Details from NCBI annotation

Gene Symbol Pmel
Gene Name premelanosome protein, transcript variant X1
Entrez Gene ID 101724736

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PMEL ENSCPOG00000009940 (Guinea pig)

Gene Details

premelanosome protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008919, Guinea pig)

Protein Percentage 83.12%
CDS Percentage 89.33%
Ka/Ks Ratio 0.53573 (Ka = 0.0946, Ks = 0.1765)

PMEL ENSG00000185664 (Human)

Gene Details

premelanosome protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000402758, Human)

Protein Percentage 78.06%
CDS Percentage 84.92%
Ka/Ks Ratio 0.48768 (Ka = 0.1355, Ks = 0.2778)

Pmel ENSMUSG00000025359 (Mouse)

Gene Details

premelanosome protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051869, Mouse)

Protein Percentage 77.32%
CDS Percentage 81.9%
Ka/Ks Ratio 0.34776 (Ka = 0.1438, Ks = 0.4136)

Pmel ENSRNOG00000023085 (Rat)

Gene Details

premelanosome protein (Pmel), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048469, Rat)

Protein Percentage 78.95%
CDS Percentage 81.58%
Ka/Ks Ratio 0.2897 (Ka = 0.1367, Ks = 0.4719)

Genome Location

Sequence Coding sequence

Length: 1992 bp    Location: 12083426..12092865   Strand: +
>XM_004861355.1
ATGGATATGCTGCTGGCAAGGTGTCTTCTCCACTTGTCTGTGCTGAATGGTTTGTTGGTGGTGGGGATCACAGAAGGACCCAGAGACCAGGACTGGTTTGGTGTTTCAAGGCAGCTCCTAACTAAAGCGTGGAACAAGCAGCTGTATCCAGAATGGACAGGAGTCCAGGGGCCTGACTGCTGGAGAGGTGGCCAGGTGGCCCTAAAGGTCAGTAACGATGGGCCTACACTACTTGGTGCAAATGCCTCTTTCTCCATCATCCTGCAATTCCCGGAAAGCCAAAAGGTACTGCCAGATGGGCAGGTTGTCTGGGCCAACAACACCATCATTAATGGGAGCCAGATGTGGGGAGGACAACCAGTGTATCCCCAGGAACCTGATGATACTTGTATCTTCCCTGATGGTGGACCCTGCACATCTGGCCCTTGGTCTCAAAGAAGACGCTTTGTTTATGTCTGGAAGACCTGGGGCCAATACTGGCAAGTTCTGGGGGGCCCAGTGTCGAGACTGAGCATTGGGACAGGACAGGCAATGCTGGGCACACATACCATGGAAGTGACTGTCTACCACCGCCGGGGGGGCCGGAGCCATGTGCCCCTTGCTCATTCCAGCTCAGCCTTCACCATTACTGACCAGGTGCCTTTCTCTGTGAGCGTGTCCCAGCTGCAGGCCTTCAATGAAGGGAACAAGCACTTCCTGAGAAATCAACCTCTGACCTTTGCTCTTCAGCTCCATGACCCCAGTGGCTATTTGGCTGGGGCTGACCTCTCCTACACCTGGGACTTTGGAGATGGTACTGGGACACTGATATCTCGGGCACTTGTTGTCCCTCATACTTACCTGGAGTCTGGCCCAGTTACCCCCCAGGTGGTGCTGCAGGCTGCAATTCCTCTTACCACCTGTGGCTCTTCCCCAGTTCCAGGCACCACAGATGGGTACATGCCAACTACAGAGGCCTCTGGCACTACAGCTGGGCAAATGTCTACTGCAGAAGTTATGGGTACTACACCTGATCAGGTGCCAACTACAGAGCCTTCTAGAACTACAGCTCTGCAGGTGCCAACCACAGAGGCCATAAATACTGCCTCTGTATGGGTGCCAACCACAGAGGGCACAGGTACTACCCCTGAGCAGGTACCAACCTCAGAGGTCATAGGCACCACCCTAGCAAAGATGACAACCACAGAGGCTGTTGGCACAACACTGACAGAAGTGTCAAGTCGAGAGCCCTCTGAAACCACGCTTGCACAGGCAACAGTTACAAAGTTGGTGGAGACCACAGCTGGAGAGTTACCCACCCTTGAGCCTGAGGATCCAGGTGCCAGGCCATTCACGCCCTCAGAAGGCATTTCTGCGTCCCCAAGCTCCCTGCTGAATGGTACAGACACCTTAACACTGGTGAAGAGACAAGTCCCGCTGGATTGTGTTCTGTATCGATATGGTTCCTTTTCCCTCACCCTGGACATTATCCAGGGCATTGAAAATGCAGAGATCTTGCAGGCTGTGCCATCCAGTGAGGGTGATGCATTTGAGCTAACTGTGTCCTGCCAAGGCAGGGTGCCTGAGGAAGCCTGTGTGGACATTTCATCACCTGGGTGCCTACCCCCTACCCAGCGGCTGTGCCGGCATGTGCCACCAAGCCCAGCCTGCCAGCTGGTTCTGCACCAAGTATTAAAGGGTGGCTCAGGGACCTACTGCCTCAATGTATCTTTGGCTGATGCCAACAGCCTGGCAGTAGCCAGCACCCAGATTGTCATGCCTGGTCAAGAAGCAGGTCTTGGGCAGGCTCCTCTGCTTGTGGGCATCTTGCTGGTGTTGGTGGCCGTGGTGCTTGCATCTCTGATATACAGGCACAGGCTGATGAAGCAGGGCTCAGCCCGCTCCATTTCCCAGCTGCCACATGGTAGCACCCACTGGCTGCGACTGCCCCAAGTTTTCCGCACTTGTCCCATTGGTGAGAACAGCCCACTCCTCAATGGGCAGCAGGTCTAG

Related Sequences

XP_004861412.1 Protein

Pmel PREDICTED: melanocyte protein PMEL isoform X1 [Heterocephalus glaber]

Length: 663 aa      View alignments
>XP_004861412.1
MDMLLARCLLHLSVLNGLLVVGITEGPRDQDWFGVSRQLLTKAWNKQLYPEWTGVQGPDCWRGGQVALKVSNDGPTLLGANASFSIILQFPESQKVLPDGQVVWANNTIINGSQMWGGQPVYPQEPDDTCIFPDGGPCTSGPWSQRRRFVYVWKTWGQYWQVLGGPVSRLSIGTGQAMLGTHTMEVTVYHRRGGRSHVPLAHSSSAFTITDQVPFSVSVSQLQAFNEGNKHFLRNQPLTFALQLHDPSGYLAGADLSYTWDFGDGTGTLISRALVVPHTYLESGPVTPQVVLQAAIPLTTCGSSPVPGTTDGYMPTTEASGTTAGQMSTAEVMGTTPDQVPTTEPSRTTALQVPTTEAINTASVWVPTTEGTGTTPEQVPTSEVIGTTLAKMTTTEAVGTTLTEVSSREPSETTLAQATVTKLVETTAGELPTLEPEDPGARPFTPSEGISASPSSLLNGTDTLTLVKRQVPLDCVLYRYGSFSLTLDIIQGIENAEILQAVPSSEGDAFELTVSCQGRVPEEACVDISSPGCLPPTQRLCRHVPPSPACQLVLHQVLKGGSGTYCLNVSLADANSLAVASTQIVMPGQEAGLGQAPLLVGILLVLVAVVLASLIYRHRLMKQGSARSISQLPHGSTHWLRLPQVFRTCPIGENSPLLNGQQV