Details from NCBI annotation

Gene Symbol C1qtnf1
Gene Name C1q and tumor necrosis factor related protein 1, transcript variant X1
Entrez Gene ID 101709442

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

C1QTNF1 ENSCPOG00000024414 (Guinea pig)

Gene Details

C1q and tumor necrosis factor related protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017961, Guinea pig)

Protein Percentage 91.29%
CDS Percentage 90.59%
Ka/Ks Ratio 0.1024 (Ka = 0.0432, Ks = 0.4219)

C1QTNF1 ENSG00000173918 (Human)

Gene Details

C1q and tumor necrosis factor related protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000340864, Human)

Protein Percentage 80.07%
CDS Percentage 83.75%
Ka/Ks Ratio 0.10914 (Ka = 0.0967, Ks = 0.8858)

C1qtnf1 ENSMUSG00000017446 (Mouse)

Gene Details

C1q and tumor necrosis factor related protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000017590, Mouse)

Protein Percentage 78.29%
CDS Percentage 80.55%
Ka/Ks Ratio 0.1062 (Ka = 0.12, Ks = 1.1297)

C1qtnf1 ENSRNOG00000003259 (Rat)

Gene Details

C1q and tumor necrosis factor related protein 1 (C1qtnf1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004373, Rat)

Protein Percentage 80.07%
CDS Percentage 81.73%
Ka/Ks Ratio 0.10855 (Ka = 0.1105, Ks = 1.0184)

Genome Location

Sequence Coding sequence

Length: 864 bp    Location: 8352321..8368156   Strand: +
>XM_004860844.1
ATGGGGCACCGTGGGAAGATGGGCTCCCGGGGACAGAGGCTCATGCTGGGAGGCTGCTTACTGCTGACCTTTGCCTGGGGCCCAGTGCTGAGCCATGTGCCACGAGGACAGCAGGAACGGCAGGAGCAGGAGGGGACCCAGGAGCCACCACCCCCGATGGACCACGCTGAGAGGGATGAAGAAAAACATGAGAAATACAGCCCCAACCTGGGTGAGGAGCACCCTGCTTCCGGGTGCCTTCGCTGCTGTGACCCGGGGACCCCCACGTACCAGGCGATCCCAGTGCCCCAAATCAACATCACGATCTTGAAAGGTGAGAAGGGTGACCGAGGAGATCGTGGCCTTCAAGGGAAATTCGGCAAGACAGGTTCTGTGGGTGCCAGGGGTCACATCGGACCCAAAGGGCAGAAGGGGTCCATGGGGTCCCCCGGGGACCGGTGCAAGAACCATTATGCGGCCTTCTCAGTGGGCCGGAAGAAGCCCCTTCATAGCAATGACTACTACCAGACGGTGGTCTTCGACACGGAGTTTGTGAACCTCTATGGCCACTTCAACATGTTCACAGGCAGGTTTTACTGCTACGTGCCTGGCATCTACTTCTTTAGCCTCAATGTGCACACGTGGAACCAGAAGGAGACCTACCTGCACATCATGAGGAACACGGAGGAGGTGGTGATCCTGTATGCCCAGGTGAGTGACCGCAGCATCATGCAGAGCCAGAGCTTGATGCTGGAGCTGCAGGAGCAGGACGAGGTGTGGGTGCGCCTGTTCAAGGGTGAGCGTGAGAACGCCATCTTCAGCGACGAGTTTGACACCTATGTCACCTTCAGCGGCTACCTGGTCAAGCACACTGCCGAGCCCTAG

Related Sequences

XP_004860901.1 Protein

C1qtnf1 PREDICTED: complement C1q tumor necrosis factor-related protein 1 isoform X1 [Heterocephalus glaber]

Length: 287 aa      View alignments
>XP_004860901.1
MGHRGKMGSRGQRLMLGGCLLLTFAWGPVLSHVPRGQQERQEQEGTQEPPPPMDHAERDEEKHEKYSPNLGEEHPASGCLRCCDPGTPTYQAIPVPQINITILKGEKGDRGDRGLQGKFGKTGSVGARGHIGPKGQKGSMGSPGDRCKNHYAAFSVGRKKPLHSNDYYQTVVFDTEFVNLYGHFNMFTGRFYCYVPGIYFFSLNVHTWNQKETYLHIMRNTEEVVILYAQVSDRSIMQSQSLMLELQEQDEVWVRLFKGERENAIFSDEFDTYVTFSGYLVKHTAEP