Details from NCBI annotation

Gene Symbol Mmp19
Gene Name matrix metallopeptidase 19, transcript variant X1
Entrez Gene ID 101696939

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MMP19 ENSCPOG00000009116 (Guinea pig)

Gene Details

matrix metallopeptidase 19

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008187, Guinea pig)

Protein Percentage 87.26%
CDS Percentage 89.96%
Ka/Ks Ratio 0.37013 (Ka = 0.0759, Ks = 0.2052)

MMP19 ENSG00000123342 (Human)

Gene Details

matrix metallopeptidase 19

External Links

Gene Match (Ensembl Protein ID: ENSP00000313437, Human)

Protein Percentage 84.19%
CDS Percentage 86.96%
Ka/Ks Ratio 0.31626 (Ka = 0.0961, Ks = 0.304)

Mmp19 ENSMUSG00000025355 (Mouse)

Gene Details

matrix metallopeptidase 19

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026411, Mouse)

Protein Percentage 78.46%
CDS Percentage 81.47%
Ka/Ks Ratio 0.26195 (Ka = 0.133, Ks = 0.5078)

Mmp19 ENSRNOG00000006778 (Rat)

Gene Details

matrix metallopeptidase 19 (Mmp19), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008909, Rat)

Protein Percentage 80.39%
CDS Percentage 82.52%
Ka/Ks Ratio 0.24808 (Ka = 0.1211, Ks = 0.4882)

Genome Location

Sequence Coding sequence

Length: 1569 bp    Location: 12176416..12182128   Strand: +
>XM_004861364.1
ATGTGGTGGCAGCTGTGGCTGGGCTTCTTACTCCCCATGACAGTCTCAGGCCGGGCCCTGGGACCTGCAGAGGAGTCAGCTGTGGATTACCTGTTGCAGTATGGGTACCTGCAGAAGCCTCTAGAAGGACGTGATAACTTCAGGCCAGAAGATGTCACAGAGGCTCTGAGAGCTTTTCAGGAAGCATCTGAGCTGCCAGTCTCAGGTCAGCTGGATGATGCCACAAGGGCCCGCATGCGGCTGCCTCGTTGTGGCCTGGAGGACCCCTTCAACCAGAAGACCCTCAAATACCTATTGCTGGGGCGATGGAGAAAAAAGCACCTGACCTTCCGCATCTTGAACCTGCCCTCCACCCTCCCACCCCACACAGCCCGGGTGGCCCTGCTTCGAGCCTTCAAGTATTGGAGCAGTGTGACCCCCCTGACCTTTCGGGAGGTGCAAGCTGGCCGGGCTGACATCCGCCTTTCCTTCCATGGCCGCCAAAGCCCATACTGTTCCAATACTTTTGATGGGCCAGGGAGGGTGCTGGCCCATGCTGACATCCCTGAGCTGGGCAGTGTACACTTCGATGAAGATGAACTCTGGACCGAGGGGACCTATCGGGGGGTGAACCTGCGCATCATTGCTGCCCATGAACTGGGCCATGCCCTGGGACTTGGCCACTCCCGATACACCCAGGCACTCATGGCCCCTGTCTATGCTGGATACCGTCCCTACTTCGAGCTGCACTCAGATGACGTGGCAGGGATCCAAGCTCTCTACGGCAAGAAGAACCCAGAGACAAGGGATGAGGAAGAAGAGATGGAGGTGCCCACTGTACCCCCAGTGCCCAGAGAGCTCAGTCCCATGCCAAGCCCCTGCAGTGGTGAACTGGATGCCATGATGCTGGGGCCCCATGGGAAGACCTATGCTTTCAAGGGAGACTACGTGTGGACTGTGACAGATTCAGGGCTGGGCCCCTTGTTCTTAGTGTCTGACCTTTGGAATGGGCTTCCAGGAAAGCTGGATGCTGCTGTCTACTCTCCTCGAACACAGTGGATTCACTTCTTTAAGGGAGACAAGGTGTGGCGCTACATTAATTTCAAGATGTCTCCTGGTTTCCCCACGAAACTGAATAAGGTAGAACCCAACTTGGATGCAGCTCTCTATTGGCCTGTCAACCAAAAAGTGTTCCTCTTTAAGGGCTCTGGCTACTGGCAATGGGACGAGCTGGCCCCAAATGACTTCAGCCGCTACCCTAAACCAATCAAGGAGTTGTTTACTGGAGTGCCAAACCAGCCCTCGGCTGCCATGAGCTGGCGAGATGGCCGAGTCTACTTCTTCAAGGGTGTAAAGTACTGGCGCCTCAACAGGCAGCTTCGAGTAGAGAAAGGCTATCCAAGAAACACAGCCCACAACTGGATGCACTGTCACCCTCACACCCCAGGCACTACCTCATCAGCAGGGGACACCACTCCCTTGGCCATGGATACCAGCACCAATGCTGACACAGTCTTGGATGTCACTTCCTCAGCCACAGACTCCACCATGCTTTCACTACTTGCTAATGTCACCTTTCCGGAGGCCTAA

Related Sequences

XP_004861421.1 Protein

Mmp19 PREDICTED: matrix metalloproteinase-19 isoform X1 [Heterocephalus glaber]

Length: 522 aa      View alignments
>XP_004861421.1
MWWQLWLGFLLPMTVSGRALGPAEESAVDYLLQYGYLQKPLEGRDNFRPEDVTEALRAFQEASELPVSGQLDDATRARMRLPRCGLEDPFNQKTLKYLLLGRWRKKHLTFRILNLPSTLPPHTARVALLRAFKYWSSVTPLTFREVQAGRADIRLSFHGRQSPYCSNTFDGPGRVLAHADIPELGSVHFDEDELWTEGTYRGVNLRIIAAHELGHALGLGHSRYTQALMAPVYAGYRPYFELHSDDVAGIQALYGKKNPETRDEEEEMEVPTVPPVPRELSPMPSPCSGELDAMMLGPHGKTYAFKGDYVWTVTDSGLGPLFLVSDLWNGLPGKLDAAVYSPRTQWIHFFKGDKVWRYINFKMSPGFPTKLNKVEPNLDAALYWPVNQKVFLFKGSGYWQWDELAPNDFSRYPKPIKELFTGVPNQPSAAMSWRDGRVYFFKGVKYWRLNRQLRVEKGYPRNTAHNWMHCHPHTPGTTSSAGDTTPLAMDTSTNADTVLDVTSSATDSTMLSLLANVTFPEA