Details from NCBI annotation

Gene Symbol Pgs1
Gene Name phosphatidylglycerophosphate synthase 1, transcript variant X1
Entrez Gene ID 101704870

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PGS1 ENSCPOG00000027294 (Guinea pig)

Gene Details

phosphatidylglycerophosphate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017231, Guinea pig)

Protein Percentage 97.12%
CDS Percentage 92.07%
Ka/Ks Ratio 0.0417 (Ka = 0.0145, Ks = 0.3489)

PGS1 ENSG00000087157 (Human)

Gene Details

phosphatidylglycerophosphate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262764, Human)

Protein Percentage 95.14%
CDS Percentage 89.99%
Ka/Ks Ratio 0.04932 (Ka = 0.0236, Ks = 0.479)

Pgs1 ENSMUSG00000017715 (Mouse)

Gene Details

phosphatidylglycerophosphate synthase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000121973, Mouse)

Protein Percentage 94.58%
CDS Percentage 88.07%
Ka/Ks Ratio 0.0442 (Ka = 0.0272, Ks = 0.615)

Pgs1 ENSRNOG00000002949 (Rat)

Gene Details

Protein Pgs1; Similar to phosphatidylglycerophosphate synthase (Predicted), isoform CRA_a

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004007, Rat)

Protein Percentage 95.12%
CDS Percentage 88.25%
Ka/Ks Ratio 0.04252 (Ka = 0.0247, Ks = 0.5813)

Genome Location

Sequence Coding sequence

Length: 1671 bp    Location: 7861836..7901730   Strand: +
>XM_004860828.1
ATGGCGGCAGCGGCGGCGGCGGCGGCGGGGCCGGTGTTTTGGAGGCGGCTGCTGGGCCTCCTGCCTGGCCGCCCGGGACTAGCCGCCCTCCTGGGGCGCCTGTCTGACCGCCTCGGTAGGAACCGAGACCGCCGGCGCAGGAGGTCACCATGGCTGTTGTTGGCTCCCTTGCTGTCCCCAGCTGCCCCCCAGGTCCCTTCCCCACCTTGCTGCCTCTGTCCAGAGGGTGTACATAGGTTCCAGTGGATCCGGAACCTGGTTCCAGAGTTTGGCGTCTCCAGCTCTCACGTCAGAGTGCTCTCCTCCCCGGGAGAGTTCTTCGAACTCATGAAGGGGCAGATAAAAGTAGCCAAGAAGCGGGTTGTGATGGCGTCTCTCTATCTGGGCGTAGGACCTTTGGAACAGGAACTGGTGGATTGCCTGGAAAGTACTCTAGAAAAGTCATTGCAAGCACAATTTCCTTCTGACCTCAAGGTCTCCATTCTCCTGGACTTTACCAGGGGCTCAAGAGGCAGGAAGAACTCACGCACAATGCTGCTGCCACTCCTGCAGAGGTTTCCAGAGCAGGTCCGAGTCTCCCTCTTCCACACTCCAAATCTCCGAGGACTTCTCCGACTCCTTATCCCTGAGCGCTTCAACGAGACCATTGGCCTCCAGCACATCAAAGTATACCTCTTTGACAACAATGTTATCTTGAGTGGTGCAAACCTGAGTGACTCCTACTTCACCAATCGCCAGGACCGCTACGTGTTCTTGCAGGACTGTGCAGAGATCGCTGACTTCTTTACAGAGCTGGTGGACGCGGTGGGGGACGTGTCCCTGCAGCTGCAAGGGGACAACACTGTGCAGATGGTGGATGGGATGGTGCATCCTTACAAAGGTGACCGGGCTGCTTACTGCAAGGCGGCCAATAAGCGGGTCATGGATGTGATCCACTCAGCCAGAACACGGCAGCAGATGCTGCATGCCCAGACCTTCCATAGTGACTCCTTGTTGACCCAGGAAGAGGCAGCGGCCGCTGGTGATCGGAGACCAGCGCCTGATACCTGGATTTATCCGCTGATCCAAATGAAGCCCTTCGAGATCCAGATTGATGAGATTGTCACTGAGACCCTGCTGACTGAGGCCGAGCAAGGTGCCAGGGTCTACCTCACCACTGGCTACTTCAACCTGACCCAGGCCTACATGGACCTGGTCTTGGGCACGTGGGTCAAGTACCAGATCCTGCTGGCCTCCCCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGTGTGGCTGGTGCCATCCCAGCAGCCTATGTACACATTGAGCGGCAGTTCTACAGTGAGGTGTGCAGCCTGGGGCAGCAGGAGCGGGTCCAGCTACAGGAGTACTGGCGGAGGGGCTGGACGTTTCATGCCAAAGGCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCTCCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTGGAGGCCCAGATTGCCATCGTGACGGAGAGCCGAGCCCTGCAGCAGCAGCTCCACCAGGAGCAAGAGCAGCTCTACCTGCGCTCAGGCGTGGTGTCTTCTGCCACCTTTGAGCAGCCGAGTCGCCAGGTGAAGCTGTGGGTGAAGATGGTGACTCCTCTGATCAAGAACTTCTTCTGA

Related Sequences

XP_004860885.1 Protein

Pgs1 PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial isoform X1 [Heterocephalus glaber]

Length: 556 aa      View alignments
>XP_004860885.1
MAAAAAAAAGPVFWRRLLGLLPGRPGLAALLGRLSDRLGRNRDRRRRRSPWLLLAPLLSPAAPQVPSPPCCLCPEGVHRFQWIRNLVPEFGVSSSHVRVLSSPGEFFELMKGQIKVAKKRVVMASLYLGVGPLEQELVDCLESTLEKSLQAQFPSDLKVSILLDFTRGSRGRKNSRTMLLPLLQRFPEQVRVSLFHTPNLRGLLRLLIPERFNETIGLQHIKVYLFDNNVILSGANLSDSYFTNRQDRYVFLQDCAEIADFFTELVDAVGDVSLQLQGDNTVQMVDGMVHPYKGDRAAYCKAANKRVMDVIHSARTRQQMLHAQTFHSDSLLTQEEAAAAGDRRPAPDTWIYPLIQMKPFEIQIDEIVTETLLTEAEQGARVYLTTGYFNLTQAYMDLVLGTWVKYQILLASPEVNGFFGAKGVAGAIPAAYVHIERQFYSEVCSLGQQERVQLQEYWRRGWTFHAKGLWLYLAGSSLPCLTLIGSPNFGYRSVHRDLEAQIAIVTESRALQQQLHQEQEQLYLRSGVVSSATFEQPSRQVKLWVKMVTPLIKNFF