Sequence details NCBI ID: XM_004861078.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tspan10
Gene Name tetraspanin 10
Entrez Gene ID 101726222

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSPAN10 ENSCPOG00000022223 (Guinea pig)

Gene Details

tetraspanin 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019826, Guinea pig)

Protein Percentage 81.82%
CDS Percentage 85.05%
Ka/Ks Ratio 0.29098 (Ka = 0.1111, Ks = 0.3819)

TSPAN10 ENSG00000182612 (Human)

Gene Details

tetraspanin 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000331620, Human)

Protein Percentage 71.12%
CDS Percentage 78.01%
Ka/Ks Ratio 0.2524 (Ka = 0.1853, Ks = 0.7343)

Tspan10 ENSMUSG00000039691 (Mouse)

Gene Details

tetraspanin 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000041883, Mouse)

Protein Percentage 66.87%
CDS Percentage 74.16%
Ka/Ks Ratio 0.3083 (Ka = 0.2358, Ks = 0.7649)

Tspan10 ENSRNOG00000046076 (Rat)

Gene Details

Protein LOC688308

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065934, Rat)

Protein Percentage 67.68%
CDS Percentage 74.49%
Ka/Ks Ratio 0.30566 (Ka = 0.2322, Ks = 0.7596)

Genome Location

Sequence Coding sequence

Length: 993 bp    Location: 10592065..10596670   Strand: +
Raw sequence   
>XM_004861078.1
ATGGAGGAGGGGGAATGGAGCCCCTTGCTGCCGAAGGATGCTGTAGGCCAGGGGCCGCCCCTCTCCATGGACAGCCCAGCCACACCAAACCACTTAGGTCCAGCACCTGGGGGAGACAAGTTTGGGATCTGGATCTGCTGCTGCTGTGCTCCTGGAGCCAAGCACCAGGCCTGGAGGGAAGGCCCTGCTGCCTCCCTCCCCATGGGGACCAGCTGCATCAAGTGTCTGATCTTCCTCTCCAACTTCCTCTTCTCCCTGCTGGGCCTGCTGGCCCTGGCCGTAGGGCTCTGGGGCCTGGCTGTCAAAGGGTCTCTGGGAAGTAGTTTGGGAACAGTCCTGCCACCAGACCCCATGCTGGGGCTGGTGCTTGGTGGGCTAGTGGTCAGCATCGTGAGTCTGGCCGGCTGCCTGGGAGCCCTCTGTGAGAGCAGTAGCCTCCTTCGCTGCTTCTGCGGGGCCATCCTCGGCCTCCTGGTGCTTGAGGCGCTTGCAGGGGCCCTGTTAGTGGCCCTCTGGGGTTCCCTACAGGATGCCCTGGAGCACACCTTGCAAGTAGCCATCATCCACTACCAGGATGACCCAGACCTGCACTTCCTCCTTGACCAAGTCCAGCTGGGGCTGCAGTGCTGCGGGACAGTGTCCTACCAGGACTGGCAGCAGAACCTGTACTTCAACTGCAGCTCTCCAGGGGTGCAGGCCTGCAGCCTTCCTGCCTCTTGCTGTATCAACCCTCAGGAAGATGGAGCCTCAGCGAACACCCAGTGCGGTTTCGGGGTACTACGCCTGGATCAGGTGGCAGCAGGGCAAGTCGTATACCTGGAGGGCTGCAGCCCCAGGCTGCAGCAGTGGATGCTTGGGAACATCCAGACCATGGGTGGCTGTGCCATTGGCATTGTGCTAGTCCAGGGGGCTGAGCTCCTGCTGGCCACCCTGCTGCTGAGGACCCTAGCTGCCCAAAAGGTAGCAGAGGACCCTGGCCCAGGCCCTCCCTGA

Related Sequences

XP_004861135.1 Protein

Tspan10 PREDICTED: tetraspanin-10 [Heterocephalus glaber]

Length: 330 aa      
>XP_004861135.1
MEEGEWSPLLPKDAVGQGPPLSMDSPATPNHLGPAPGGDKFGIWICCCCAPGAKHQAWREGPAASLPMGTSCIKCLIFLSNFLFSLLGLLALAVGLWGLAVKGSLGSSLGTVLPPDPMLGLVLGGLVVSIVSLAGCLGALCESSSLLRCFCGAILGLLVLEALAGALLVALWGSLQDALEHTLQVAIIHYQDDPDLHFLLDQVQLGLQCCGTVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGASANTQCGFGVLRLDQVAAGQVVYLEGCSPRLQQWMLGNIQTMGGCAIGIVLVQGAELLLATLLLRTLAAQKVAEDPGPGPP