCCAGTGATTGCCATGAGCTGAAGTCTCTCTACCTGCGTAAAAAGGGTGGTCCAACTGCCAAAGTCAAGCAAGGCCACATCAGCTTCAAGGTTATTTCCAGTGATGATCTCACTGAGCTCTAA

Related Sequences

XP_004861486.1 Protein

Capn6 PREDICTED: calpain-6 [Heterocephalus glaber]

Length: 641 aa      View alignments
>XP_004861486.1
MGPPLKLFKNQKYHELKQECIKDSRLFCDPTFLPENDSLFYNRLLPGKVVWKRPQDICDDPHLIVGNISHHQLIQGRLGHKLMVPAFSCLAVQESHWTKTIPNHKEQEWDPRKPDKYAGIFRFRFWHFGEWIEVVIDDLLPTINGDLVFSFSTSMNEFWNALLEKAYAKLLGCYEALDGLTITDIIVDFTGTLAEIVDMQKGRYTELVEEKYKLFRELYKTFTKGGLICCSIESPSQEEQEVETDWGLLKGNTYTMTDIRKIRLRERLTEVFSAEKLYMVRLRNPLGKQEWSGPWSEISEEWQQLTSADHKNLGLVMCDDGEFWMSLEDFCCNFHKLNVCRNVNNPVLGHKELHLVLGCWTVDDDPLMNRSGGCYNNRDTFLQNPQYIFTVPEDGHKVIMSLQQKDLRTYRRMGRPDNYIIGFELFKVEMNRKFRLHHLYIQERAGTSTYIDTRTVFLSKYLKKGNYVLVPTMFQHGRTSEFLLRIFSEVPIQLRELTLDMPKMSCWNLARGYPKVVTQITIHSAEGLEKKNANETVNPYLVIKCGKEEVRSPVQKNTVHAIFDTQAIFYRRTTDIPIIVQVWNRQKFCDHFLGQVTLDANPSDCHELKSLYLRKKGGPTAKVKQGHISFKVISSDDLTEL