Sequence details NCBI ID: XM_004861025.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc57
Gene Name coiled-coil domain containing 57, transcript variant X5
Entrez Gene ID 101700240

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC57 ENSCPOG00000010590 (Guinea pig)

Gene Details

coiled-coil domain containing 57

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009510, Guinea pig)

Protein Percentage 68.31%
CDS Percentage 76.8%
Ka/Ks Ratio 0.29207 (Ka = 0.2223, Ks = 0.7612)

CCDC57 ENSG00000176155 (Human)

Gene Details

coiled-coil domain containing 57

External Links

Gene Match (Ensembl Protein ID: ENSP00000376154, Human)

Protein Percentage 70.67%
CDS Percentage 77.44%
Ka/Ks Ratio 0.16377 (Ka = 0.1923, Ks = 1.174)

Ccdc57 ENSMUSG00000048445 (Mouse)

Gene Details

coiled-coil domain containing 57

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050996, Mouse)

Protein Percentage 63.96%
CDS Percentage 72.05%
Ka/Ks Ratio 0.19822 (Ka = 0.2682, Ks = 1.3532)

Ccdc57 ENSRNOG00000047531 (Rat)

Gene Details

coiled-coil domain containing 57

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066112, Rat)

Protein Percentage 61.88%
CDS Percentage 68.67%
Ka/Ks Ratio 0.15739 (Ka = 0.3164, Ks = 2.0102)

Genome Location

Sequence Coding sequence

Length: 2778 bp    Location: 11011741..10950928   Strand: -
Raw sequence   
>XM_004861025.1
ATGGCAACGAGGCCCGGGAAGCAGCAGGGCTGGCAATGGAGGGAGGAGCGCGAGGGGTGTCGTGGGCCCGCGTGGGGTCGCTCGGGTCGCCATTCCTCTGAAGACTGGAGACCCTCAGGCCCCATCGGACTCCTCGCTGTCGGGGGACCTGGGGACGCGGTGGACCCCGGCGGTTCCTGGCCTGGAATCGTGAGCGCTGCCACCATGCTGAGCTCTGAGCAGGCCCTGAACAAGCTGCTGATGCGCAAGGAGCAGGAGTGGCGTGTGCTGCAGGCCCAGCGGAGCCAGCTGCAGGAGACAGCTCTGCAGGACACTCAGCGCCAGCTGGAGGAGGCAAGGGAGAAGTTACGGCGCCTTCAGGAGGACTTCGTTTACAACCTACAGGTGCTGGAGGAGCGGGACCGTGAGCTGGAGCGCTATGACGCTGCGTTTGCCCAGGCCAGGGCCCAGGAGGAGGCCAGGCAGGCAGAGGTGAGCGAGCTCAAGATAGAGGTGGCCAAGCTGAAGCAGGAGCTCGCCAGAGAGGCCAGACGTGTGGAGGAGCTGCAGGAGCAGCTGCGGCTCAGGTTGCAGGAGCATCGCCTGGAGCTGGGCCGCATCCAGAGTGACAAGAACGGCGAGATCGACCACCAGCGGGAGCAGTACGAGAACCTGAAGTGGAGGCTGGAGAGGACGCTCGAGGAACTCGATGGCGAACTTGCTCTGCAGAGACAGGAGCTGCTGCTGGAGTTTGAATCCAAGATGCAGAAGAAGGAGCATGAGTTCCGCCTGCAGGCCGACAGCATGAGCAGCACAGTCTTGGCCCATGAGCTCAAGGTTAAACTACTGAGCAAAGAGCTGGAGGCACTGAGGGCCGCGGGAGCTCAGGCGGCCGAGTGCCTGCAGAGAGCAGAGGCAGCGAACGCCAAGCTAGAGCAGAAGCTGGAGGGCTGCGGCTGGGAGCTCCGGGACCTGGAAGCCGTGAAGGACGCCCGGATAAAGGACCTAGAGGCGACACTTCACTCTGCACAGCTGGCCAGGAAGAAAGACGAGGAGACGTTCACCAGGAAACACGAGGAGCTTGACCGTCTGGCCAGAGAGAGAGACGCCGCGCTGGTGGCGGTGAAGGGCGCCCACGCGGAGCAGCTTCGGGCGTCGCAGGCCAGGCTGCAGGAACTCCAGGCCCACTGCGAGAGCCTCGACGGGCAGCTGCGCAGGGCCGAGTGGGCTCAGGCGGATGCCGCCAGGGAGAAGGACGCCGTCATTGCCAGGCTCCGCGACGAGGCAGCCGCTCTGCAAGCTGGCTGGGATGCACAGGTCGCGCAGATGTCCAGGGAGGTGGTCTCCAGTGGCCTGCAGGCCCAGGCACTGCGGGAGGAGGAGGTGAAGCTCAAGGCGCAGCTGGCCAGAGCCCAGCAGGACGTGGACAGGTACAAACAGCAGCTGTCCCAGGCTGTTGAGAGGGAACGGAGCCTGGAGCGTGACCAGGTGCAGCTGGGTCTGGACTGGCAGCGCCGCTGTGACGACATCGAGAGGGACCAGATCCAGAGGTCAGAGGCCTTGATCCAGGGGCTGATGGAGGCCAGAGATCAGGTCACCGCCAAGCTTCAGGAGACAGAGCAGGCGCTGCGGGAGCAGGAGGTGGTGCTGCGGGCTGTGACCCTGGAGCGAGACCAGGCCGTGCAGGGGCTGCGGGCACACGGGCCCCTCCCCAGGCTGGAGCCACAGACGCCCCCACAGCAGCACAGAGAAGAAGTTGGTAAAGATTTTCCGTCTAGGGAGATCCAGCGGCTGCAAGAGCAGAACAGCAGCCTGCGGAGCACCGTCGCACAGATGAGGCGGGAGATGGAAACGCTGAGTGACCAGATGCTGCCTCCCCCACAGTTAGCAAGGGACACCTCGGAGGCCGAGCGGCCCGGTCCTGATCCCGATCCCCAGGCTGCGGGAGATGCAGCCCCTCCTGATTTTGTTCTGGCCCTCGAAGCAGAAATGCAAGACCTAAAGCACAAACTGAAAGGCCTGGAAGCGCAGCTGGAAGGCGCGCGGGAGCCTCCGAGGACGCCCTCCAGCCATGCCGACCCCCAGCCCAGTGCCTGCTGCTCCGCAGAGGCTGCCGGAGACTCTGTCTGTGTTGACCAGGCATCCCCTGGACTGGTGCTCAGGAAGCTTGGAGACAGAGTGCATCTCTTGACCTTGCTGGTAACGAAGCTCAAAAAGAAGGTGCAGCAGCAGCCCTTGGAGCTGGACACTGTGCAGCAGGAGCTTCCCCCAGAAGTGGACCAGGTGCACCTGGAAGTTCTGGAGCTGCAGAAGCAGGTGGCTGAGCTGCAGAAGTACCTTGGGACAGCTCGGCCGAAAGGAGGGGAGCCCTCAGACAGGAAGTTGCTCCAGAAAGAGGGCCTCGCAGATGGGACACCCGTGGGGACTGAGGACCAGGAGCAGTTTTCCAGACACCCACAGCGGAGAACACAGCGCCCCCAGGCCTCATCTGTGCCCCACCTGCAGAGGAAACTAAAGGAAGCTTCCAGAAAGATCCTCAGCCTCCACCTGCAGAGGGAGCAGCTCATCGAGATGGGGAACCGGCTGCGTGCTGAGCTGGGCCGTCCCAGAGGACCTGAAGCGCCCCACGAGAGAGCAGGGCCCTGGACACGGGAGAAGGAGCCAGCCCCGCTCAGCACAGCCCGCAGGCAGAAACCCCGCCCCAAGAGGCTCCCAGGCAGGCCGGCTGGTGGGGCCCACGCAGAGGCAACACAGGACCCCCACGGTGACCTGCAGATCCACCCAGCAGAAAGAAAATAG

Related Sequences

XP_004861082.1 Protein

Ccdc57 PREDICTED: coiled-coil domain-containing protein 57 isoform X5 [Heterocephalus glaber]

Length: 925 aa      View alignments
>XP_004861082.1
MATRPGKQQGWQWREEREGCRGPAWGRSGRHSSEDWRPSGPIGLLAVGGPGDAVDPGGSWPGIVSAATMLSSEQALNKLLMRKEQEWRVLQAQRSQLQETALQDTQRQLEEAREKLRRLQEDFVYNLQVLEERDRELERYDAAFAQARAQEEARQAEVSELKIEVAKLKQELAREARRVEELQEQLRLRLQEHRLELGRIQSDKNGEIDHQREQYENLKWRLERTLEELDGELALQRQELLLEFESKMQKKEHEFRLQADSMSSTVLAHELKVKLLSKELEALRAAGAQAAECLQRAEAANAKLEQKLEGCGWELRDLEAVKDARIKDLEATLHSAQLARKKDEETFTRKHEELDRLARERDAALVAVKGAHAEQLRASQARLQELQAHCESLDGQLRRAEWAQADAAREKDAVIARLRDEAAALQAGWDAQVAQMSREVVSSGLQAQALREEEVKLKAQLARAQQDVDRYKQQLSQAVERERSLERDQVQLGLDWQRRCDDIERDQIQRSEALIQGLMEARDQVTAKLQETEQALREQEVVLRAVTLERDQAVQGLRAHGPLPRLEPQTPPQQHREEVGKDFPSREIQRLQEQNSSLRSTVAQMRREMETLSDQMLPPPQLARDTSEAERPGPDPDPQAAGDAAPPDFVLALEAEMQDLKHKLKGLEAQLEGAREPPRTPSSHADPQPSACCSAEAAGDSVCVDQASPGLVLRKLGDRVHLLTLLVTKLKKKVQQQPLELDTVQQELPPEVDQVHLEVLELQKQVAELQKYLGTARPKGGEPSDRKLLQKEGLADGTPVGTEDQEQFSRHPQRRTQRPQASSVPHLQRKLKEASRKILSLHLQREQLIEMGNRLRAELGRPRGPEAPHERAGPWTREKEPAPLSTARRQKPRPKRLPGRPAGGAHAEATQDPHGDLQIHPAERK