Details from NCBI annotation

Gene Symbol Apof
Gene Name apolipoprotein F
Entrez Gene ID 101719803

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

APOF ENSCPOG00000014939 (Guinea pig)

Gene Details

apolipoprotein F

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013463, Guinea pig)

Protein Percentage 76.47%
CDS Percentage 86.06%
Ka/Ks Ratio 0.63985 (Ka = 0.1377, Ks = 0.2152)

APOF ENSG00000175336 (Human)

Gene Details

apolipoprotein F

External Links

Gene Match (Ensembl Protein ID: ENSP00000381250, Human)

Protein Percentage 64.35%
CDS Percentage 78.34%
Ka/Ks Ratio 0.73732 (Ka = 0.2438, Ks = 0.3306)

Apof ENSMUSG00000047631 (Mouse)

Gene Details

apolipoprotein F

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050300, Mouse)

Protein Percentage 56.47%
CDS Percentage 68.66%
Ka/Ks Ratio 0.46391 (Ka = 0.3391, Ks = 0.7309)

Apof ENSRNOG00000033619 (Rat)

Gene Details

apolipoprotein F (Apof), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049259, Rat)

Protein Percentage 57.24%
CDS Percentage 67.76%
Ka/Ks Ratio 0.41308 (Ka = 0.3336, Ks = 0.8076)

Genome Location

Sequence Coding sequence

Length: 1182 bp    Location: 11641523..11644983   Strand: +
>XM_004861395.1
ATGACCCAGCCCAAATCACTGTGGTTTGTTTTGCTCTCCGTTGGTGGCTGCCTTTCTGGGAAGTGCCCAGAATGGGGCTCTCTTCCTCCAGCCGTCTCTCATGGAGACTGGGCCTCTGCCACACATGCTTGCCAGCCAGATCCAAGCACCTGCCAGGATCCCTTACACACGTTCCCCTCCTTACCCTTGCCTGAGTACATGTTCACAAGTCAGAGTGGCCTAGGAGGAGTGACTGGACTGTGTGGGTACTCTGTGCCAGACATGCGTAGCCTCAGGCTCATCATGATACCAGTTGGCCTTCTTTGCTACTTCCCGCTACACCCTGTGGATGCCATTCCATACAGAAAGCAGACAAATGCCTCAGCACCTCTTGTCTCAGCCTCGGGATCCCAACCACCCTCCTCATACCCCTTTTCCTGCGAAGCCCTGCTCCCGAAGTCCCTACCTGGCTTCACCCACATGGCCCTTCTGCCCAAGTTCCTGGTAGGGTTGGCTCTAAGGAATGCCCTGGAGGAAGCTGGCTGTCAGGCTGACTTCCGGGCCCTGGAGCTTCAGCTTTACCGCTGGGGTGGTCTGAACGCTACACGGGCTCTCATCCGCCACCTTCAAGGGCTCCAGAAAGGCAGAAGCACAGACAGCAGCAAGTCAGTAGAAGCCCTGGCCTCCGCTCTGCATCTGTTAGCCAGGGAGCACTCGAAGAGGATCCGGCGCTCCCCTACCAACAAGGACTGTGAGAACACGCGGGAGGAGAGCATATACAATGTCATCCGGGTGTTGCCAGGAGTGGGAACCTATTACAATCTGGGCACGGCTTTGTATTATGCGATTCAGAATTGCTCAGACAAGGCCAAGGAACGAGGTAAAGACGGTGCCATAGATCTGGGTTATGACCTTCTGCTAGCCATGGCAGGAATGTCAGGGGGGCCCATAGGTGTAGCGGTCAGTGCTTCACTTAAACCAGCATTGAAGGCTGGGGTAGAGCACTTGATCCGGTATTACTATGAAGAGAAAGCGGCAAGCACGCTTCAGCCAGCGACCAGCAGGGCTGGCTTGTGGACCACCTCCTACGTGAGTGACTCGGAAGAAACAATGACCACAGTTCCTCTCACATCCCAAGAAGCAAGTCCAGCTCCCTACTGGAAGTGGTCCTCATTCAACATCTATGGACATGTTGCGGTGTGA

Related Sequences

XP_004861452.1 Protein

Apof PREDICTED: apolipoprotein F [Heterocephalus glaber]

Length: 393 aa      View alignments
>XP_004861452.1
MTQPKSLWFVLLSVGGCLSGKCPEWGSLPPAVSHGDWASATHACQPDPSTCQDPLHTFPSLPLPEYMFTSQSGLGGVTGLCGYSVPDMRSLRLIMIPVGLLCYFPLHPVDAIPYRKQTNASAPLVSASGSQPPSSYPFSCEALLPKSLPGFTHMALLPKFLVGLALRNALEEAGCQADFRALELQLYRWGGLNATRALIRHLQGLQKGRSTDSSKSVEALASALHLLAREHSKRIRRSPTNKDCENTREESIYNVIRVLPGVGTYYNLGTALYYAIQNCSDKAKERGKDGAIDLGYDLLLAMAGMSGGPIGVAVSASLKPALKAGVEHLIRYYYEEKAASTLQPATSRAGLWTTSYVSDSEETMTTVPLTSQEASPAPYWKWSSFNIYGHVAV