Details from NCBI annotation

Gene Symbol Hmga2
Gene Name high mobility group AT-hook 2, transcript variant X2
Entrez Gene ID 101706197

Database interlinks

Part of NW_004624802.1 (Scaffold)

For more information consult the page for NW_004624802.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HMGA2 ENSCPOG00000013133 (Guinea pig)

Gene Details

high mobility group AT-hook 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011822, Guinea pig)

Protein Percentage 68.57%
CDS Percentage 74.29%
Ka/Ks Ratio 0.6312 (Ka = 0.2947, Ks = 0.4668)

HMGA2 ENSG00000149948 (Human)

Gene Details

high mobility group AT-hook 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000384026, Human)

Protein Percentage 100.0%
CDS Percentage 94.58%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1868)

Hmga2 ENSMUSG00000056758 (Mouse)

Gene Details

high mobility group AT-hook 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072556, Mouse)

Protein Percentage 96.2%
CDS Percentage 94.51%
Ka/Ks Ratio 0.13847 (Ka = 0.0197, Ks = 0.1426)

Hmga2 ENSRNOG00000042460 (Rat)

Gene Details

high mobility group AT-hook 2 (Hmga2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061041, Rat)

Protein Percentage 93.59%
CDS Percentage 91.45%
Ka/Ks Ratio 0.15416 (Ka = 0.0349, Ks = 0.2262)

Genome Location

Sequence Coding sequence

Length: 243 bp    Location: 2468773..2337353   Strand: -
>XM_004861104.1
ATGAGCGCACGCGGTGAAGGAGCCGGGCAGCCGTCCACTTCAGCCCAGGGACAACCTGCCGCCCCGGCGCCTCAGAAGCGAGGACGCGGCCGGCCCAGGAAGCAGCAGCAAAAAGCAGAAGCCACTGGAGAAAAACGACCAAGAGGCAGACCTAGGAAATGGCCACAACAAGTCGTTCAGAAGAAGCCTGCTCAGGAGGAGACTGAAGAGACATCCTCACAAGAATCCGCCGAGGAGGATTAG

Related Sequences

XP_004861161.1 Protein

Hmga2 PREDICTED: high mobility group protein HMGI-C isoform X2 [Heterocephalus glaber]

Length: 80 aa      View alignments
>XP_004861161.1
MSARGEGAGQPSTSAQGQPAAPAPQKRGRGRPRKQQQKAEATGEKRPRGRPRKWPQQVVQKKPAQEETEETSSQESAEED