Sequence details NCBI ID: XM_004860818.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Afmid
Gene Name arylformamidase, transcript variant X1
Entrez Gene ID 101701788

Database interlinks

Part of NW_004624801.1 (Scaffold)

For more information consult the page for NW_004624801.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AFMID ENSCPOG00000021034 (Guinea pig)

Gene Details

arylformamidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014887, Guinea pig)

Protein Percentage 80.59%
CDS Percentage 84.21%
Ka/Ks Ratio 0.20944 (Ka = 0.1089, Ks = 0.5202)

AFMID ENSG00000183077 (Human)

Gene Details

arylformamidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000328938, Human)

Protein Percentage 71.85%
CDS Percentage 79.47%
Ka/Ks Ratio 0.33008 (Ka = 0.1838, Ks = 0.5567)

Afmid ENSMUSG00000017718 (Mouse)

Gene Details

arylformamidase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000073102, Mouse)

Protein Percentage 67.21%
CDS Percentage 76.07%
Ka/Ks Ratio 0.28009 (Ka = 0.2095, Ks = 0.7481)

Afmid ENSRNOG00000050205 (Rat)

Gene Details

arylformamidase (Afmid), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067187, Rat)

Protein Percentage 66.99%
CDS Percentage 74.51%
Ka/Ks Ratio 0.23303 (Ka = 0.2121, Ks = 0.9103)

Genome Location

Sequence Coding sequence

Length: 939 bp    Location: 7692933..7715493   Strand: +
Raw sequence   
>XM_004860818.1
ATGGACCAGCATGGAATCCCCGCGCGCGGGTCCCGGGGCCCTGGAGCCCTGGAGCCCTGGAAGGAGATGTCTGCAGAGGAGCTGGAGAAGCAGTATTCGCCCAGCAGATGGGTCGTCCGAGTGGAACCGGAGGAAGCCTTGAGGACCTTCTCGGGGAAGGGAACTGAGGCCACCAAGAATGCCCAGGCCACCAGGAGGTGCCAGCTGCACGCCCCCTACGGGGATGGCAAAGGGGACAGAATGGACATCTACTTCCCTGATGTGCAGTCAGAAGCCCTGCCTTTCTTCCTGTTTTTCCACGGAGGATACTGGCAGAGTGGAAGTAAAGACCAATCGGCCTTCATGGTCGACCCGCTGACAGCACAGGGAGTGGCCGTGGCTGTAGTGGATTACGACATCGCCCCCAAAGGGAGTCTAGACCAGATGGTAGACCAGGTGACCCGCAGCATCATGTTCATCCAGAAGCGGTATCCATGCAATGAGGGGATCTACCTGTGTGGCCACTCTGCTGGAGCCCACCTGGCCAGCATGGTGCTCCTGGCCAGCTGGACCGAGCATGGAGTTGTGCCCAACCTCAGAGGCCTTTTCCTGGTGAGCGGCATCTACGACCTGGAGCCCTTTGTACACACTTCCAACAATGCCCTTCTCCTCCTGACCCTGGAGGATGCGCTGAGGAACAGCCCACAGCAGCGCCTGGATGTGGCCCCGGCACCGCCTGCCGGTCTAGCCTGCCCTATCCTGGTGATGGTGGGTGAGCACGAGTCCCCCGAATTCCACCGCCAGTCCTGGGAGTTCTGTCAGACCCTGTGCCGAGGAGGGTGGAAAGCCTCGTTTAAAAAACTACCCGATGTGGATCACTTTAGTATTATTGAGAACCTGACCAAGAAGGACTACGTGGTAACCCAGATCATCATGAAAACAATCTCCCAGAAGTGCTGA

Related Sequences

XP_004860875.1 Protein

Afmid PREDICTED: kynurenine formamidase isoform X1 [Heterocephalus glaber]

Length: 312 aa      View alignments
>XP_004860875.1
MDQHGIPARGSRGPGALEPWKEMSAEELEKQYSPSRWVVRVEPEEALRTFSGKGTEATKNAQATRRCQLHAPYGDGKGDRMDIYFPDVQSEALPFFLFFHGGYWQSGSKDQSAFMVDPLTAQGVAVAVVDYDIAPKGSLDQMVDQVTRSIMFIQKRYPCNEGIYLCGHSAGAHLASMVLLASWTEHGVVPNLRGLFLVSGIYDLEPFVHTSNNALLLLTLEDALRNSPQQRLDVAPAPPAGLACPILVMVGEHESPEFHRQSWEFCQTLCRGGWKASFKKLPDVDHFSIIENLTKKDYVVTQIIMKTISQKC