Details from NCBI annotation

Gene Symbol Atp5b
Gene Name ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide, transcript variant X2
Entrez Gene ID 101701683

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ENSCPOG00000020051 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015536, Guinea pig)

Protein Percentage 66.23%
CDS Percentage 78.43%
Ka/Ks Ratio 0.66249 (Ka = 0.2362, Ks = 0.3565)

ATP5B ENSG00000110955 (Human)

Gene Details

ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide

External Links

Gene Match (Ensembl Protein ID: ENSP00000262030, Human)

Protein Percentage 97.54%
CDS Percentage 92.19%
Ka/Ks Ratio 0.04031 (Ka = 0.012, Ks = 0.2976)

Atp5b ENSMUSG00000025393 (Mouse)

Gene Details

ATP synthase, H+ transporting mitochondrial F1 complex, beta subunit

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026459, Mouse)

Protein Percentage 96.98%
CDS Percentage 89.04%
Ka/Ks Ratio 0.03049 (Ka = 0.0148, Ks = 0.484)

Atp5b ENSRNOG00000002840 (Rat)

Gene Details

ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide (Atp5b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003965, Rat)

Protein Percentage 96.79%
CDS Percentage 88.91%
Ka/Ks Ratio 0.03167 (Ka = 0.0157, Ks = 0.4948)

Genome Location

Sequence Coding sequence

Length: 1590 bp    Location: 11400311..11408785   Strand: +
>XM_004861278.1
ATGTTGAGTCTTGTGGGACGTGTGGCCGCTGCATCGGCCTCCGGGGCCTTGAGGGGGCTCAGCTCTTCGGCTTCGCTACCCCAAGCTCAGCTTTTACTGCGGGCCGCCCCGGCAGCGGTGCAGCCTGCCAGAGACTATGCGGCGCAGACGTCCCCGTCGCCCAAGTCAGGGGCAGCCACCGGGCGCATCGTGGCAGTCATCGGTGCGGTGGTGGATGTCCAGTTTGATGAAGGATTACCACCCATCCTAAATGCCTTGGAAGTGCAAGGCAGGGAGACCCGACTGGTTTTGGAGGTGGCTCAGCATTTGGGTGAGAGCACGGTAAGAACCATTGCTATGGATGGTACAGAAGGCCTGGTCAGAGGCCAGAAAGTCCTGGATTCTGGTGCACCAATCAAAATTCCTGTTGGTCCTGAGACCTTGGGCAGAATCATGAATGTCATTGGAGAGCCTATTGATGAGAGAGGGCCTATCAAAACCAAACAATTTGCTCCTATTCATGCTGAGGCTCCTGAGTTCATGGAGATGAGTGTTGAGCAGGAAATTCTGGTTACTGGGATCAAGGTTGTGGATCTGCTAGCTCCCTATGCCAAAGGTGGCAAAATTGGGCTCTTTGGAGGTGCTGGAGTTGGCAAGACAGTATTGATCATGGAACTAATCAACAATGTTGCCAAAGCCCATGGTGGTTACTCTGTGTTTGCTGGTGTTGGTGAGAGGACCCGTGAGGGCAATGACTTATACCATGAAATGATTGAATCTGGTGTAATCAACTTAAAAGATGCTACCTCAAAGGTAGCATTGGTGTATGGTCAAATGAATGAACCACCTGGTGCTCGTGCCCGGGTAGCCTTGACTGGACTGACTGTGGCTGAATATTTTAGAGACCAAGAAGGTCAAGATGTACTGCTATTCATCGATAACATCTTTCGGTTCACCCAGGCTGGTTCAGAGGTGTCTGCCTTACTGGGCAGAATTCCTTCTGCTGTAGGCTATCAGCCTACACTGGCCACTGACATGGGTACTATGCAGGAAAGAATAACCACCACCAAGAAAGGATCTATCACCTCTGTACAGGCTATCTATGTGCCTGCTGACGACTTGACTGACCCTGCCCCTGCCACTACATTTGCCCATTTGGATGCCACCACTGTGCTGTCCCGTGCCATTGCTGAGCTGGGTATTTATCCAGCTGTGGATCCTCTGGATTCCACCTCTCGAATCATGGATCCTAACATTGTTGGCAGTGAGCATTATGATGTTGCCCGTGGGGTACAGAAGATCCTTCAGGACTACAAATCCCTCCAGGACATCATTGCCATCTTGGGTATGGATGAACTTTCTGAAGAAGACAAGTTGACTGTATCCCGGGCACGGAAAATACAGCGTTTCTTGTCTCAGCCATTCCAGGTTGCTGAGGTCTTCACAGGGCATATGGGGAAGCTGGTACCCCTGAAGGAGACCATCAAAGGATTCCAGCAGATTTTGGCAGGTGACTATGACCATCTCCCAGAACAGGCCTTCTACATGGTGGGACCCATTGAAGAAGCTGTGGCAAAAGCTGATAAACTGGCGGAAGAGCATGCATCATGA

Related Sequences

XP_004861335.1 Protein

Atp5b PREDICTED: ATP synthase subunit beta, mitochondrial isoform X2 [Heterocephalus glaber]

Length: 529 aa     
>XP_004861335.1
MLSLVGRVAAASASGALRGLSSSASLPQAQLLLRAAPAAVQPARDYAAQTSPSPKSGAATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFMEMSVEQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINLKDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHMGKLVPLKETIKGFQQILAGDYDHLPEQAFYMVGPIEEAVAKADKLAEEHAS