Details from NCBI annotation

Gene Symbol Chmp6
Gene Name charged multivesicular body protein 6, transcript variant X1
Entrez Gene ID 101725742

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHMP6 ENSCPOG00000008245 (Guinea pig)

Gene Details

charged multivesicular body protein 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007412, Guinea pig)

Protein Percentage 98.51%
CDS Percentage 94.36%
Ka/Ks Ratio 0.0205 (Ka = 0.0066, Ks = 0.321)

CHMP6 ENSG00000176108 (Human)

Gene Details

charged multivesicular body protein 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000317468, Human)

Protein Percentage 93.53%
CDS Percentage 90.38%
Ka/Ks Ratio 0.04318 (Ka = 0.0295, Ks = 0.6834)

Chmp6 ENSMUSG00000025371 (Mouse)

Gene Details

charged multivesicular body protein 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026434, Mouse)

Protein Percentage 94.0%
CDS Percentage 89.0%
Ka/Ks Ratio 0.02816 (Ka = 0.0256, Ks = 0.9078)

Chmp6 ENSRNOG00000004014 (Rat)

Gene Details

charged multivesicular body protein 6 (Chmp6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005379, Rat)

Protein Percentage 95.5%
CDS Percentage 88.33%
Ka/Ks Ratio 0.0201 (Ka = 0.0214, Ks = 1.066)

Genome Location

Sequence Coding sequence

Length: 606 bp    Location: 10063540..10070315   Strand: +
>XM_004860902.1
ATGGGCAATCTGTTCGGCCGCAAGAAGCAGAGCCGGGTCACCGAACAAGACAAGGCCATCCTGCAACTGAAGCAGCAGCGGGACAAGCTGAAGCAGTACCAGAAGAGGGTCACACAGCAGCTGGAGCGTGAGCGGGCACTGGCGAGGCAGCTGCTGCGGGACGGCAGGAAGGAACGGGCCAAGCTGCTGCTCAAGAAGAAGCGGTACCGGGAGCAGCTCCTGGACCGAACAGAGAACCAGATCAGCAGCCTGGAGGCCATGGTTCAGAGCATTGAGTTCACCCAGATCGAGATGAAGGTGATGGAGGGGCTGCAGGTGGGAAACGAGTGTCTGAACAAGATGCATCAGGTGATGTCTATTGAGGAAGTGGAGAGGATCCTAGACGAGACGCAGGAAGCTGTGGAGTACCAGAGGCAAATAGATGAGCTGTTGGCCGGAAGCTTCACACAGGAGGATGAGGACGCCATCCTGGAGGAGCTGAACGCGATCACTCAGGAACAAATAGAGCTCCCAGAGGCTCCTTCAGAGCCCCTTCCTGAGACACATCCAGAAAAAGCCCCTGTCAAGGTCAGGCCCAGGCAGGCAGACCTGGTGGCAGCCTCCTAA

Related Sequences

XP_004860959.1 Protein

Chmp6 PREDICTED: charged multivesicular body protein 6 isoform X1 [Heterocephalus glaber]

Length: 201 aa      View alignments
>XP_004860959.1
MGNLFGRKKQSRVTEQDKAILQLKQQRDKLKQYQKRVTQQLERERALARQLLRDGRKERAKLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELNAITQEQIELPEAPSEPLPETHPEKAPVKVRPRQADLVAAS