Details from NCBI annotation

Gene Symbol Rbfox3
Gene Name RNA binding protein, fox-1 homolog (C. elegans) 3, transcript variant X5
Entrez Gene ID 101711607

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBFOX3 ENSCPOG00000021703 (Guinea pig)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016934, Guinea pig)

Protein Percentage 93.35%
CDS Percentage 90.74%
Ka/Ks Ratio 0.13218 (Ka = 0.0413, Ks = 0.3123)

RBFOX3 ENSG00000167281 (Human)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000408395, Human)

Protein Percentage 98.08%
CDS Percentage 93.27%
Ka/Ks Ratio 0.02864 (Ka = 0.0088, Ks = 0.3077)

Rbfox3 ENSMUSG00000025576 (Mouse)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017576, Mouse)

Protein Percentage 95.99%
CDS Percentage 90.37%
Ka/Ks Ratio 0.05236 (Ka = 0.0201, Ks = 0.3839)

Rbfox3 ENSRNOG00000003386 (Rat)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 3 (Rbfox3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004524, Rat)

Protein Percentage 96.8%
CDS Percentage 90.93%
Ka/Ks Ratio 0.0444 (Ka = 0.016, Ks = 0.3614)

Genome Location

Sequence Coding sequence

Length: 1137 bp    Location: 8519546..8404514   Strand: -
>XM_004860856.1
ATGGCCCAGCCCTACCCCCCTGCCCAGTACCCCCCTCCGCCTCAGAACGGCATCCCTACCGAGTACGCCCCGCCCCCGCCGCACCCCACGCAGGACTACTCGGGCCAGACCCCTGTCGCCCCAGAGCACGGCATGACCCTGTACACACCAGCACAGACCCGCCCCGAACAGCCGGGCGCCGAGGCCAGCACACAGCCCATCGCCGGGACCCAGACAGTGCCGCAGACAGATGAGGCGGCGCAGACGGACAGCCAGCCACTCCACCCCTCCGACCCCACAGAGAAGCAGCAGCCCAAGCGGCTGCACGTCTCCAACATCCCCTTCCGGTTCAGGGACCCCGACCTACGGCAAATGTTCGGGCAATTTGGAAAGATTTTAGACGTGGAGATCATTTTTAACGAGCGGGGCTCCAAGGGTTTTGGGTTTGTAACTTTTGAAACTAGCTCAGATGCTGACCGAGCCCGGGAGAAGCTGAATGGCACGATCGTAGAGGGACGGAAAATTGAGGTTAACAATGCCACGGCCCGCGTCATGACCAACAAGAAGACCGGCAACCCCTACACCAATGGCTGGAAGCTAAACCCCGTGGTAGGCGCGGTCTACGGGCCTGAATTCTATGCAGTGACCGGCTTCCCCTACCCCACCACCGGCACCGCCGTCGCCTACCGGGGCGCGCACCTCCGGGGCCGGGGCCGGGCCGTGTACAACACGTTTCGGGCTGCGCCGCCTCCGCCGCCCATCCCGACTTACGGAGCGGCACTGGAGCAAACGCTTGTTAAAATGCCAGTCCCGTGGGCGGGGCTGGCACCGTGCCCCCTCCCTCCTCAGCAGACTCCGGAGCCGGCCTACCCCGCCTCTCCAGCCTTCCCACCACTCTCTTGTCCGTTTGCTTCCAGGGTCGTGTATCAGGACGGATTTTATGGTGCTGAGATTTATGGAGGCTATGCAGCCTACAGATACACTCAGCCGGCAGCGGCGGCAGCAGCGGCAGCGGCAGCAGCCTACAGTGACAGTTACGGCAGAGTCTACGCAGCCGCTGATCCCTACCATCACACCATCGGCCCTGCAGCGACCTATAGCATTGGAACCATGGCTAGCCTCTGCCGAGGAGGGTACAGTCGCTTCACCCCCTACTAG

Related Sequences

XP_004860913.1 Protein

Rbfox3 PREDICTED: RNA binding protein fox-1 homolog 3 isoform X5 [Heterocephalus glaber]

Length: 378 aa      View alignments
>XP_004860913.1
MAQPYPPAQYPPPPQNGIPTEYAPPPPHPTQDYSGQTPVAPEHGMTLYTPAQTRPEQPGAEASTQPIAGTQTVPQTDEAAQTDSQPLHPSDPTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSSDADRAREKLNGTIVEGRKIEVNNATARVMTNKKTGNPYTNGWKLNPVVGAVYGPEFYAVTGFPYPTTGTAVAYRGAHLRGRGRAVYNTFRAAPPPPPIPTYGAALEQTLVKMPVPWAGLAPCPLPPQQTPEPAYPASPAFPPLSCPFASRVVYQDGFYGAEIYGGYAAYRYTQPAAAAAAAAAAAYSDSYGRVYAAADPYHHTIGPAATYSIGTMASLCRGGYSRFTPY