Details from NCBI annotation

Gene Symbol Alyref
Gene Name Aly/REF export factor, transcript variant X2
Entrez Gene ID 101714006

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ALYREF ENSCPOG00000013710 (Guinea pig)

Gene Details

Aly/REF export factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012347, Guinea pig)

Protein Percentage 87.35%
CDS Percentage 80.27%
Ka/Ks Ratio 0.13757 (Ka = 0.1047, Ks = 0.7611)

ALYREF ENSG00000183684 (Human)

Gene Details

Aly/REF export factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000421592, Human)

Protein Percentage 95.31%
CDS Percentage 89.32%
Ka/Ks Ratio 0.05393 (Ka = 0.0246, Ks = 0.4554)

Alyref ENSRNOG00000036687 (Rat)

Gene Details

Aly/REF export factor (Alyref), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000051838, Rat)

Protein Percentage 89.89%
CDS Percentage 84.4%
Ka/Ks Ratio 0.10227 (Ka = 0.067, Ks = 0.6551)

Genome Location

Sequence Coding sequence

Length: 771 bp    Location: 10738124..10734392   Strand: -
>XM_004860967.1
ATGGCCGACAAAATGGATATGTCCCTGGACGACATCATTAAACTGAACCGGAGCCAGCGGGGCGGCCGCGGCGGGGGTCGTGGCCGCGGCAGGGCCGGCTCCCAGGGTGGCCGCGGCGGTGGGGCTCAGGCCACCGCTCGGGTGAATCGAGGCGGCGGGCCCATGAGGAATCGGCCGGCCCTCGCCCGCGGCGCGGCGGGCGGCGGCAGGAACCGGCCGGCGCCTTACAGCAGGCCGAAGCAACTTCCCGACAAGTGGCAGCACGACCTTTTCGACAGCGGCTTTGGAGGCGGTGCCGGCGTGGAGACAGGGGGAAAGCTGTTAGTGTCAAACCTGGACTTCGGAGTGTCAGACGCAGATATTCAGGAACTCTTTGCTGAATTTGGAACACTGAAGAAGGCGGCTGTGCACTATGATCGCTCTGGACGAAGTTTAGGAACAGCAGATGTGCACTTTGAACGGAAGGCAGATGCCCTGAAGGCTATGAAGCAGTACAACGGGGTCCCTCTGGATGGCCGCCCCATGAACATCCAGCTCGTCACGTCACAGATAGAGACACAGCGGAGACCTGCACCGAGCATCAACAGAGGTGGCATGACCAGAAACCGCGGCTCTGGAGGCTTTGGCGGCGGCGGTGGTGCCCGGAGAGGAACCCGCGGAGGCAGCCGGGGACGAGGCAGAGGCACTGGCAGGAGCTCAAAGCAGCAGCTTTCGGCCGAGGAGCTGGACGCACAGCTGGACGCTTACAATGCGAGGATGGACACCAGCTAA

Related Sequences

XP_004861024.1 Protein

Alyref PREDICTED: THO complex subunit 4 isoform X2 [Heterocephalus glaber]

Length: 256 aa     
>XP_004861024.1
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQATARVNRGGGPMRNRPALARGAAGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIETQRRPAPSINRGGMTRNRGSGGFGGGGGARRGTRGGSRGRGRGTGRSSKQQLSAEELDAQLDAYNARMDTS